RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PHRF1Q9P1Y6 1649 aaKnown RBP5.54□□□□□ -1.52
UBE4A-201ENST00000252108 CFAP65Q6ZU64 1925 aaKnown RBP5.54□□□□□ -1.52
UBE4A-201ENST00000252108 PEAK1Q9H792 1746 aa5.53□□□□□ -1.52
UBE4A-201ENST00000252108 A0A0G2JS52 829 aa5.53□□□□□ -1.52
UBE4A-201ENST00000252108 DCAF8L1A6NGE4 600 aa5.53□□□□□ -1.52
UBE4A-201ENST00000252108 MRS2Q9HD23 443 aa5.53□□□□□ -1.52
UBE4A-201ENST00000252108 ZBTB47Q9UFB7 747 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-201ENST00000252108 FMN2Q9NZ56 1722 aa5.53□□□□□ -1.52
UBE4A-201ENST00000252108 DDRGK1Q96HY6 314 aa5.52□□□□□ -1.53
UBE4A-201ENST00000252108 RPGRIP1LQ68CZ1 1315 aa5.52□□□□□ -1.53
UBE4A-201ENST00000252108 PRKCSHP14314 528 aaPredicted RBP5.52□□□□□ -1.53
UBE4A-201ENST00000252108 ZNF142P52746 1687 aaPredicted RBP5.52□□□□□ -1.53
UBE4A-201ENST00000252108 ABCC11Q96J66 1382 aa5.52□□□□□ -1.53
UBE4A-201ENST00000252108 PDE3BQ13370 1112 aa5.52□□□□□ -1.53
UBE4A-201ENST00000252108 CPSF1Q10570 1443 aaKnown RBP5.51□□□□□ -1.53
UBE4A-201ENST00000252108 YTHDC2Q9H6S0 1430 aaKnown RBP5.51□□□□□ -1.53
UBE4A-201ENST00000252108 CAMTA1Q9Y6Y1 1673 aa5.51□□□□□ -1.53
UBE4A-201ENST00000252108 PPM1GO15355 546 aaPredicted RBP5.51□□□□□ -1.53
UBE4A-201ENST00000252108 SLC24A1O60721 1099 aa5.51□□□□□ -1.53
UBE4A-201ENST00000252108 PPP2R1AP30153 589 aa5.51□□□□□ -1.53
UBE4A-201ENST00000252108 DUSP27Q5VZP5 1158 aa5.51□□□□□ -1.53
UBE4A-201ENST00000252108 CCDC136Q96JN2 1154 aa5.51□□□□□ -1.53
UBE4A-201ENST00000252108 ITSN1Q15811 1721 aa5.51□□□□□ -1.53
UBE4A-201ENST00000252108 NOP58Q9Y2X3 529 aaKnown RBP5.51□□□□□ -1.53
UBE4A-201ENST00000252108 ARHGAP23Q9P227 1491 aa5.51□□□□□ -1.53
UBE4A-201ENST00000252108 SLIT1O75093 1534 aa5.51□□□□□ -1.53
UBE4A-201ENST00000252108 CRYBG1Q9Y4K1 1723 aa5.51□□□□□ -1.53
UBE4A-201ENST00000252108 MAP2P11137 1827 aaKnown RBP5.51□□□□□ -1.53
UBE4A-201ENST00000252108 PPIP5K1Q6PFW1 1433 aa5.51□□□□□ -1.53
UBE4A-201ENST00000252108 DIP2AQ14689 1571 aa5.5□□□□□ -1.53
UBE4A-201ENST00000252108 SSH2Q76I76 1423 aa5.5□□□□□ -1.53
UBE4A-201ENST00000252108 TRHP20396 242 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-201ENST00000252108 PANK3Q9H999 370 aa5.5□□□□□ -1.53
UBE4A-201ENST00000252108 ADAMTS7Q9UKP4 1686 aa5.5□□□□□ -1.53
UBE4A-201ENST00000252108 ATP7BP35670 1465 aa5.5□□□□□ -1.53
UBE4A-201ENST00000252108 NSD2O96028 1365 aa5.49□□□□□ -1.53
UBE4A-201ENST00000252108 ANKRD36BQ8N2N9 1353 aa5.49□□□□□ -1.53
UBE4A-201ENST00000252108 RRP1P56182 461 aaKnown RBP5.49□□□□□ -1.53
UBE4A-201ENST00000252108 SPINK5Q9NQ38 1064 aaPredicted RBP5.49□□□□□ -1.53
UBE4A-201ENST00000252108 EIF3AQ14152 1382 aaKnown RBP5.49□□□□□ -1.53
UBE4A-201ENST00000252108 ZMYM3Q14202 1370 aa5.49□□□□□ -1.53
UBE4A-201ENST00000252108 NINLQ9Y2I6 1382 aa5.49□□□□□ -1.53
UBE4A-201ENST00000252108 USP35Q9P2H5 1018 aa5.48□□□□□ -1.53
UBE4A-201ENST00000252108 DMRT2Q9Y5R5 561 aa5.48□□□□□ -1.53
UBE4A-201ENST00000252108 NWD1Q149M9 1564 aa5.48□□□□□ -1.53
UBE4A-201ENST00000252108 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.48□□□□□ -1.53
UBE4A-201ENST00000252108 NKTRP30414 1462 aaKnown RBP5.48□□□□□ -1.53
UBE4A-201ENST00000252108 TSPOAP1O95153 1857 aa5.47□□□□□ -1.53
UBE4A-201ENST00000252108 CFAP70Q5T0N1 1121 aa5.47□□□□□ -1.53
UBE4A-201ENST00000252108 FAM9BQ8IZU0 186 aa5.47□□□□□ -1.53
UBE4A-201ENST00000252108 TMC1Q8TDI8 760 aa5.47□□□□□ -1.53
UBE4A-201ENST00000252108 PIK3C2AO00443 1686 aa5.47□□□□□ -1.53
UBE4A-201ENST00000252108 ADAMTS13Q76LX8 1427 aa5.47□□□□□ -1.53
UBE4A-201ENST00000252108 TMF1P82094 1093 aa5.47□□□□□ -1.53
UBE4A-201ENST00000252108 CDCA7LQ96GN5 454 aa5.47□□□□□ -1.53
UBE4A-201ENST00000252108 SLFN5Q08AF3 891 aa5.47□□□□□ -1.53
UBE4A-201ENST00000252108 TCERG1O14776 1098 aaKnown RBP5.46□□□□□ -1.53
UBE4A-201ENST00000252108 ADAMTS8Q9UP79 889 aa5.46□□□□□ -1.53
UBE4A-201ENST00000252108 LMO7Q8WWI1 1683 aa5.46□□□□□ -1.53
UBE4A-201ENST00000252108 MED1Q15648 1581 aaPredicted RBP5.46□□□□□ -1.53
UBE4A-201ENST00000252108 FAM135BQ49AJ0 1406 aa5.46□□□□□ -1.53
UBE4A-201ENST00000252108 PLEKHF1Q96S99 279 aa5.46□□□□□ -1.54
UBE4A-201ENST00000252108 RGPD8O14715 1765 aaPredicted RBP5.46□□□□□ -1.54
UBE4A-201ENST00000252108 CCDC27Q2M243 656 aa5.46□□□□□ -1.54
UBE4A-201ENST00000252108 SIPA1L3O60292 1781 aaPredicted RBP5.46□□□□□ -1.54
UBE4A-201ENST00000252108 NSD3Q9BZ95 1437 aa5.46□□□□□ -1.54
UBE4A-201ENST00000252108 OSCARQ8IYS5 282 aa5.45□□□□□ -1.54
UBE4A-201ENST00000252108 CHD2O14647 1828 aaKnown RBP5.45□□□□□ -1.54
UBE4A-201ENST00000252108 A0A1W2PP64 1363 aa5.45□□□□□ -1.54
UBE4A-201ENST00000252108 KDM2AQ9Y2K7 1162 aa5.45□□□□□ -1.54
UBE4A-201ENST00000252108 FAM208AQ9UK61 1670 aaKnown RBP5.45□□□□□ -1.54
UBE4A-201ENST00000252108 POLR3GLQ9BT43 218 aa5.45□□□□□ -1.54
UBE4A-201ENST00000252108 USP19O94966 1318 aa5.45□□□□□ -1.54
UBE4A-201ENST00000252108 KIF3BO15066 747 aa5.45□□□□□ -1.54
UBE4A-201ENST00000252108 LMTK3Q96Q04 1460 aa5.44□□□□□ -1.54
UBE4A-201ENST00000252108 CDK12Q9NYV4 1490 aaPredicted RBP5.44□□□□□ -1.54
UBE4A-201ENST00000252108 DEKP35659 375 aaKnown RBP5.44□□□□□ -1.54
UBE4A-201ENST00000252108 IPO9Q96P70 1041 aaKnown RBP5.44□□□□□ -1.54
UBE4A-201ENST00000252108 PIK3R4Q99570 1358 aa5.44□□□□□ -1.54
UBE4A-201ENST00000252108 NPM1P06748 294 aaKnown RBP eCLIP5.44□□□□□ -1.54
UBE4A-201ENST00000252108 MS4A1P11836 297 aa5.44□□□□□ -1.54
UBE4A-201ENST00000252108 PPP6R1Q9UPN7 881 aa5.44□□□□□ -1.54
UBE4A-201ENST00000252108 FER1L4A9Z1Z3 1794 aa5.44□□□□□ -1.54
UBE4A-201ENST00000252108 ADAMTSL3P82987 1691 aa5.44□□□□□ -1.54
UBE4A-201ENST00000252108 SENP3Q9H4L4 574 aaPredicted RBP5.44□□□□□ -1.54
UBE4A-201ENST00000252108 TRPM3Q9HCF6 1732 aaPredicted RBP5.43□□□□□ -1.54
UBE4A-201ENST00000252108 C20orf194Q5TEA3 1177 aa5.43□□□□□ -1.54
UBE4A-201ENST00000252108 NGEFQ8N5V2 710 aa5.43□□□□□ -1.54
UBE4A-201ENST00000252108 OVOS2A0A0J9YW53 1432 aa5.43□□□□□ -1.54
UBE4A-201ENST00000252108 OVOS2Q6IE36 1432 aa5.43□□□□□ -1.54
UBE4A-201ENST00000252108 CENPJQ9HC77 1338 aaPredicted RBP5.43□□□□□ -1.54
UBE4A-201ENST00000252108 RGL3Q3MIN7 710 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 SIRT1Q96EB6 747 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 NCAPD2Q15021 1401 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 GLI3P10071 1580 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 B4GALNT3Q6L9W6 998 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 PTPRUQ92729 1446 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 IRX6P78412 446 aaPredicted RBP5.42□□□□□ -1.54
UBE4A-201ENST00000252108 IDI1Q13907 227 aa5.42□□□□□ -1.54
UBE4A-201ENST00000252108 RCAN3Q9UKA8 241 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms