RNA–Protein interactions for RNA: ENST00000247668.6

TRAF2-201, Transcript of TNF receptor associated factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF2, Length 2,264 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF2-201ENST00000247668 CDK19Q9BWU1 502 aa23.37■■□□□ 1.33
TRAF2-201ENST00000247668 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
TRAF2-201ENST00000247668 NCKAP5LQ9HCH0 1330 aa23.36■■□□□ 1.33
TRAF2-201ENST00000247668 SLC24A1O60721 1099 aa23.35■■□□□ 1.33
TRAF2-201ENST00000247668 NLRP13Q86W25 1043 aa23.35■■□□□ 1.33
TRAF2-201ENST00000247668 THEMISQ8N1K5 641 aaPredicted RBP23.34■■□□□ 1.33
TRAF2-201ENST00000247668 ABCC11Q96J66 1382 aa23.34■■□□□ 1.33
TRAF2-201ENST00000247668 EID1Q9Y6B2 187 aa23.34■■□□□ 1.33
TRAF2-201ENST00000247668 TNNT2P45379 298 aaPredicted RBP23.33■■□□□ 1.33
TRAF2-201ENST00000247668 NSD3Q9BZ95 1437 aa23.33■■□□□ 1.32
TRAF2-201ENST00000247668 PPP2R1AP30153 589 aa23.33■■□□□ 1.32
TRAF2-201ENST00000247668 ROBO2Q9HCK4 1378 aa23.32■■□□□ 1.32
TRAF2-201ENST00000247668 ADAMTSL3P82987 1691 aa23.32■■□□□ 1.32
TRAF2-201ENST00000247668 BRD4O60885 1362 aaPredicted RBP23.32■■□□□ 1.32
TRAF2-201ENST00000247668 PLEKHG1Q9ULL1 1385 aa23.31■■□□□ 1.32
TRAF2-201ENST00000247668 PTPRUQ92729 1446 aa23.31■■□□□ 1.32
TRAF2-201ENST00000247668 CABP1Q9NZU7 370 aa23.3■■□□□ 1.32
TRAF2-201ENST00000247668 ARHGAP23Q9P227 1491 aa23.3■■□□□ 1.32
TRAF2-201ENST00000247668 NUTM2FA1L443 756 aa23.29■■□□□ 1.32
TRAF2-201ENST00000247668 SLIT1O75093 1534 aa23.28■■□□□ 1.32
TRAF2-201ENST00000247668 SALL2Q9Y467 1007 aaPredicted RBP23.28■■□□□ 1.32
TRAF2-201ENST00000247668 A0A1W2PP64 1363 aa23.27■■□□□ 1.32
TRAF2-201ENST00000247668 CEP170BQ9Y4F5 1589 aaPredicted RBP23.26■■□□□ 1.31
TRAF2-201ENST00000247668 MED14O60244 1454 aa23.25■■□□□ 1.31
TRAF2-201ENST00000247668 RBM33Q96EV2 1170 aaKnown RBP23.25■■□□□ 1.31
TRAF2-201ENST00000247668 AMOTL2Q9Y2J4 779 aa23.25■■□□□ 1.31
TRAF2-201ENST00000247668 DLC1Q96QB1 1528 aa23.24■■□□□ 1.31
TRAF2-201ENST00000247668 CD163L1Q9NR16 1453 aa23.23■■□□□ 1.31
TRAF2-201ENST00000247668 WASLO00401 505 aaPredicted RBP23.22■■□□□ 1.31
TRAF2-201ENST00000247668 ANKRD36BQ8N2N9 1353 aa23.22■■□□□ 1.31
TRAF2-201ENST00000247668 PUS7Q96PZ0 661 aaKnown RBP23.21■■□□□ 1.31
TRAF2-201ENST00000247668 GGNBP2Q9H3C7 697 aa23.21■■□□□ 1.31
TRAF2-201ENST00000247668 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
TRAF2-201ENST00000247668 TECPR2O15040 1411 aa23.2■■□□□ 1.3
TRAF2-201ENST00000247668 TBX22Q9Y458 520 aa23.2■■□□□ 1.3
TRAF2-201ENST00000247668 NPC1L1Q9UHC9 1359 aa23.19■■□□□ 1.3
TRAF2-201ENST00000247668 PELP1Q8IZL8 1130 aaKnown RBP23.19■■□□□ 1.3
TRAF2-201ENST00000247668 FBLN1P23142 703 aa23.19■■□□□ 1.3
TRAF2-201ENST00000247668 MORC1Q86VD1 984 aa23.19■■□□□ 1.3
TRAF2-201ENST00000247668 PRR36Q9H6K5 1346 aa23.18■■□□□ 1.3
TRAF2-201ENST00000247668 KCNA6P17658 529 aa23.18■■□□□ 1.3
TRAF2-201ENST00000247668 ATAD2Q6PL18 1390 aa23.18■■□□□ 1.3
TRAF2-201ENST00000247668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.17■■□□□ 1.3
TRAF2-201ENST00000247668 NUDT16Q96DE0 195 aaKnown RBP23.17■■□□□ 1.3
TRAF2-201ENST00000247668 ZBED9Q6R2W3 1325 aa23.17■■□□□ 1.3
TRAF2-201ENST00000247668 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.16■■□□□ 1.3
TRAF2-201ENST00000247668 CGNL1Q0VF96 1302 aa23.16■■□□□ 1.3
TRAF2-201ENST00000247668 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
TRAF2-201ENST00000247668 ANKLE2Q86XL3 938 aa23.15■■□□□ 1.3
TRAF2-201ENST00000247668 CPS1P31327 1500 aa23.15■■□□□ 1.3
TRAF2-201ENST00000247668 FYB1O15117 783 aa23.15■■□□□ 1.3
TRAF2-201ENST00000247668 SIRT1Q96EB6 747 aa23.13■■□□□ 1.29
TRAF2-201ENST00000247668 TERF2IPQ9NYB0 399 aa23.12■■□□□ 1.29
TRAF2-201ENST00000247668 ZRANB1Q9UGI0 708 aa23.12■■□□□ 1.29
TRAF2-201ENST00000247668 PPIP5K1Q6PFW1 1433 aa23.11■■□□□ 1.29
TRAF2-201ENST00000247668 KNDC1Q76NI1 1749 aa23.11■■□□□ 1.29
TRAF2-201ENST00000247668 SETD1BQ9UPS6 1966 aaKnown RBP23.1■■□□□ 1.29
TRAF2-201ENST00000247668 MTHFSP49914 203 aa23.1■■□□□ 1.29
TRAF2-201ENST00000247668 CCDC146Q8IYE0 955 aa23.1■■□□□ 1.29
TRAF2-201ENST00000247668 SUPT16HQ9Y5B9 1047 aaKnown RBP23.1■■□□□ 1.29
TRAF2-201ENST00000247668 CCDC61Q9Y6R9 512 aa23.08■■□□□ 1.29
TRAF2-201ENST00000247668 HDGFL2Q7Z4V5 671 aaPredicted RBP23.08■■□□□ 1.29
TRAF2-201ENST00000247668 HSPA2P54652 639 aa23.07■■□□□ 1.28
TRAF2-201ENST00000247668 NINLQ9Y2I6 1382 aa23.06■■□□□ 1.28
TRAF2-201ENST00000247668 IRX6P78412 446 aaPredicted RBP23.06■■□□□ 1.28
TRAF2-201ENST00000247668 ATP7BP35670 1465 aa23.05■■□□□ 1.28
TRAF2-201ENST00000247668 KDM4FA0A1W2PPD8 638 aa23.05■■□□□ 1.28
TRAF2-201ENST00000247668 NME9Q86XW9 330 aa23.05■■□□□ 1.28
TRAF2-201ENST00000247668 PMFBP1Q8TBY8 1022 aa23.05■■□□□ 1.28
TRAF2-201ENST00000247668 WDR43Q15061 677 aaKnown RBP eCLIP23.05■■□□□ 1.28
TRAF2-201ENST00000247668 ZNF142P52746 1687 aaPredicted RBP23.05■■□□□ 1.28
TRAF2-201ENST00000247668 CDCA7LQ96GN5 454 aa23.04■■□□□ 1.28
TRAF2-201ENST00000247668 FKBP8Q14318 412 aa23.02■■□□□ 1.28
TRAF2-201ENST00000247668 CPSF1Q10570 1443 aaKnown RBP23.02■■□□□ 1.28
TRAF2-201ENST00000247668 USP32Q8NFA0 1604 aa23.01■■□□□ 1.27
TRAF2-201ENST00000247668 BLMP54132 1417 aaPredicted RBP23■■□□□ 1.27
TRAF2-201ENST00000247668 ACEP12821 1306 aa23■■□□□ 1.27
TRAF2-201ENST00000247668 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
TRAF2-201ENST00000247668 NKTRP30414 1462 aaKnown RBP22.99■■□□□ 1.27
TRAF2-201ENST00000247668 XRN1Q8IZH2 1706 aaKnown RBP22.98■■□□□ 1.27
TRAF2-201ENST00000247668 NPHP4O75161 1426 aaPredicted RBP22.98■■□□□ 1.27
TRAF2-201ENST00000247668 POLR3AO14802 1390 aaPredicted RBP22.96■■□□□ 1.27
TRAF2-201ENST00000247668 PPM1GO15355 546 aaPredicted RBP22.96■■□□□ 1.27
TRAF2-201ENST00000247668 DIP2AQ14689 1571 aa22.96■■□□□ 1.27
TRAF2-201ENST00000247668 APAF1O14727 1248 aa22.95■■□□□ 1.26
TRAF2-201ENST00000247668 NSD2O96028 1365 aa22.95■■□□□ 1.26
TRAF2-201ENST00000247668 RGPD8O14715 1765 aaPredicted RBP22.94■■□□□ 1.26
TRAF2-201ENST00000247668 ADGRB2O60241 1585 aa22.93■■□□□ 1.26
TRAF2-201ENST00000247668 CDC42BPGQ6DT37 1551 aa22.92■■□□□ 1.26
TRAF2-201ENST00000247668 NUDCQ9Y266 331 aa22.92■■□□□ 1.26
TRAF2-201ENST00000247668 EMILIN1Q9Y6C2 1016 aa22.92■■□□□ 1.26
TRAF2-201ENST00000247668 PLEKHG3A1L390 1219 aa22.91■■□□□ 1.26
TRAF2-201ENST00000247668 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
TRAF2-201ENST00000247668 PIK3R4Q99570 1358 aa22.91■■□□□ 1.26
TRAF2-201ENST00000247668 EDC4Q6P2E9 1401 aaKnown RBP22.91■■□□□ 1.26
TRAF2-201ENST00000247668 SOX12O15370 315 aa22.91■■□□□ 1.26
TRAF2-201ENST00000247668 RRS1Q15050 365 aaKnown RBP22.91■■□□□ 1.26
TRAF2-201ENST00000247668 POLKQ9UBT6 870 aa22.91■■□□□ 1.26
TRAF2-201ENST00000247668 RRP7AQ9Y3A4 280 aaKnown RBP22.91■■□□□ 1.26
TRAF2-201ENST00000247668 SHPRHQ149N8 1683 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms