RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 GOLGA6L4A6NEF3 574 aa11.44□□□□□ -0.58
COL21A1-201ENST00000244728 CFAP44Q96MT7 982 aa11.44□□□□□ -0.58
COL21A1-201ENST00000244728 PRKAR2BP31323 418 aa11.44□□□□□ -0.58
COL21A1-201ENST00000244728 IGHDP01880 384 aa11.44□□□□□ -0.58
COL21A1-201ENST00000244728 IQGAP2Q13576 1575 aa11.43□□□□□ -0.58
COL21A1-201ENST00000244728 LRPPRCP42704 1394 aaKnown RBP11.43□□□□□ -0.58
COL21A1-201ENST00000244728 PLEKHH2Q8IVE3 1493 aa11.43□□□□□ -0.58
COL21A1-201ENST00000244728 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
COL21A1-201ENST00000244728 FKBP5Q13451 457 aaPredicted RBP11.42□□□□□ -0.58
COL21A1-201ENST00000244728 GORABQ5T7V8 394 aa11.42□□□□□ -0.58
COL21A1-201ENST00000244728 PARD3Q8TEW0 1356 aa11.42□□□□□ -0.58
COL21A1-201ENST00000244728 DISP3Q9P2K9 1392 aa11.42□□□□□ -0.58
COL21A1-201ENST00000244728 TBC1D2Q9BYX2 928 aa11.42□□□□□ -0.58
COL21A1-201ENST00000244728 TCOF1Q13428 1488 aaKnown RBP11.42□□□□□ -0.58
COL21A1-201ENST00000244728 CDK19Q9BWU1 502 aa11.42□□□□□ -0.58
COL21A1-201ENST00000244728 GRPEL1Q9HAV7 217 aa11.42□□□□□ -0.58
COL21A1-201ENST00000244728 TEX14Q8IWB6 1497 aa11.42□□□□□ -0.58
COL21A1-201ENST00000244728 FAM13BQ9NYF5 915 aa11.41□□□□□ -0.58
COL21A1-201ENST00000244728 WWC1Q8IX03 1113 aa11.41□□□□□ -0.58
COL21A1-201ENST00000244728 RALGAPBQ86X10 1494 aa11.41□□□□□ -0.58
COL21A1-201ENST00000244728 KIAA2012Q0VF49 1180 aa11.41□□□□□ -0.58
COL21A1-201ENST00000244728 NASPP49321 788 aaPredicted RBP11.41□□□□□ -0.58
COL21A1-201ENST00000244728 C1orf141Q5JVX7 400 aa11.41□□□□□ -0.58
COL21A1-201ENST00000244728 WAPLQ7Z5K2 1190 aa11.41□□□□□ -0.58
COL21A1-201ENST00000244728 ESPNB1AK53 854 aa11.4□□□□□ -0.58
COL21A1-201ENST00000244728 MAGI1Q96QZ7 1491 aaPredicted RBP11.4□□□□□ -0.58
COL21A1-201ENST00000244728 SPATA31E1Q6ZUB1 1445 aa11.4□□□□□ -0.58
COL21A1-201ENST00000244728 ST18O60284 1047 aa11.4□□□□□ -0.58
COL21A1-201ENST00000244728 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
COL21A1-201ENST00000244728 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL21A1-201ENST00000244728 UBE2Q2Q8WVN8 375 aa11.4□□□□□ -0.58
COL21A1-201ENST00000244728 PKNOX2Q96KN3 472 aa11.4□□□□□ -0.58
COL21A1-201ENST00000244728 TSPYL4Q9UJ04 414 aa11.4□□□□□ -0.58
COL21A1-201ENST00000244728 FBXO31Q5XUX0 539 aaPredicted RBP11.4□□□□□ -0.58
COL21A1-201ENST00000244728 NKTRP30414 1462 aaKnown RBP11.4□□□□□ -0.59
COL21A1-201ENST00000244728 AMER1Q5JTC6 1135 aaPredicted RBP11.39□□□□□ -0.59
COL21A1-201ENST00000244728 GRIN2AQ12879 1464 aa11.39□□□□□ -0.59
COL21A1-201ENST00000244728 ADGRF5Q8IZF2 1346 aa11.39□□□□□ -0.59
COL21A1-201ENST00000244728 NINLQ9Y2I6 1382 aa11.39□□□□□ -0.59
COL21A1-201ENST00000244728 RRS1Q15050 365 aaKnown RBP11.39□□□□□ -0.59
COL21A1-201ENST00000244728 MCTP1Q6DN14 999 aa11.39□□□□□ -0.59
COL21A1-201ENST00000244728 RBM33Q96EV2 1170 aaKnown RBP11.39□□□□□ -0.59
COL21A1-201ENST00000244728 C1orf115Q9H7X2 142 aa11.39□□□□□ -0.59
COL21A1-201ENST00000244728 CTTNBP2Q8WZ74 1663 aa11.39□□□□□ -0.59
COL21A1-201ENST00000244728 CHAF1AQ13111 956 aaPredicted RBP11.39□□□□□ -0.59
COL21A1-201ENST00000244728 ABTB2Q8N961 1025 aa11.39□□□□□ -0.59
COL21A1-201ENST00000244728 MVPQ14764 893 aaKnown RBP11.38□□□□□ -0.59
COL21A1-201ENST00000244728 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
COL21A1-201ENST00000244728 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
COL21A1-201ENST00000244728 SYAP1Q96A49 352 aaPredicted RBP11.38□□□□□ -0.59
COL21A1-201ENST00000244728 NLRP2Q9NX02 1062 aa11.38□□□□□ -0.59
COL21A1-201ENST00000244728 C9orf78Q9NZ63 289 aaPredicted RBP11.38□□□□□ -0.59
COL21A1-201ENST00000244728 GNAI1P63096 354 aa11.37□□□□□ -0.59
COL21A1-201ENST00000244728 AIMP1Q12904 312 aaKnown RBP11.37□□□□□ -0.59
COL21A1-201ENST00000244728 SYTL4Q96C24 671 aaPredicted RBP11.37□□□□□ -0.59
COL21A1-201ENST00000244728 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
COL21A1-201ENST00000244728 PER1O15534 1290 aaPredicted RBP11.37□□□□□ -0.59
COL21A1-201ENST00000244728 RARSP54136 660 aaKnown RBP11.37□□□□□ -0.59
COL21A1-201ENST00000244728 EVA1CP58658 441 aa11.37□□□□□ -0.59
COL21A1-201ENST00000244728 SLC52A1Q9NWF4 448 aa11.37□□□□□ -0.59
COL21A1-201ENST00000244728 KIF16BQ96L93 1317 aa11.37□□□□□ -0.59
COL21A1-201ENST00000244728 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.37□□□□□ -0.59
COL21A1-201ENST00000244728 PLEKHH1Q9ULM0 1364 aa11.37□□□□□ -0.59
COL21A1-201ENST00000244728 SEC24BO95487 1268 aa11.36□□□□□ -0.59
COL21A1-201ENST00000244728 IDI1Q13907 227 aa11.36□□□□□ -0.59
COL21A1-201ENST00000244728 ESCO1Q5FWF5 840 aa11.36□□□□□ -0.59
COL21A1-201ENST00000244728 ISY1Q9ULR0 285 aaKnown RBP11.36□□□□□ -0.59
COL21A1-201ENST00000244728 R3HCC1Q9Y3T6 440 aaKnown RBP11.36□□□□□ -0.59
COL21A1-201ENST00000244728 XPCQ01831 940 aaPredicted RBP11.36□□□□□ -0.59
COL21A1-201ENST00000244728 PANK2Q9BZ23 570 aa11.36□□□□□ -0.59
COL21A1-201ENST00000244728 API5Q9BZZ5 524 aaKnown RBP11.36□□□□□ -0.59
COL21A1-201ENST00000244728 TBC1D32Q96NH3 1257 aa11.35□□□□□ -0.59
COL21A1-201ENST00000244728 PZPP20742 1482 aa11.35□□□□□ -0.59
COL21A1-201ENST00000244728 KDM2BQ8NHM5 1336 aa11.35□□□□□ -0.59
COL21A1-201ENST00000244728 FBLN1P23142 703 aa11.35□□□□□ -0.59
COL21A1-201ENST00000244728 CAVIN1Q6NZI2 390 aaKnown RBP11.35□□□□□ -0.59
COL21A1-201ENST00000244728 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
COL21A1-201ENST00000244728 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
COL21A1-201ENST00000244728 XRCC6P12956 609 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL21A1-201ENST00000244728 CEBPAP49715 358 aaPredicted RBP11.35□□□□□ -0.59
COL21A1-201ENST00000244728 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
COL21A1-201ENST00000244728 NUCB2P80303 420 aa11.34□□□□□ -0.59
COL21A1-201ENST00000244728 RRP9O43818 475 aaKnown RBP11.34□□□□□ -0.59
COL21A1-201ENST00000244728 GTF2E1P29083 439 aaPredicted RBP11.34□□□□□ -0.59
COL21A1-201ENST00000244728 RBM10P98175 930 aaKnown RBP11.34□□□□□ -0.59
COL21A1-201ENST00000244728 TPM2P07951 284 aa11.34□□□□□ -0.59
COL21A1-201ENST00000244728 KDM6BO15054 1643 aa11.33□□□□□ -0.6
COL21A1-201ENST00000244728 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
COL21A1-201ENST00000244728 GPATCH8Q9UKJ3 1502 aaKnown RBP11.33□□□□□ -0.6
COL21A1-201ENST00000244728 CCDC141Q6ZP82 1450 aa11.33□□□□□ -0.6
COL21A1-201ENST00000244728 DRC7Q8IY82 874 aa11.33□□□□□ -0.6
COL21A1-201ENST00000244728 TTC5Q8N0Z6 440 aa11.33□□□□□ -0.6
COL21A1-201ENST00000244728 TESK2Q96S53 571 aa11.33□□□□□ -0.6
COL21A1-201ENST00000244728 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
COL21A1-201ENST00000244728 CCDC173Q0VFZ6 552 aa11.33□□□□□ -0.6
COL21A1-201ENST00000244728 RNF214Q8ND24 703 aa11.32□□□□□ -0.6
COL21A1-201ENST00000244728 GPATCH3Q96I76 525 aa11.32□□□□□ -0.6
COL21A1-201ENST00000244728 TWISTNBQ3B726 338 aaPredicted RBP11.32□□□□□ -0.6
COL21A1-201ENST00000244728 CDC45O75419 566 aa11.32□□□□□ -0.6
COL21A1-201ENST00000244728 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms