RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 RABEP1Q15276 862 aa9.89□□□□□ -0.83
DSG3-201ENST00000257189 SIN3AQ96ST3 1273 aa9.89□□□□□ -0.83
DSG3-201ENST00000257189 TRIM29Q14134 588 aa9.89□□□□□ -0.83
DSG3-201ENST00000257189 SYNE3Q6ZMZ3 975 aa9.89□□□□□ -0.83
DSG3-201ENST00000257189 DYDC1Q8WWB3 177 aa9.89□□□□□ -0.83
DSG3-201ENST00000257189 BCL11BQ9C0K0 894 aaPredicted RBP9.89□□□□□ -0.83
DSG3-201ENST00000257189 FAM107BQ9H098 131 aa9.89□□□□□ -0.83
DSG3-201ENST00000257189 APBB1O00213 710 aa9.89□□□□□ -0.83
DSG3-201ENST00000257189 ZKSCAN1P17029 563 aaPredicted RBP9.89□□□□□ -0.83
DSG3-201ENST00000257189 CCDC73Q6ZRK6 1079 aa9.89□□□□□ -0.83
DSG3-201ENST00000257189 ILDR1Q86SU0 546 aaPredicted RBP9.89□□□□□ -0.83
DSG3-201ENST00000257189 TXLNBQ8N3L3 684 aa9.89□□□□□ -0.83
DSG3-201ENST00000257189 MSH6P52701 1360 aa9.88□□□□□ -0.83
DSG3-201ENST00000257189 PCMTD1Q96MG8 357 aaPredicted RBP9.88□□□□□ -0.83
DSG3-201ENST00000257189 TERF2IPQ9NYB0 399 aa9.88□□□□□ -0.83
DSG3-201ENST00000257189 FOXD4L1Q9NU39 408 aa9.88□□□□□ -0.83
DSG3-201ENST00000257189 ZBED9Q6R2W3 1325 aa9.88□□□□□ -0.83
DSG3-201ENST00000257189 ERLIN2O94905 339 aa9.87□□□□□ -0.83
DSG3-201ENST00000257189 LTV1Q96GA3 475 aaPredicted RBP9.87□□□□□ -0.83
DSG3-201ENST00000257189 UACAQ9BZF9 1416 aa9.87□□□□□ -0.83
DSG3-201ENST00000257189 ANKRD18AQ8IVF6 992 aa9.87□□□□□ -0.83
DSG3-201ENST00000257189 GIMAP7Q8NHV1 300 aa9.87□□□□□ -0.83
DSG3-201ENST00000257189 BICD2Q8TD16 824 aa9.87□□□□□ -0.83
DSG3-201ENST00000257189 MAGI1Q96QZ7 1491 aaPredicted RBP9.87□□□□□ -0.83
DSG3-201ENST00000257189 SENP3-EIF4A1A0A087X0R7 540 aa9.87□□□□□ -0.83
DSG3-201ENST00000257189 BAG6P46379 1132 aa9.87□□□□□ -0.83
DSG3-201ENST00000257189 GOLGA6L10A6NI86 522 aa9.87□□□□□ -0.83
DSG3-201ENST00000257189 PDE4CQ08493 712 aa9.87□□□□□ -0.83
DSG3-201ENST00000257189 NFKBIBQ15653 356 aa9.87□□□□□ -0.83
DSG3-201ENST00000257189 U2AF1L5P0DN76 240 aaPredicted RBP9.86□□□□□ -0.83
DSG3-201ENST00000257189 PIP4K2AP48426 406 aaPredicted RBP9.86□□□□□ -0.83
DSG3-201ENST00000257189 U2AF1Q01081 240 aaKnown RBP eCLIP9.86□□□□□ -0.83
DSG3-201ENST00000257189 SMARCE1Q969G3 411 aa9.86□□□□□ -0.83
DSG3-201ENST00000257189 RRP1P56182 461 aaKnown RBP9.86□□□□□ -0.83
DSG3-201ENST00000257189 C1orf141Q5JVX7 400 aa9.86□□□□□ -0.83
DSG3-201ENST00000257189 KIF15Q9NS87 1388 aa9.86□□□□□ -0.83
DSG3-201ENST00000257189 PKD2Q13563 968 aa9.86□□□□□ -0.83
DSG3-201ENST00000257189 OLFM4Q6UX06 510 aa9.86□□□□□ -0.83
DSG3-201ENST00000257189 PRDM11Q9NQV5 511 aa9.86□□□□□ -0.83
DSG3-201ENST00000257189 CALCOCO1Q9P1Z2 691 aa9.86□□□□□ -0.83
DSG3-201ENST00000257189 ROCK1Q13464 1354 aa9.85□□□□□ -0.83
DSG3-201ENST00000257189 CADPS2Q86UW7 1296 aa9.85□□□□□ -0.83
DSG3-201ENST00000257189 CT47B1P0C2W7 299 aaPredicted RBP9.85□□□□□ -0.83
DSG3-201ENST00000257189 E9PSI1 815 aa9.85□□□□□ -0.83
DSG3-201ENST00000257189 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
DSG3-201ENST00000257189 DCAF11Q8TEB1 546 aa9.85□□□□□ -0.83
DSG3-201ENST00000257189 LRPPRCP42704 1394 aaKnown RBP9.85□□□□□ -0.83
DSG3-201ENST00000257189 ZNF772Q68DY9 489 aaPredicted RBP9.84□□□□□ -0.83
DSG3-201ENST00000257189 RAPGEF4Q8WZA2 1011 aa9.84□□□□□ -0.83
DSG3-201ENST00000257189 AXDND1Q5T1B0 1012 aaPredicted RBP9.84□□□□□ -0.83
DSG3-201ENST00000257189 ZKSCAN2Q63HK3 967 aa9.84□□□□□ -0.83
DSG3-201ENST00000257189 IQCEQ6IPM2 695 aa9.84□□□□□ -0.83
DSG3-201ENST00000257189 MCM2P49736 904 aa9.84□□□□□ -0.83
DSG3-201ENST00000257189 NOL8Q76FK4 1167 aaKnown RBP9.84□□□□□ -0.83
DSG3-201ENST00000257189 KIF2AO00139 706 aaPredicted RBP9.83□□□□□ -0.84
DSG3-201ENST00000257189 GPR162Q16538 588 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 CCDC112Q8NEF3 446 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 C8orf37Q96NL8 207 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 MYBBP1AQ9BQG0 1328 aaKnown RBP9.83□□□□□ -0.84
DSG3-201ENST00000257189 NUP155O75694 1391 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 ARHGAP5Q13017 1502 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 INTS3Q68E01 1043 aaKnown RBP9.83□□□□□ -0.84
DSG3-201ENST00000257189 RBM33Q96EV2 1170 aaKnown RBP9.83□□□□□ -0.84
DSG3-201ENST00000257189 TSPY26PQ9H489 355 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 SMC3Q9UQE7 1217 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 GBP3Q9H0R5 595 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 NLRP2Q9NX02 1062 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 DDX19BQ9UMR2 479 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 UHRF1BP1Q6BDS2 1440 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 TOPBP1Q92547 1522 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 WWC1Q8IX03 1113 aa9.83□□□□□ -0.84
DSG3-201ENST00000257189 LUC7LQ9NQ29 371 aaKnown RBP9.83□□□□□ -0.84
DSG3-201ENST00000257189 PLCD4Q9BRC7 762 aa9.82□□□□□ -0.84
DSG3-201ENST00000257189 EZRP15311 586 aaKnown RBP9.82□□□□□ -0.84
DSG3-201ENST00000257189 FOXD4L5Q5VV16 416 aaPredicted RBP9.82□□□□□ -0.84
DSG3-201ENST00000257189 TTC5Q8N0Z6 440 aa9.82□□□□□ -0.84
DSG3-201ENST00000257189 FOXD4L4Q8WXT5 416 aaPredicted RBP9.82□□□□□ -0.84
DSG3-201ENST00000257189 FILIP1LQ4L180 1135 aa9.82□□□□□ -0.84
DSG3-201ENST00000257189 DDX11Q96FC9 970 aa9.82□□□□□ -0.84
DSG3-201ENST00000257189 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.82□□□□□ -0.84
DSG3-201ENST00000257189 CFTRP13569 1480 aa9.82□□□□□ -0.84
DSG3-201ENST00000257189 MCTP1Q6DN14 999 aa9.81□□□□□ -0.84
DSG3-201ENST00000257189 CCAR1Q8IX12 1150 aaKnown RBP9.81□□□□□ -0.84
DSG3-201ENST00000257189 TRAK2O60296 914 aa9.81□□□□□ -0.84
DSG3-201ENST00000257189 NAP1L1P55209 391 aaKnown RBP9.81□□□□□ -0.84
DSG3-201ENST00000257189 FRAT2O75474 233 aaPredicted RBP9.81□□□□□ -0.84
DSG3-201ENST00000257189 SAFBQ15424 915 aaKnown RBP eCLIP9.81□□□□□ -0.84
DSG3-201ENST00000257189 ODF2Q5BJF6 829 aa9.81□□□□□ -0.84
DSG3-201ENST00000257189 CT47A1Q5JQC4 288 aaPredicted RBP9.81□□□□□ -0.84
DSG3-201ENST00000257189 TOM1L2Q6ZVM7 507 aa9.81□□□□□ -0.84
DSG3-201ENST00000257189 CPLX1O14810 134 aa9.81□□□□□ -0.84
DSG3-201ENST00000257189 SCAPERQ9BY12 1400 aa9.8□□□□□ -0.84
DSG3-201ENST00000257189 DENND4BO75064 1496 aaPredicted RBP9.8□□□□□ -0.84
DSG3-201ENST00000257189 PDIA4P13667 645 aaKnown RBP9.8□□□□□ -0.84
DSG3-201ENST00000257189 CTDP1Q9Y5B0 961 aaPredicted RBP9.8□□□□□ -0.84
DSG3-201ENST00000257189 CEBPAP49715 358 aaPredicted RBP9.8□□□□□ -0.84
DSG3-201ENST00000257189 ANKRD45Q5TZF3 282 aa9.8□□□□□ -0.84
DSG3-201ENST00000257189 TRIM34Q9BYJ4 488 aa9.8□□□□□ -0.84
DSG3-201ENST00000257189 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
DSG3-201ENST00000257189 PDCP20941 246 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms