RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 FOXD4L1Q9NU39 408 aa17.45■□□□□ 0.38
ZC3H4-201ENST00000253048 RAD54L2Q9Y4B4 1467 aa17.45■□□□□ 0.38
ZC3H4-201ENST00000253048 BICDL1Q6ZP65 573 aa17.45■□□□□ 0.38
ZC3H4-201ENST00000253048 BCL2L13Q9BXK5 485 aa17.45■□□□□ 0.38
ZC3H4-201ENST00000253048 ODF2Q5BJF6 829 aa17.45■□□□□ 0.38
ZC3H4-201ENST00000253048 SYNJ2O15056 1496 aa17.45■□□□□ 0.38
ZC3H4-201ENST00000253048 MPHOSPH10O00566 681 aaKnown RBP17.45■□□□□ 0.38
ZC3H4-201ENST00000253048 FGD5Q6ZNL6 1462 aa17.45■□□□□ 0.38
ZC3H4-201ENST00000253048 ANKRD20A12PQ8NF67 263 aa17.44■□□□□ 0.38
ZC3H4-201ENST00000253048 ERC2O15083 957 aa17.44■□□□□ 0.38
ZC3H4-201ENST00000253048 GNAI1P63096 354 aa17.44■□□□□ 0.38
ZC3H4-201ENST00000253048 MYBBP1AQ9BQG0 1328 aaKnown RBP17.44■□□□□ 0.38
ZC3H4-201ENST00000253048 TMEM132EQ6IEE7 984 aa17.44■□□□□ 0.38
ZC3H4-201ENST00000253048 TMOD2Q9NZR1 351 aa17.44■□□□□ 0.38
ZC3H4-201ENST00000253048 CT47A1Q5JQC4 288 aaPredicted RBP17.44■□□□□ 0.38
ZC3H4-201ENST00000253048 ZSCAN29Q8IWY8 852 aaPredicted RBP17.43■□□□□ 0.38
ZC3H4-201ENST00000253048 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
ZC3H4-201ENST00000253048 FOXD4L5Q5VV16 416 aaPredicted RBP17.43■□□□□ 0.38
ZC3H4-201ENST00000253048 FOXD4L4Q8WXT5 416 aaPredicted RBP17.43■□□□□ 0.38
ZC3H4-201ENST00000253048 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
ZC3H4-201ENST00000253048 HOOK1Q9UJC3 728 aaKnown RBP17.43■□□□□ 0.38
ZC3H4-201ENST00000253048 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
ZC3H4-201ENST00000253048 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
ZC3H4-201ENST00000253048 E9PSI1 815 aa17.42■□□□□ 0.38
ZC3H4-201ENST00000253048 C16orf71Q8IYS4 520 aaPredicted RBP17.42■□□□□ 0.38
ZC3H4-201ENST00000253048 STAC3Q96MF2 364 aa17.42■□□□□ 0.38
ZC3H4-201ENST00000253048 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
ZC3H4-201ENST00000253048 MYOM3Q5VTT5 1437 aa17.42■□□□□ 0.38
ZC3H4-201ENST00000253048 XBP1P17861 261 aa17.41■□□□□ 0.38
ZC3H4-201ENST00000253048 SART3Q15020 963 aaKnown RBP17.41■□□□□ 0.38
ZC3H4-201ENST00000253048 ZPR1O75312 459 aa17.4■□□□□ 0.38
ZC3H4-201ENST00000253048 PHF14O94880 888 aa17.4■□□□□ 0.38
ZC3H4-201ENST00000253048 SLC26A8Q96RN1 970 aa17.4■□□□□ 0.38
ZC3H4-201ENST00000253048 XPCQ01831 940 aaPredicted RBP17.4■□□□□ 0.38
ZC3H4-201ENST00000253048 TTC39AQ5SRH9 613 aa17.4■□□□□ 0.38
ZC3H4-201ENST00000253048 ATP6V1DQ9Y5K8 247 aa17.4■□□□□ 0.38
ZC3H4-201ENST00000253048 UBTFL1P0CB47 393 aaPredicted RBP17.39■□□□□ 0.37
ZC3H4-201ENST00000253048 CALRP27797 417 aaKnown RBP17.39■□□□□ 0.37
ZC3H4-201ENST00000253048 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
ZC3H4-201ENST00000253048 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
ZC3H4-201ENST00000253048 MPHOSPH8Q99549 860 aa17.38■□□□□ 0.37
ZC3H4-201ENST00000253048 CCDC30Q5VVM6 783 aa17.38■□□□□ 0.37
ZC3H4-201ENST00000253048 IBSPP21815 317 aaPredicted RBP17.37■□□□□ 0.37
ZC3H4-201ENST00000253048 SLKQ9H2G2 1235 aaPredicted RBP17.37■□□□□ 0.37
ZC3H4-201ENST00000253048 UBAP1LF5GYI3 381 aa17.37■□□□□ 0.37
ZC3H4-201ENST00000253048 EPS15P42566 896 aa17.37■□□□□ 0.37
ZC3H4-201ENST00000253048 BCL11BQ9C0K0 894 aaPredicted RBP17.37■□□□□ 0.37
ZC3H4-201ENST00000253048 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
ZC3H4-201ENST00000253048 IPO7O95373 1038 aaKnown RBP17.36■□□□□ 0.37
ZC3H4-201ENST00000253048 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
ZC3H4-201ENST00000253048 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
ZC3H4-201ENST00000253048 MTHFSP49914 203 aa17.36■□□□□ 0.37
ZC3H4-201ENST00000253048 CCDC158Q5M9N0 1113 aa17.36■□□□□ 0.37
ZC3H4-201ENST00000253048 TMEM87AQ8NBN3 555 aa17.35■□□□□ 0.37
ZC3H4-201ENST00000253048 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
ZC3H4-201ENST00000253048 ZFYVE27Q5T4F4 411 aa17.35■□□□□ 0.37
ZC3H4-201ENST00000253048 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
ZC3H4-201ENST00000253048 GOLGA6L19H0YKK7 550 aa17.35■□□□□ 0.37
ZC3H4-201ENST00000253048 ZNF652Q9Y2D9 606 aa17.35■□□□□ 0.37
ZC3H4-201ENST00000253048 TOM1O60784 492 aa17.34■□□□□ 0.37
ZC3H4-201ENST00000253048 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
ZC3H4-201ENST00000253048 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
ZC3H4-201ENST00000253048 BECN2A8MW95 431 aa17.34■□□□□ 0.37
ZC3H4-201ENST00000253048 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
ZC3H4-201ENST00000253048 RUNDC1Q96C34 613 aa17.34■□□□□ 0.37
ZC3H4-201ENST00000253048 SETQ01105 290 aaPredicted RBP17.33■□□□□ 0.37
ZC3H4-201ENST00000253048 DNAJC2Q99543 621 aaKnown RBP17.33■□□□□ 0.37
ZC3H4-201ENST00000253048 DDX19BQ9UMR2 479 aa17.33■□□□□ 0.37
ZC3H4-201ENST00000253048 CCDC70Q6NSX1 233 aa17.33■□□□□ 0.37
ZC3H4-201ENST00000253048 CDK5RAP3Q96JB5 506 aa17.33■□□□□ 0.37
ZC3H4-201ENST00000253048 ZC3H6P61129 1189 aaKnown RBP17.33■□□□□ 0.36
ZC3H4-201ENST00000253048 PNISRQ8TF01 805 aaKnown RBP17.33■□□□□ 0.36
ZC3H4-201ENST00000253048 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.32■□□□□ 0.36
ZC3H4-201ENST00000253048 USP47Q96K76 1375 aa17.32■□□□□ 0.36
ZC3H4-201ENST00000253048 REC8O95072 547 aa17.32■□□□□ 0.36
ZC3H4-201ENST00000253048 RRP12Q5JTH9 1297 aaKnown RBP17.32■□□□□ 0.36
ZC3H4-201ENST00000253048 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.32■□□□□ 0.36
ZC3H4-201ENST00000253048 GZF1Q9H116 711 aaPredicted RBP17.32■□□□□ 0.36
ZC3H4-201ENST00000253048 PPP6R1Q9UPN7 881 aa17.32■□□□□ 0.36
ZC3H4-201ENST00000253048 FOSBP53539 338 aa17.31■□□□□ 0.36
ZC3H4-201ENST00000253048 SCAPERQ9BY12 1400 aa17.31■□□□□ 0.36
ZC3H4-201ENST00000253048 STARD3NLO95772 234 aa17.31■□□□□ 0.36
ZC3H4-201ENST00000253048 SLC52A1Q9NWF4 448 aa17.3■□□□□ 0.36
ZC3H4-201ENST00000253048 APAF1O14727 1248 aa17.3■□□□□ 0.36
ZC3H4-201ENST00000253048 CDK19Q9BWU1 502 aa17.3■□□□□ 0.36
ZC3H4-201ENST00000253048 KRT18P05783 430 aaKnown RBP17.3■□□□□ 0.36
ZC3H4-201ENST00000253048 FSD1Q9BTV5 496 aa17.3■□□□□ 0.36
ZC3H4-201ENST00000253048 NINLQ9Y2I6 1382 aa17.3■□□□□ 0.36
ZC3H4-201ENST00000253048 ZNF219Q9P2Y4 722 aaPredicted RBP17.29■□□□□ 0.36
ZC3H4-201ENST00000253048 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
ZC3H4-201ENST00000253048 TMOD3Q9NYL9 352 aa17.29■□□□□ 0.36
ZC3H4-201ENST00000253048 KDM4AO75164 1064 aa17.29■□□□□ 0.36
ZC3H4-201ENST00000253048 MYL6BP14649 208 aa17.29■□□□□ 0.36
ZC3H4-201ENST00000253048 PATL2C9JE40 543 aaKnown RBP17.28■□□□□ 0.36
ZC3H4-201ENST00000253048 GRM1Q13255 1194 aa17.28■□□□□ 0.36
ZC3H4-201ENST00000253048 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
ZC3H4-201ENST00000253048 CHMP4BP1P59074 171 aa17.28■□□□□ 0.36
ZC3H4-201ENST00000253048 CCDC57Q2TAC2 916 aa17.28■□□□□ 0.36
ZC3H4-201ENST00000253048 FOXD4L6Q3SYB3 417 aaPredicted RBP17.28■□□□□ 0.36
ZC3H4-201ENST00000253048 FOXD4L3Q6VB84 417 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms