RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 NOL10Q9BSC4 688 aaKnown RBP16.28■□□□□ 0.2
ALPK3-201ENST00000258888 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
ALPK3-201ENST00000258888 CCDC73Q6ZRK6 1079 aa16.28■□□□□ 0.2
ALPK3-201ENST00000258888 VPS37DQ86XT2 251 aa16.28■□□□□ 0.2
ALPK3-201ENST00000258888 NASPP49321 788 aaPredicted RBP16.28■□□□□ 0.2
ALPK3-201ENST00000258888 DHX16O60231 1041 aaKnown RBP16.27■□□□□ 0.2
ALPK3-201ENST00000258888 PSME1Q06323 249 aa16.27■□□□□ 0.2
ALPK3-201ENST00000258888 BCL11BQ9C0K0 894 aaPredicted RBP16.27■□□□□ 0.2
ALPK3-201ENST00000258888 SASS6Q6UVJ0 657 aa16.27■□□□□ 0.19
ALPK3-201ENST00000258888 NUTM2GQ5VZR2 741 aa16.26■□□□□ 0.19
ALPK3-201ENST00000258888 HOOK1Q9UJC3 728 aaKnown RBP16.26■□□□□ 0.19
ALPK3-201ENST00000258888 TMEM132EQ6IEE7 984 aa16.26■□□□□ 0.19
ALPK3-201ENST00000258888 WWC1Q8IX03 1113 aa16.26■□□□□ 0.19
ALPK3-201ENST00000258888 AMOTL1Q8IY63 956 aa16.26■□□□□ 0.19
ALPK3-201ENST00000258888 SETQ01105 290 aaPredicted RBP16.26■□□□□ 0.19
ALPK3-201ENST00000258888 AKNAQ7Z591 1439 aa16.26■□□□□ 0.19
ALPK3-201ENST00000258888 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
ALPK3-201ENST00000258888 TCEAL9Q9UHQ7 104 aa16.25■□□□□ 0.19
ALPK3-201ENST00000258888 UBTFL1P0CB47 393 aaPredicted RBP16.25■□□□□ 0.19
ALPK3-201ENST00000258888 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
ALPK3-201ENST00000258888 AAMPQ13685 434 aa16.25■□□□□ 0.19
ALPK3-201ENST00000258888 HSP90AB4PQ58FF6 505 aa16.24■□□□□ 0.19
ALPK3-201ENST00000258888 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
ALPK3-201ENST00000258888 PATL2C9JE40 543 aaKnown RBP16.24■□□□□ 0.19
ALPK3-201ENST00000258888 MTHFSP49914 203 aa16.24■□□□□ 0.19
ALPK3-201ENST00000258888 NEUROD6Q96NK8 337 aa16.24■□□□□ 0.19
ALPK3-201ENST00000258888 TRIM34Q9BYJ4 488 aa16.24■□□□□ 0.19
ALPK3-201ENST00000258888 CASKIN1Q8WXD9 1431 aa16.23■□□□□ 0.19
ALPK3-201ENST00000258888 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
ALPK3-201ENST00000258888 BRPF3Q9ULD4 1205 aa16.23■□□□□ 0.19
ALPK3-201ENST00000258888 MSH5O43196 834 aa16.22■□□□□ 0.19
ALPK3-201ENST00000258888 C1orf115Q9H7X2 142 aa16.22■□□□□ 0.19
ALPK3-201ENST00000258888 ARHGAP5Q13017 1502 aa16.22■□□□□ 0.19
ALPK3-201ENST00000258888 CAVIN1Q6NZI2 390 aaKnown RBP16.22■□□□□ 0.19
ALPK3-201ENST00000258888 PKNOX2Q96KN3 472 aa16.22■□□□□ 0.19
ALPK3-201ENST00000258888 RALYLQ86SE5 291 aaKnown RBP16.22■□□□□ 0.19
ALPK3-201ENST00000258888 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
ALPK3-201ENST00000258888 CCDC47Q96A33 483 aaKnown RBP16.22■□□□□ 0.19
ALPK3-201ENST00000258888 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
ALPK3-201ENST00000258888 MRE11P49959 708 aa16.21■□□□□ 0.19
ALPK3-201ENST00000258888 SAFBQ15424 915 aaKnown RBP eCLIP16.21■□□□□ 0.19
ALPK3-201ENST00000258888 RIC3Q7Z5B4 369 aa16.21■□□□□ 0.19
ALPK3-201ENST00000258888 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.18
ALPK3-201ENST00000258888 WASHC4Q2M389 1173 aa16.2■□□□□ 0.18
ALPK3-201ENST00000258888 TEX35Q5T0J7 233 aa16.2■□□□□ 0.18
ALPK3-201ENST00000258888 FSD1Q9BTV5 496 aa16.2■□□□□ 0.18
ALPK3-201ENST00000258888 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
ALPK3-201ENST00000258888 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
ALPK3-201ENST00000258888 ERICH2A1L162 156 aa16.2■□□□□ 0.18
ALPK3-201ENST00000258888 CFTRP13569 1480 aa16.2■□□□□ 0.18
ALPK3-201ENST00000258888 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
ALPK3-201ENST00000258888 MNS1Q8NEH6 495 aa16.2■□□□□ 0.18
ALPK3-201ENST00000258888 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
ALPK3-201ENST00000258888 R3HCC1Q9Y3T6 440 aaKnown RBP16.19■□□□□ 0.18
ALPK3-201ENST00000258888 KDM4AO75164 1064 aa16.19■□□□□ 0.18
ALPK3-201ENST00000258888 NLRP2Q9NX02 1062 aa16.19■□□□□ 0.18
ALPK3-201ENST00000258888 TRAK2O60296 914 aa16.19■□□□□ 0.18
ALPK3-201ENST00000258888 CYB5RLQ6IPT4 315 aa16.19■□□□□ 0.18
ALPK3-201ENST00000258888 TSR2Q969E8 191 aaKnown RBP16.19■□□□□ 0.18
ALPK3-201ENST00000258888 FYB1O15117 783 aa16.18■□□□□ 0.18
ALPK3-201ENST00000258888 CNTROBQ8N137 903 aa16.18■□□□□ 0.18
ALPK3-201ENST00000258888 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.18■□□□□ 0.18
ALPK3-201ENST00000258888 PRKAR2BP31323 418 aa16.18■□□□□ 0.18
ALPK3-201ENST00000258888 NAP1L1P55209 391 aaKnown RBP16.18■□□□□ 0.18
ALPK3-201ENST00000258888 RAPGEF4Q8WZA2 1011 aa16.18■□□□□ 0.18
ALPK3-201ENST00000258888 NEK4P51957 841 aa16.17■□□□□ 0.18
ALPK3-201ENST00000258888 EXOSC9Q06265 439 aaKnown RBP16.17■□□□□ 0.18
ALPK3-201ENST00000258888 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
ALPK3-201ENST00000258888 PDILTQ8N807 584 aa16.17■□□□□ 0.18
ALPK3-201ENST00000258888 SDF4Q9BRK5 362 aa16.17■□□□□ 0.18
ALPK3-201ENST00000258888 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
ALPK3-201ENST00000258888 NAT10Q9H0A0 1025 aaKnown RBP16.16■□□□□ 0.18
ALPK3-201ENST00000258888 SURF6O75683 361 aaKnown RBP16.16■□□□□ 0.18
ALPK3-201ENST00000258888 CTDP1Q9Y5B0 961 aaPredicted RBP16.16■□□□□ 0.18
ALPK3-201ENST00000258888 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
ALPK3-201ENST00000258888 NBPF1Q3BBV0 1214 aa16.15■□□□□ 0.18
ALPK3-201ENST00000258888 PSMA5P28066 241 aa16.15■□□□□ 0.18
ALPK3-201ENST00000258888 TRIM5Q9C035 493 aa16.15■□□□□ 0.18
ALPK3-201ENST00000258888 ARGLU1Q9NWB6 273 aaPredicted RBP16.15■□□□□ 0.18
ALPK3-201ENST00000258888 NOB1Q9ULX3 412 aaKnown RBP16.15■□□□□ 0.18
ALPK3-201ENST00000258888 FIBPO43427 364 aa16.15■□□□□ 0.18
ALPK3-201ENST00000258888 BCAR3O75815 825 aa16.15■□□□□ 0.18
ALPK3-201ENST00000258888 RABEP1Q15276 862 aa16.14■□□□□ 0.17
ALPK3-201ENST00000258888 OLFM4Q6UX06 510 aa16.14■□□□□ 0.17
ALPK3-201ENST00000258888 NLRP6P59044 892 aa16.14■□□□□ 0.17
ALPK3-201ENST00000258888 PRPF40AO75400 957 aaKnown RBP16.14■□□□□ 0.17
ALPK3-201ENST00000258888 STAC3Q96MF2 364 aa16.14■□□□□ 0.17
ALPK3-201ENST00000258888 GNAI3P08754 354 aa16.14■□□□□ 0.17
ALPK3-201ENST00000258888 TSPY26PQ9H489 355 aa16.14■□□□□ 0.17
ALPK3-201ENST00000258888 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
ALPK3-201ENST00000258888 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
ALPK3-201ENST00000258888 MBD3O95983 291 aa16.13■□□□□ 0.17
ALPK3-201ENST00000258888 RUFY1Q96T51 708 aa16.13■□□□□ 0.17
ALPK3-201ENST00000258888 MTMR7Q9Y216 660 aa16.13■□□□□ 0.17
ALPK3-201ENST00000258888 ERICH3Q5RHP9 1530 aa16.13■□□□□ 0.17
ALPK3-201ENST00000258888 CLASRPQ8N2M8 674 aaKnown RBP16.13■□□□□ 0.17
ALPK3-201ENST00000258888 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
ALPK3-201ENST00000258888 TTLL5Q6EMB2 1281 aa16.12■□□□□ 0.17
ALPK3-201ENST00000258888 SMC2O95347 1197 aa16.12■□□□□ 0.17
ALPK3-201ENST00000258888 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms