RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 CARD14Q9BXL6 1004 aa15.73■□□□□ 0.11
NR1D1-201ENST00000246672 PODXL2Q9NZ53 605 aa15.73■□□□□ 0.11
NR1D1-201ENST00000246672 ZMYM3Q14202 1370 aa15.73■□□□□ 0.11
NR1D1-201ENST00000246672 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
NR1D1-201ENST00000246672 MAST1Q9Y2H9 1570 aa15.71■□□□□ 0.11
NR1D1-201ENST00000246672 HSCBQ8IWL3 235 aa15.71■□□□□ 0.11
NR1D1-201ENST00000246672 TNPO1Q92973 898 aaKnown RBP15.7■□□□□ 0.1
NR1D1-201ENST00000246672 ARHGAP5Q13017 1502 aa15.7■□□□□ 0.1
NR1D1-201ENST00000246672 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
NR1D1-201ENST00000246672 CALD1Q05682 793 aaKnown RBP15.7■□□□□ 0.1
NR1D1-201ENST00000246672 DDIT3P35638 169 aa15.7■□□□□ 0.1
NR1D1-201ENST00000246672 AAMPQ13685 434 aa15.7■□□□□ 0.1
NR1D1-201ENST00000246672 PRDM4Q9UKN5 801 aa15.7■□□□□ 0.1
NR1D1-201ENST00000246672 SCAPERQ9BY12 1400 aa15.69■□□□□ 0.1
NR1D1-201ENST00000246672 KDM5AP29375 1690 aaKnown RBP15.69■□□□□ 0.1
NR1D1-201ENST00000246672 RIPK4P57078 832 aa15.68■□□□□ 0.1
NR1D1-201ENST00000246672 TNNT2P45379 298 aaPredicted RBP15.68■□□□□ 0.1
NR1D1-201ENST00000246672 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
NR1D1-201ENST00000246672 CEP152O94986 1710 aa15.67■□□□□ 0.1
NR1D1-201ENST00000246672 DUOX2Q9NRD8 1548 aa15.67■□□□□ 0.1
NR1D1-201ENST00000246672 OFD1O75665 1012 aa15.67■□□□□ 0.1
NR1D1-201ENST00000246672 PLEKHG5O94827 1062 aa15.67■□□□□ 0.1
NR1D1-201ENST00000246672 ZSCAN30Q86W11 494 aa15.67■□□□□ 0.1
NR1D1-201ENST00000246672 POLR3AO14802 1390 aaPredicted RBP15.67■□□□□ 0.1
NR1D1-201ENST00000246672 SPHKAPQ2M3C7 1700 aa15.66■□□□□ 0.1
NR1D1-201ENST00000246672 RUNDC1Q96C34 613 aa15.66■□□□□ 0.1
NR1D1-201ENST00000246672 TTC37Q6PGP7 1564 aa15.66■□□□□ 0.1
NR1D1-201ENST00000246672 NCOA3Q9Y6Q9 1424 aa15.65■□□□□ 0.1
NR1D1-201ENST00000246672 CCDC173Q0VFZ6 552 aa15.65■□□□□ 0.1
NR1D1-201ENST00000246672 MVPQ14764 893 aaKnown RBP15.65■□□□□ 0.1
NR1D1-201ENST00000246672 PPP1R9BQ96SB3 815 aa15.65■□□□□ 0.1
NR1D1-201ENST00000246672 GBP4Q96PP9 640 aa15.64■□□□□ 0.09
NR1D1-201ENST00000246672 ERVK-7P63135 1459 aa15.64■□□□□ 0.09
NR1D1-201ENST00000246672 NASPP49321 788 aaPredicted RBP15.64■□□□□ 0.09
NR1D1-201ENST00000246672 SKOR2Q2VWA4 1001 aaPredicted RBP15.64■□□□□ 0.09
NR1D1-201ENST00000246672 WDR63Q8IWG1 891 aa15.63■□□□□ 0.09
NR1D1-201ENST00000246672 FAM13BQ9NYF5 915 aa15.63■□□□□ 0.09
NR1D1-201ENST00000246672 RAB3GAP1Q15042 981 aa15.63■□□□□ 0.09
NR1D1-201ENST00000246672 CFAP70Q5T0N1 1121 aa15.63■□□□□ 0.09
NR1D1-201ENST00000246672 SMC5Q8IY18 1101 aa15.63■□□□□ 0.09
NR1D1-201ENST00000246672 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
NR1D1-201ENST00000246672 SHPRHQ149N8 1683 aa15.62■□□□□ 0.09
NR1D1-201ENST00000246672 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
NR1D1-201ENST00000246672 MSNP26038 577 aaKnown RBP15.62■□□□□ 0.09
NR1D1-201ENST00000246672 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.62■□□□□ 0.09
NR1D1-201ENST00000246672 MORC1Q86VD1 984 aa15.62■□□□□ 0.09
NR1D1-201ENST00000246672 FTSJ3Q8IY81 847 aaKnown RBP15.62■□□□□ 0.09
NR1D1-201ENST00000246672 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
NR1D1-201ENST00000246672 IQSEC2Q5JU85 1478 aa15.61■□□□□ 0.09
NR1D1-201ENST00000246672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.61■□□□□ 0.09
NR1D1-201ENST00000246672 SNX21Q969T3 373 aa15.61■□□□□ 0.09
NR1D1-201ENST00000246672 CIZ1Q9ULV3 898 aaPredicted RBP15.61■□□□□ 0.09
NR1D1-201ENST00000246672 R3HCC1Q9Y3T6 440 aaKnown RBP15.61■□□□□ 0.09
NR1D1-201ENST00000246672 HSP90AB1P08238 724 aaKnown RBP15.6■□□□□ 0.09
NR1D1-201ENST00000246672 ZKSCAN2Q63HK3 967 aa15.6■□□□□ 0.09
NR1D1-201ENST00000246672 DZIP1LQ8IYY4 767 aaKnown RBP15.6■□□□□ 0.09
NR1D1-201ENST00000246672 CLTCL1P53675 1640 aa15.6■□□□□ 0.09
NR1D1-201ENST00000246672 TRPM2O94759 1503 aa15.6■□□□□ 0.09
NR1D1-201ENST00000246672 TERF1P54274 439 aa15.59■□□□□ 0.09
NR1D1-201ENST00000246672 STAC3Q96MF2 364 aa15.59■□□□□ 0.09
NR1D1-201ENST00000246672 RBM25P49756 843 aaKnown RBP15.58■□□□□ 0.09
NR1D1-201ENST00000246672 ANP32BQ92688 251 aaKnown RBP15.58■□□□□ 0.09
NR1D1-201ENST00000246672 NSD3Q9BZ95 1437 aa15.57■□□□□ 0.08
NR1D1-201ENST00000246672 TSR2Q969E8 191 aaKnown RBP15.57■□□□□ 0.08
NR1D1-201ENST00000246672 CD2BP2O95400 341 aaKnown RBP15.56■□□□□ 0.08
NR1D1-201ENST00000246672 MTHFSP49914 203 aa15.56■□□□□ 0.08
NR1D1-201ENST00000246672 HDAC1Q13547 482 aaPredicted RBP15.56■□□□□ 0.08
NR1D1-201ENST00000246672 MAP7D2Q96T17 732 aa15.56■□□□□ 0.08
NR1D1-201ENST00000246672 ARID3AQ99856 593 aa15.56■□□□□ 0.08
NR1D1-201ENST00000246672 ADGRF5Q8IZF2 1346 aa15.56■□□□□ 0.08
NR1D1-201ENST00000246672 PTMSP20962 102 aa15.56■□□□□ 0.08
NR1D1-201ENST00000246672 SSFA2P28290 1259 aa15.56■□□□□ 0.08
NR1D1-201ENST00000246672 CCDC27Q2M243 656 aa15.56■□□□□ 0.08
NR1D1-201ENST00000246672 ITPRIPQ8IWB1 547 aa15.56■□□□□ 0.08
NR1D1-201ENST00000246672 SMC4Q9NTJ3 1288 aa15.55■□□□□ 0.08
NR1D1-201ENST00000246672 PTPRTO14522 1441 aa15.55■□□□□ 0.08
NR1D1-201ENST00000246672 TRIM27P14373 513 aa15.55■□□□□ 0.08
NR1D1-201ENST00000246672 SLC12A5Q9H2X9 1139 aa15.55■□□□□ 0.08
NR1D1-201ENST00000246672 DDX49Q9Y6V7 483 aaKnown RBP15.55■□□□□ 0.08
NR1D1-201ENST00000246672 KANK1Q14678 1352 aa15.55■□□□□ 0.08
NR1D1-201ENST00000246672 SLC24A1O60721 1099 aa15.54■□□□□ 0.08
NR1D1-201ENST00000246672 XPCQ01831 940 aaPredicted RBP15.54■□□□□ 0.08
NR1D1-201ENST00000246672 KIAA1210Q9ULL0 1709 aa15.54■□□□□ 0.08
NR1D1-201ENST00000246672 UQCRHLA0A096LP55 91 aa15.53■□□□□ 0.08
NR1D1-201ENST00000246672 UQCRHP07919 91 aa15.53■□□□□ 0.08
NR1D1-201ENST00000246672 KIF2CQ99661 725 aa15.53■□□□□ 0.08
NR1D1-201ENST00000246672 A0A0U1RQG5 324 aaPredicted RBP15.53■□□□□ 0.08
NR1D1-201ENST00000246672 KLHL40Q2TBA0 621 aa15.53■□□□□ 0.08
NR1D1-201ENST00000246672 EXOSC9Q06265 439 aaKnown RBP15.53■□□□□ 0.08
NR1D1-201ENST00000246672 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.53■□□□□ 0.08
NR1D1-201ENST00000246672 TRAPPC8Q9Y2L5 1435 aa15.52■□□□□ 0.08
NR1D1-201ENST00000246672 U2AF1L5P0DN76 240 aaPredicted RBP15.52■□□□□ 0.08
NR1D1-201ENST00000246672 U2AF1Q01081 240 aaKnown RBP eCLIP15.52■□□□□ 0.08
NR1D1-201ENST00000246672 DDX19BQ9UMR2 479 aa15.52■□□□□ 0.08
NR1D1-201ENST00000246672 NOL7Q9UMY1 257 aaKnown RBP15.52■□□□□ 0.08
NR1D1-201ENST00000246672 ABCA6Q8N139 1617 aa15.52■□□□□ 0.07
NR1D1-201ENST00000246672 GOLGA6L22H0YM25 854 aa15.52■□□□□ 0.07
NR1D1-201ENST00000246672 SSH1Q8WYL5 1049 aa15.52■□□□□ 0.07
NR1D1-201ENST00000246672 ZNF500O60304 480 aaPredicted RBP15.51■□□□□ 0.07
NR1D1-201ENST00000246672 CFAP53Q96M91 514 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms