RNA–Protein interactions for RNA: ENST00000239223.3

DUSP1-201, Transcript of dual specificity phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP1, Length 2,019 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP1-201ENST00000239223 NCKAP5LQ9HCH0 1330 aa26.41■■□□□ 1.82
DUSP1-201ENST00000239223 PER1O15534 1290 aaPredicted RBP26.41■■□□□ 1.82
DUSP1-201ENST00000239223 AMOTL2Q9Y2J4 779 aa26.39■■□□□ 1.81
DUSP1-201ENST00000239223 FAM135BQ49AJ0 1406 aa26.39■■□□□ 1.81
DUSP1-201ENST00000239223 HSPA2P54652 639 aa26.38■■□□□ 1.81
DUSP1-201ENST00000239223 XRN1Q8IZH2 1706 aaKnown RBP26.37■■□□□ 1.81
DUSP1-201ENST00000239223 NPHP4O75161 1426 aaPredicted RBP26.37■■□□□ 1.81
DUSP1-201ENST00000239223 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.36■■□□□ 1.81
DUSP1-201ENST00000239223 SLC12A5Q9H2X9 1139 aa26.35■■□□□ 1.81
DUSP1-201ENST00000239223 SRPK2P78362 688 aaKnown RBP26.34■■□□□ 1.81
DUSP1-201ENST00000239223 TMC1Q8TDI8 760 aa26.34■■□□□ 1.81
DUSP1-201ENST00000239223 SIRT1Q96EB6 747 aa26.33■■□□□ 1.81
DUSP1-201ENST00000239223 CDK19Q9BWU1 502 aa26.33■■□□□ 1.81
DUSP1-201ENST00000239223 CHD2O14647 1828 aaKnown RBP26.33■■□□□ 1.81
DUSP1-201ENST00000239223 LMTK3Q96Q04 1460 aa26.32■■□□□ 1.8
DUSP1-201ENST00000239223 KCNA6P17658 529 aa26.31■■□□□ 1.8
DUSP1-201ENST00000239223 CCDC184Q52MB2 194 aa26.31■■□□□ 1.8
DUSP1-201ENST00000239223 YTHDC1Q96MU7 727 aaKnown RBP26.31■■□□□ 1.8
DUSP1-201ENST00000239223 CARD14Q9BXL6 1004 aa26.3■■□□□ 1.8
DUSP1-201ENST00000239223 PTCH1Q13635 1447 aa26.3■■□□□ 1.8
DUSP1-201ENST00000239223 CCER2I3L3R5 266 aa26.29■■□□□ 1.8
DUSP1-201ENST00000239223 CC2D1BQ5T0F9 858 aaKnown RBP26.28■■□□□ 1.8
DUSP1-201ENST00000239223 PIK3R4Q99570 1358 aa26.28■■□□□ 1.8
DUSP1-201ENST00000239223 PUS7Q96PZ0 661 aaKnown RBP26.27■■□□□ 1.8
DUSP1-201ENST00000239223 WASLO00401 505 aaPredicted RBP26.26■■□□□ 1.79
DUSP1-201ENST00000239223 ADGRB2O60241 1585 aa26.24■■□□□ 1.79
DUSP1-201ENST00000239223 AMER1Q5JTC6 1135 aaPredicted RBP26.24■■□□□ 1.79
DUSP1-201ENST00000239223 KNSTRNQ9Y448 316 aa26.24■■□□□ 1.79
DUSP1-201ENST00000239223 ATAD2Q6PL18 1390 aa26.23■■□□□ 1.79
DUSP1-201ENST00000239223 KTN1Q86UP2 1357 aaKnown RBP26.23■■□□□ 1.79
DUSP1-201ENST00000239223 RBM33Q96EV2 1170 aaKnown RBP26.22■■□□□ 1.79
DUSP1-201ENST00000239223 PARD3Q8TEW0 1356 aa26.21■■□□□ 1.79
DUSP1-201ENST00000239223 CD163L1Q9NR16 1453 aa26.21■■□□□ 1.79
DUSP1-201ENST00000239223 NSD3Q9BZ95 1437 aa26.21■■□□□ 1.79
DUSP1-201ENST00000239223 STRCQ7RTU9 1775 aa26.2■■□□□ 1.78
DUSP1-201ENST00000239223 A0A1W2PP64 1363 aa26.2■■□□□ 1.78
DUSP1-201ENST00000239223 PRR36Q9H6K5 1346 aa26.19■■□□□ 1.78
DUSP1-201ENST00000239223 CABP1Q9NZU7 370 aa26.19■■□□□ 1.78
DUSP1-201ENST00000239223 ANKRD36BQ8N2N9 1353 aa26.19■■□□□ 1.78
DUSP1-201ENST00000239223 NUTM2FA1L443 756 aa26.18■■□□□ 1.78
DUSP1-201ENST00000239223 ATP7BP35670 1465 aa26.18■■□□□ 1.78
DUSP1-201ENST00000239223 NALCNQ8IZF0 1738 aa26.16■■□□□ 1.78
DUSP1-201ENST00000239223 RALBP1Q15311 655 aa26.15■■□□□ 1.78
DUSP1-201ENST00000239223 NUDT16Q96DE0 195 aaKnown RBP26.15■■□□□ 1.78
DUSP1-201ENST00000239223 NWD1Q149M9 1564 aa26.15■■□□□ 1.78
DUSP1-201ENST00000239223 NINLQ9Y2I6 1382 aa26.15■■□□□ 1.78
DUSP1-201ENST00000239223 MRS2Q9HD23 443 aa26.14■■□□□ 1.78
DUSP1-201ENST00000239223 PPIP5K1Q6PFW1 1433 aa26.14■■□□□ 1.78
DUSP1-201ENST00000239223 USP32Q8NFA0 1604 aa26.14■■□□□ 1.77
DUSP1-201ENST00000239223 STRCP1A6NGW2 1772 aa26.14■■□□□ 1.77
DUSP1-201ENST00000239223 MYBBP1AQ9BQG0 1328 aaKnown RBP26.13■■□□□ 1.77
DUSP1-201ENST00000239223 RGPD8O14715 1765 aaPredicted RBP26.12■■□□□ 1.77
DUSP1-201ENST00000239223 TOPAZ1Q8N9V7 1692 aa26.11■■□□□ 1.77
DUSP1-201ENST00000239223 NPC1L1Q9UHC9 1359 aa26.1■■□□□ 1.77
DUSP1-201ENST00000239223 CCDC61Q9Y6R9 512 aa26.09■■□□□ 1.77
DUSP1-201ENST00000239223 TERF2IPQ9NYB0 399 aa26.07■■□□□ 1.76
DUSP1-201ENST00000239223 NKTRP30414 1462 aaKnown RBP26.06■■□□□ 1.76
DUSP1-201ENST00000239223 FMN2Q9NZ56 1722 aa26.06■■□□□ 1.76
DUSP1-201ENST00000239223 CDC42BPGQ6DT37 1551 aa26.06■■□□□ 1.76
DUSP1-201ENST00000239223 CPSF1Q10570 1443 aaKnown RBP26.04■■□□□ 1.76
DUSP1-201ENST00000239223 HDGFL2Q7Z4V5 671 aaPredicted RBP26.04■■□□□ 1.76
DUSP1-201ENST00000239223 AKAP12Q02952 1782 aa26.04■■□□□ 1.76
DUSP1-201ENST00000239223 CGNL1Q0VF96 1302 aa26.03■■□□□ 1.76
DUSP1-201ENST00000239223 ITSN1Q15811 1721 aa26.03■■□□□ 1.76
DUSP1-201ENST00000239223 ADGRL3Q9HAR2 1447 aa26.03■■□□□ 1.76
DUSP1-201ENST00000239223 CENPBP07199 599 aaPredicted RBP26.03■■□□□ 1.76
DUSP1-201ENST00000239223 NLRP13Q86W25 1043 aa26.03■■□□□ 1.76
DUSP1-201ENST00000239223 PPP2R1AP30153 589 aa26.02■■□□□ 1.76
DUSP1-201ENST00000239223 FAM9BQ8IZU0 186 aa26.02■■□□□ 1.76
DUSP1-201ENST00000239223 MON2Q7Z3U7 1717 aa26.02■■□□□ 1.76
DUSP1-201ENST00000239223 BRD4O60885 1362 aaPredicted RBP26.02■■□□□ 1.76
DUSP1-201ENST00000239223 PROSER2Q86WR7 435 aaPredicted RBP26■■□□□ 1.75
DUSP1-201ENST00000239223 KIF20BQ96Q89 1820 aa25.99■■□□□ 1.75
DUSP1-201ENST00000239223 TNNT2P45379 298 aaPredicted RBP25.98■■□□□ 1.75
DUSP1-201ENST00000239223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.98■■□□□ 1.75
DUSP1-201ENST00000239223 GGNBP2Q9H3C7 697 aa25.98■■□□□ 1.75
DUSP1-201ENST00000239223 C14orf37Q86TY3 774 aa25.98■■□□□ 1.75
DUSP1-201ENST00000239223 PMFBP1Q8TBY8 1022 aa25.98■■□□□ 1.75
DUSP1-201ENST00000239223 ACEP12821 1306 aa25.97■■□□□ 1.75
DUSP1-201ENST00000239223 FYB1O15117 783 aa25.97■■□□□ 1.75
DUSP1-201ENST00000239223 PLEKHG3A1L390 1219 aa25.96■■□□□ 1.75
DUSP1-201ENST00000239223 MORC1Q86VD1 984 aa25.96■■□□□ 1.75
DUSP1-201ENST00000239223 ANKRD26Q9UPS8 1709 aa25.95■■□□□ 1.75
DUSP1-201ENST00000239223 PNISRQ8TF01 805 aaKnown RBP25.95■■□□□ 1.75
DUSP1-201ENST00000239223 ANKARQ7Z5J8 1434 aa25.95■■□□□ 1.74
DUSP1-201ENST00000239223 TMEM94Q12767 1356 aa25.95■■□□□ 1.74
DUSP1-201ENST00000239223 EDC4Q6P2E9 1401 aaKnown RBP25.94■■□□□ 1.74
DUSP1-201ENST00000239223 NRKQ7Z2Y5 1582 aa25.94■■□□□ 1.74
DUSP1-201ENST00000239223 NSD2O96028 1365 aa25.93■■□□□ 1.74
DUSP1-201ENST00000239223 ZNF335Q9H4Z2 1342 aaPredicted RBP25.93■■□□□ 1.74
DUSP1-201ENST00000239223 ZRANB1Q9UGI0 708 aa25.92■■□□□ 1.74
DUSP1-201ENST00000239223 XIRP1Q702N8 1843 aaKnown RBP25.91■■□□□ 1.74
DUSP1-201ENST00000239223 SCAF1Q9H7N4 1312 aaKnown RBP25.91■■□□□ 1.74
DUSP1-201ENST00000239223 NME9Q86XW9 330 aa25.91■■□□□ 1.74
DUSP1-201ENST00000239223 USP6P35125 1406 aa25.89■■□□□ 1.74
DUSP1-201ENST00000239223 POLR3AO14802 1390 aaPredicted RBP25.88■■□□□ 1.73
DUSP1-201ENST00000239223 ZNF692Q9BU19 519 aaPredicted RBP25.87■■□□□ 1.73
DUSP1-201ENST00000239223 NGDNQ8NEJ9 315 aaKnown RBP25.87■■□□□ 1.73
DUSP1-201ENST00000239223 SENP3-EIF4A1A0A087X0R7 540 aa25.85■■□□□ 1.73
DUSP1-201ENST00000239223 HNRNPUQ00839 825 aaKnown RBP eCLIP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms