RNA–Protein interactions for RNA: ENST00000252809.3

GDF15-201, Transcript of growth differentiation factor 15, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF15, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-201ENST00000252809 PLEKHH1Q9ULM0 1364 aa28.82■■■□□ 2.2
GDF15-201ENST00000252809 CDC42BPGQ6DT37 1551 aa28.82■■■□□ 2.2
GDF15-201ENST00000252809 WAPLQ7Z5K2 1190 aa28.81■■■□□ 2.2
GDF15-201ENST00000252809 CADPS2Q86UW7 1296 aa28.81■■■□□ 2.2
GDF15-201ENST00000252809 TOM1O60784 492 aa28.8■■■□□ 2.2
GDF15-201ENST00000252809 ADGRB2O60241 1585 aa28.79■■■□□ 2.2
GDF15-201ENST00000252809 ATF3P18847 181 aa28.79■■■□□ 2.2
GDF15-201ENST00000252809 CENPJQ9HC77 1338 aaPredicted RBP28.76■■■□□ 2.19
GDF15-201ENST00000252809 QRICH2Q9H0J4 1663 aa28.75■■■□□ 2.19
GDF15-201ENST00000252809 UBAP1LF5GYI3 381 aa28.75■■■□□ 2.19
GDF15-201ENST00000252809 SAFB2Q14151 953 aaKnown RBP eCLIP28.74■■■□□ 2.19
GDF15-201ENST00000252809 USP47Q96K76 1375 aa28.7■■■□□ 2.18
GDF15-201ENST00000252809 MINK1Q8N4C8 1332 aaPredicted RBP28.69■■■□□ 2.18
GDF15-201ENST00000252809 SBNO2Q9Y2G9 1366 aa28.68■■■□□ 2.18
GDF15-201ENST00000252809 FMN2Q9NZ56 1722 aa28.68■■■□□ 2.18
GDF15-201ENST00000252809 MST1RQ04912 1400 aa28.68■■■□□ 2.18
GDF15-201ENST00000252809 FBXO41Q8TF61 875 aa28.67■■■□□ 2.18
GDF15-201ENST00000252809 SLAIN2Q9P270 581 aa28.65■■■□□ 2.18
GDF15-201ENST00000252809 SLC24A1O60721 1099 aa28.64■■■□□ 2.18
GDF15-201ENST00000252809 ZEB1P37275 1124 aaPredicted RBP28.64■■■□□ 2.18
GDF15-201ENST00000252809 HIRIP3Q9BW71 556 aaPredicted RBP28.63■■■□□ 2.17
GDF15-201ENST00000252809 TULP4Q9NRJ4 1543 aa28.63■■■□□ 2.17
GDF15-201ENST00000252809 ANKARQ7Z5J8 1434 aa28.62■■■□□ 2.17
GDF15-201ENST00000252809 C1orf167Q5SNV9 1468 aa28.62■■■□□ 2.17
GDF15-201ENST00000252809 WASLO00401 505 aaPredicted RBP28.61■■■□□ 2.17
GDF15-201ENST00000252809 SCAF1Q9H7N4 1312 aaKnown RBP28.61■■■□□ 2.17
GDF15-201ENST00000252809 PIP4K2BP78356 416 aa28.6■■■□□ 2.17
GDF15-201ENST00000252809 ROBO1Q9Y6N7 1651 aa28.6■■■□□ 2.17
GDF15-201ENST00000252809 EVC2Q86UK5 1308 aa28.59■■■□□ 2.17
GDF15-201ENST00000252809 ST20-MTHFSA0A0A6YYL1 179 aa28.57■■■□□ 2.16
GDF15-201ENST00000252809 EIF4G2P78344 907 aaKnown RBP eCLIP28.57■■■□□ 2.16
GDF15-201ENST00000252809 ITSN1Q15811 1721 aa28.55■■■□□ 2.16
GDF15-201ENST00000252809 ILDR1Q86SU0 546 aaPredicted RBP28.55■■■□□ 2.16
GDF15-201ENST00000252809 KIF1AQ12756 1690 aa28.54■■■□□ 2.16
GDF15-201ENST00000252809 CDK19Q9BWU1 502 aa28.53■■■□□ 2.16
GDF15-201ENST00000252809 ATP7BP35670 1465 aa28.53■■■□□ 2.16
GDF15-201ENST00000252809 USP32Q8NFA0 1604 aa28.52■■■□□ 2.16
GDF15-201ENST00000252809 SRPK2P78362 688 aaKnown RBP28.52■■■□□ 2.16
GDF15-201ENST00000252809 NUTM2FA1L443 756 aa28.5■■■□□ 2.15
GDF15-201ENST00000252809 BRINP3Q76B58 766 aa28.5■■■□□ 2.15
GDF15-201ENST00000252809 ESCO1Q5FWF5 840 aa28.49■■■□□ 2.15
GDF15-201ENST00000252809 TESK2Q96S53 571 aa28.49■■■□□ 2.15
GDF15-201ENST00000252809 ATAD2Q6PL18 1390 aa28.48■■■□□ 2.15
GDF15-201ENST00000252809 TOPAZ1Q8N9V7 1692 aa28.48■■■□□ 2.15
GDF15-201ENST00000252809 AHDC1Q5TGY3 1603 aaPredicted RBP28.47■■■□□ 2.15
GDF15-201ENST00000252809 TMF1P82094 1093 aa28.47■■■□□ 2.15
GDF15-201ENST00000252809 NHSL1Q5SYE7 1610 aa28.47■■■□□ 2.15
GDF15-201ENST00000252809 RGPD8O14715 1765 aaPredicted RBP28.46■■■□□ 2.15
GDF15-201ENST00000252809 NUDT16Q96DE0 195 aaKnown RBP28.45■■■□□ 2.14
GDF15-201ENST00000252809 PRR36Q9H6K5 1346 aa28.44■■■□□ 2.14
GDF15-201ENST00000252809 HSPA5P11021 654 aaKnown RBP28.44■■■□□ 2.14
GDF15-201ENST00000252809 CDCA8Q53HL2 280 aa28.44■■■□□ 2.14
GDF15-201ENST00000252809 PUS7Q96PZ0 661 aaKnown RBP28.44■■■□□ 2.14
GDF15-201ENST00000252809 ORAI2Q96SN7 254 aa28.44■■■□□ 2.14
GDF15-201ENST00000252809 CCDC61Q9Y6R9 512 aa28.44■■■□□ 2.14
GDF15-201ENST00000252809 CABP2Q9NPB3 220 aa28.43■■■□□ 2.14
GDF15-201ENST00000252809 NPHP3Q7Z494 1330 aa28.43■■■□□ 2.14
GDF15-201ENST00000252809 PHF8Q9UPP1 1060 aa28.42■■■□□ 2.14
GDF15-201ENST00000252809 PHLPP1O60346 1717 aa28.42■■■□□ 2.14
GDF15-201ENST00000252809 PPIP5K1Q6PFW1 1433 aa28.39■■■□□ 2.14
GDF15-201ENST00000252809 DISP3Q9P2K9 1392 aa28.37■■■□□ 2.13
GDF15-201ENST00000252809 NINLQ9Y2I6 1382 aa28.37■■■□□ 2.13
GDF15-201ENST00000252809 COL16A1Q07092 1604 aaPredicted RBP28.36■■■□□ 2.13
GDF15-201ENST00000252809 PLEKHG3A1L390 1219 aa28.34■■■□□ 2.13
GDF15-201ENST00000252809 FOXO3O43524 673 aa28.33■■■□□ 2.13
GDF15-201ENST00000252809 HSPA1LP34931 641 aa28.33■■■□□ 2.13
GDF15-201ENST00000252809 NGDNQ8NEJ9 315 aaKnown RBP28.33■■■□□ 2.13
GDF15-201ENST00000252809 PMFBP1Q8TBY8 1022 aa28.33■■■□□ 2.13
GDF15-201ENST00000252809 POLR3AO14802 1390 aaPredicted RBP28.32■■■□□ 2.12
GDF15-201ENST00000252809 PXDNQ92626 1479 aa28.32■■■□□ 2.12
GDF15-201ENST00000252809 SOS2Q07890 1332 aaPredicted RBP28.31■■■□□ 2.12
GDF15-201ENST00000252809 PSME1Q06323 249 aa28.29■■■□□ 2.12
GDF15-201ENST00000252809 CABP1Q9NZU7 370 aa28.28■■■□□ 2.12
GDF15-201ENST00000252809 ACEP12821 1306 aa28.27■■■□□ 2.12
GDF15-201ENST00000252809 DDX17Q92841 729 aaKnown RBP28.27■■■□□ 2.12
GDF15-201ENST00000252809 TMC1Q8TDI8 760 aa28.26■■■□□ 2.11
GDF15-201ENST00000252809 LRRC59Q96AG4 307 aaKnown RBP28.26■■■□□ 2.11
GDF15-201ENST00000252809 SBNO1A3KN83 1393 aa28.25■■■□□ 2.11
GDF15-201ENST00000252809 BRD4O60885 1362 aaPredicted RBP28.25■■■□□ 2.11
GDF15-201ENST00000252809 KRT28Q7Z3Y7 464 aa28.25■■■□□ 2.11
GDF15-201ENST00000252809 AKAP12Q02952 1782 aa28.24■■■□□ 2.11
GDF15-201ENST00000252809 JCADQ9P266 1359 aa28.24■■■□□ 2.11
GDF15-201ENST00000252809 ZNF692Q9BU19 519 aaPredicted RBP28.23■■■□□ 2.11
GDF15-201ENST00000252809 SHPRHQ149N8 1683 aa28.23■■■□□ 2.11
GDF15-201ENST00000252809 TNS3Q68CZ2 1445 aa28.22■■■□□ 2.11
GDF15-201ENST00000252809 HDGFL2Q7Z4V5 671 aaPredicted RBP28.22■■■□□ 2.11
GDF15-201ENST00000252809 TRPM3Q9HCF6 1732 aaPredicted RBP28.22■■■□□ 2.11
GDF15-201ENST00000252809 TERF2IPQ9NYB0 399 aa28.22■■■□□ 2.11
GDF15-201ENST00000252809 USP6P35125 1406 aa28.21■■■□□ 2.11
GDF15-201ENST00000252809 XPCQ01831 940 aaPredicted RBP28.21■■■□□ 2.11
GDF15-201ENST00000252809 MYOM1P52179 1685 aa28.2■■■□□ 2.11
GDF15-201ENST00000252809 CPSF1Q10570 1443 aaKnown RBP28.2■■■□□ 2.11
GDF15-201ENST00000252809 MON2Q7Z3U7 1717 aa28.2■■■□□ 2.1
GDF15-201ENST00000252809 ARHGEF10O15013 1369 aa28.19■■■□□ 2.1
GDF15-201ENST00000252809 POLR3GLQ9BT43 218 aa28.18■■■□□ 2.1
GDF15-201ENST00000252809 SLC12A5Q9H2X9 1139 aa28.18■■■□□ 2.1
GDF15-201ENST00000252809 ANKRD36BQ8N2N9 1353 aa28.18■■■□□ 2.1
GDF15-201ENST00000252809 SPATA31A3Q5VYP0 1347 aa28.18■■■□□ 2.1
GDF15-201ENST00000252809 CD163L1Q9NR16 1453 aa28.17■■■□□ 2.1
GDF15-201ENST00000252809 KTN1Q86UP2 1357 aaKnown RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms