RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
PDE6B-201ENST00000255622 SLFN5Q08AF3 891 aa14.66□□□□□ -0.06
PDE6B-201ENST00000255622 GGT6Q6P531 493 aa14.66□□□□□ -0.06
PDE6B-201ENST00000255622 NPC1L1Q9UHC9 1359 aa14.65□□□□□ -0.06
PDE6B-201ENST00000255622 TMEM132EQ6IEE7 984 aa14.65□□□□□ -0.06
PDE6B-201ENST00000255622 NEURL4Q96JN8 1562 aa14.64□□□□□ -0.07
PDE6B-201ENST00000255622 RRP9O43818 475 aaKnown RBP14.64□□□□□ -0.07
PDE6B-201ENST00000255622 MS4A1P11836 297 aa14.64□□□□□ -0.07
PDE6B-201ENST00000255622 NUTM2DQ5VT03 806 aaPredicted RBP14.64□□□□□ -0.07
PDE6B-201ENST00000255622 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
PDE6B-201ENST00000255622 KDM2BQ8NHM5 1336 aa14.63□□□□□ -0.07
PDE6B-201ENST00000255622 BCAR3O75815 825 aa14.63□□□□□ -0.07
PDE6B-201ENST00000255622 ZNF518AQ6AHZ1 1483 aa14.63□□□□□ -0.07
PDE6B-201ENST00000255622 PLCD3Q8N3E9 789 aa14.63□□□□□ -0.07
PDE6B-201ENST00000255622 NPATQ14207 1427 aa14.62□□□□□ -0.07
PDE6B-201ENST00000255622 NRXN1Q9ULB1 1477 aa14.62□□□□□ -0.07
PDE6B-201ENST00000255622 CENPJQ9HC77 1338 aaPredicted RBP14.62□□□□□ -0.07
PDE6B-201ENST00000255622 SLC12A5Q9H2X9 1139 aa14.62□□□□□ -0.07
PDE6B-201ENST00000255622 ADGRB3O60242 1522 aa14.62□□□□□ -0.07
PDE6B-201ENST00000255622 TRMT2AQ8IZ69 625 aaKnown RBP14.61□□□□□ -0.07
PDE6B-201ENST00000255622 USP35Q9P2H5 1018 aa14.61□□□□□ -0.07
PDE6B-201ENST00000255622 FRMPD1Q5SYB0 1578 aa14.6□□□□□ -0.07
PDE6B-201ENST00000255622 CANXP27824 592 aaKnown RBP14.6□□□□□ -0.07
PDE6B-201ENST00000255622 NSD3Q9BZ95 1437 aa14.6□□□□□ -0.07
PDE6B-201ENST00000255622 MYO3AQ8NEV4 1616 aa14.59□□□□□ -0.07
PDE6B-201ENST00000255622 LMTK2Q8IWU2 1503 aa14.59□□□□□ -0.07
PDE6B-201ENST00000255622 NEUROD2Q15784 382 aa14.59□□□□□ -0.07
PDE6B-201ENST00000255622 NKTRP30414 1462 aaKnown RBP14.59□□□□□ -0.07
PDE6B-201ENST00000255622 RRP7AQ9Y3A4 280 aaKnown RBP14.58□□□□□ -0.07
PDE6B-201ENST00000255622 CD109Q6YHK3 1445 aa14.58□□□□□ -0.08
PDE6B-201ENST00000255622 QRICH2Q9H0J4 1663 aa14.58□□□□□ -0.08
PDE6B-201ENST00000255622 POGZQ7Z3K3 1410 aa14.57□□□□□ -0.08
PDE6B-201ENST00000255622 PPLO60437 1756 aa14.57□□□□□ -0.08
PDE6B-201ENST00000255622 CENPQQ7L2Z9 268 aaPredicted RBP14.57□□□□□ -0.08
PDE6B-201ENST00000255622 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.57□□□□□ -0.08
PDE6B-201ENST00000255622 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
PDE6B-201ENST00000255622 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
PDE6B-201ENST00000255622 MORC1Q86VD1 984 aa14.57□□□□□ -0.08
PDE6B-201ENST00000255622 RAPGEF3O95398 923 aa14.56□□□□□ -0.08
PDE6B-201ENST00000255622 C14orf93Q9H972 538 aaKnown RBP14.56□□□□□ -0.08
PDE6B-201ENST00000255622 ADGRB1O14514 1584 aa14.56□□□□□ -0.08
PDE6B-201ENST00000255622 GTF2E1P29083 439 aaPredicted RBP14.56□□□□□ -0.08
PDE6B-201ENST00000255622 FAM43AQ8N2R8 423 aa14.56□□□□□ -0.08
PDE6B-201ENST00000255622 SBNO2Q9Y2G9 1366 aa14.56□□□□□ -0.08
PDE6B-201ENST00000255622 E9PSI1 815 aa14.56□□□□□ -0.08
PDE6B-201ENST00000255622 ZC3H13Q5T200 1668 aaKnown RBP14.55□□□□□ -0.08
PDE6B-201ENST00000255622 SETBP1Q9Y6X0 1596 aa14.55□□□□□ -0.08
PDE6B-201ENST00000255622 WWC1Q8IX03 1113 aa14.55□□□□□ -0.08
PDE6B-201ENST00000255622 ZFP91Q96JP5 570 aaPredicted RBP14.55□□□□□ -0.08
PDE6B-201ENST00000255622 SAFB2Q14151 953 aaKnown RBP eCLIP14.54□□□□□ -0.08
PDE6B-201ENST00000255622 SHPRHQ149N8 1683 aa14.54□□□□□ -0.08
PDE6B-201ENST00000255622 POLR3AO14802 1390 aaPredicted RBP14.54□□□□□ -0.08
PDE6B-201ENST00000255622 HECW2Q9P2P5 1572 aa14.54□□□□□ -0.08
PDE6B-201ENST00000255622 SIGLEC1Q9BZZ2 1709 aa14.53□□□□□ -0.08
PDE6B-201ENST00000255622 ABCC3O15438 1527 aa14.53□□□□□ -0.08
PDE6B-201ENST00000255622 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
PDE6B-201ENST00000255622 HOMEZQ8IX15 550 aa14.53□□□□□ -0.08
PDE6B-201ENST00000255622 MLH3Q9UHC1 1453 aa14.52□□□□□ -0.09
PDE6B-201ENST00000255622 GSE1Q14687 1217 aa14.52□□□□□ -0.09
PDE6B-201ENST00000255622 C8orf34Q49A92 452 aa14.52□□□□□ -0.09
PDE6B-201ENST00000255622 PANK1Q8TE04 598 aa14.52□□□□□ -0.09
PDE6B-201ENST00000255622 MTHFSP49914 203 aa14.51□□□□□ -0.09
PDE6B-201ENST00000255622 IGHDP01880 384 aa14.51□□□□□ -0.09
PDE6B-201ENST00000255622 C14orf37Q86TY3 774 aa14.5□□□□□ -0.09
PDE6B-201ENST00000255622 TCP11L2Q8N4U5 519 aa14.5□□□□□ -0.09
PDE6B-201ENST00000255622 FRAT1Q92837 279 aaPredicted RBP14.5□□□□□ -0.09
PDE6B-201ENST00000255622 CABP2Q9NPB3 220 aa14.5□□□□□ -0.09
PDE6B-201ENST00000255622 GLI2P10070 1586 aa14.5□□□□□ -0.09
PDE6B-201ENST00000255622 IPO4Q8TEX9 1081 aaKnown RBP14.5□□□□□ -0.09
PDE6B-201ENST00000255622 COG6Q9Y2V7 657 aa14.5□□□□□ -0.09
PDE6B-201ENST00000255622 CAMSAP1Q5T5Y3 1602 aa14.5□□□□□ -0.09
PDE6B-201ENST00000255622 BCL2L13Q9BXK5 485 aa14.49□□□□□ -0.09
PDE6B-201ENST00000255622 TULP4Q9NRJ4 1543 aa14.48□□□□□ -0.09
PDE6B-201ENST00000255622 FAM161AQ3B820 660 aa14.48□□□□□ -0.09
PDE6B-201ENST00000255622 STK26Q9P289 416 aa14.48□□□□□ -0.09
PDE6B-201ENST00000255622 PRDM4Q9UKN5 801 aa14.48□□□□□ -0.09
PDE6B-201ENST00000255622 TNNQ9UQP3 1299 aa14.48□□□□□ -0.09
PDE6B-201ENST00000255622 CFAP74Q9C0B2 1584 aa14.48□□□□□ -0.09
PDE6B-201ENST00000255622 RUNDC1Q96C34 613 aa14.48□□□□□ -0.09
PDE6B-201ENST00000255622 CGNL1Q0VF96 1302 aa14.48□□□□□ -0.09
PDE6B-201ENST00000255622 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
PDE6B-201ENST00000255622 IQSEC2Q5JU85 1478 aa14.47□□□□□ -0.09
PDE6B-201ENST00000255622 ARHGEF28Q8N1W1 1705 aaKnown RBP14.47□□□□□ -0.09
PDE6B-201ENST00000255622 NEXMIFQ5QGS0 1516 aa14.46□□□□□ -0.09
PDE6B-201ENST00000255622 RPGRIP1LQ68CZ1 1315 aa14.46□□□□□ -0.09
PDE6B-201ENST00000255622 IDI1Q13907 227 aa14.46□□□□□ -0.09
PDE6B-201ENST00000255622 EVC2Q86UK5 1308 aa14.45□□□□□ -0.1
PDE6B-201ENST00000255622 VGLL3A8MV65 326 aa14.45□□□□□ -0.1
PDE6B-201ENST00000255622 RARSP54136 660 aaKnown RBP14.44□□□□□ -0.1
PDE6B-201ENST00000255622 DDRGK1Q96HY6 314 aa14.44□□□□□ -0.1
PDE6B-201ENST00000255622 PIK3C2BO00750 1634 aa14.44□□□□□ -0.1
PDE6B-201ENST00000255622 VGFO15240 615 aaPredicted RBP14.44□□□□□ -0.1
PDE6B-201ENST00000255622 RLBP1P12271 317 aa14.44□□□□□ -0.1
PDE6B-201ENST00000255622 CLUAP1Q96AJ1 413 aa14.44□□□□□ -0.1
PDE6B-201ENST00000255622 DIP2CQ9Y2E4 1556 aa14.44□□□□□ -0.1
PDE6B-201ENST00000255622 U2AF1L5P0DN76 240 aaPredicted RBP14.44□□□□□ -0.1
PDE6B-201ENST00000255622 U2AF1Q01081 240 aaKnown RBP eCLIP14.44□□□□□ -0.1
PDE6B-201ENST00000255622 NGEFQ8N5V2 710 aa14.44□□□□□ -0.1
PDE6B-201ENST00000255622 PDE3AQ14432 1141 aa14.43□□□□□ -0.1
PDE6B-201ENST00000255622 PNNQ9H307 717 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms