RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SHPRHQ149N8 1683 aa19.8■□□□□ 0.76
DDX55-201ENST00000238146 MORC1Q86VD1 984 aa19.8■□□□□ 0.76
DDX55-201ENST00000238146 BCL2L13Q9BXK5 485 aa19.8■□□□□ 0.76
DDX55-201ENST00000238146 NEURL4Q96JN8 1562 aa19.8■□□□□ 0.76
DDX55-201ENST00000238146 WDR63Q8IWG1 891 aa19.79■□□□□ 0.76
DDX55-201ENST00000238146 TNNT2P45379 298 aaPredicted RBP19.79■□□□□ 0.76
DDX55-201ENST00000238146 IQSEC2Q5JU85 1478 aa19.79■□□□□ 0.76
DDX55-201ENST00000238146 KANK1Q14678 1352 aa19.79■□□□□ 0.76
DDX55-201ENST00000238146 SBNO2Q9Y2G9 1366 aa19.79■□□□□ 0.76
DDX55-201ENST00000238146 RSPH6AQ9H0K4 717 aa19.79■□□□□ 0.76
DDX55-201ENST00000238146 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
DDX55-201ENST00000238146 L1TD1Q5T7N2 865 aaKnown RBP19.78■□□□□ 0.76
DDX55-201ENST00000238146 RWDD1Q9H446 243 aaPredicted RBP19.78■□□□□ 0.76
DDX55-201ENST00000238146 VWDEQ8N2E2 1590 aa19.77■□□□□ 0.76
DDX55-201ENST00000238146 UGGT1Q9NYU2 1555 aa19.77■□□□□ 0.76
DDX55-201ENST00000238146 CHD1O14646 1710 aa19.76■□□□□ 0.75
DDX55-201ENST00000238146 KIF3BO15066 747 aa19.76■□□□□ 0.75
DDX55-201ENST00000238146 CCDC27Q2M243 656 aa19.75■□□□□ 0.75
DDX55-201ENST00000238146 SLC12A5Q9H2X9 1139 aa19.75■□□□□ 0.75
DDX55-201ENST00000238146 ZCCHC11Q5TAX3 1644 aaKnown RBP19.75■□□□□ 0.75
DDX55-201ENST00000238146 MYO3AQ8NEV4 1616 aa19.74■□□□□ 0.75
DDX55-201ENST00000238146 RRAGDQ9NQL2 400 aaPredicted RBP19.73■□□□□ 0.75
DDX55-201ENST00000238146 MTHFSP49914 203 aa19.72■□□□□ 0.75
DDX55-201ENST00000238146 MVPQ14764 893 aaKnown RBP19.72■□□□□ 0.75
DDX55-201ENST00000238146 NRXN1Q9ULB1 1477 aa19.71■□□□□ 0.75
DDX55-201ENST00000238146 SPRYD3Q8NCJ5 442 aa19.71■□□□□ 0.75
DDX55-201ENST00000238146 ZNF518AQ6AHZ1 1483 aa19.7■□□□□ 0.74
DDX55-201ENST00000238146 MCM4P33991 863 aa19.7■□□□□ 0.74
DDX55-201ENST00000238146 MYH16Q9H6N6 1097 aa19.7■□□□□ 0.74
DDX55-201ENST00000238146 XRCC6P12956 609 aaKnown RBP eCLIP19.69■□□□□ 0.748e-8■■■□□ 14.6
DDX55-201ENST00000238146 ATP7AQ04656 1500 aa19.69■□□□□ 0.74
DDX55-201ENST00000238146 IFT172Q9UG01 1749 aa19.69■□□□□ 0.74
DDX55-201ENST00000238146 TRAK1Q9UPV9 953 aa19.69■□□□□ 0.74
DDX55-201ENST00000238146 ARAP3Q8WWN8 1544 aa19.69■□□□□ 0.74
DDX55-201ENST00000238146 FSD2A1L4K1 749 aa19.69■□□□□ 0.74
DDX55-201ENST00000238146 UBE2Q2Q8WVN8 375 aa19.69■□□□□ 0.74
DDX55-201ENST00000238146 ZKSCAN2Q63HK3 967 aa19.68■□□□□ 0.74
DDX55-201ENST00000238146 C22orf23Q9BZE7 217 aa19.68■□□□□ 0.74
DDX55-201ENST00000238146 KIF1BO60333 1816 aa19.68■□□□□ 0.74
DDX55-201ENST00000238146 DZIP1LQ8IYY4 767 aaKnown RBP19.68■□□□□ 0.74
DDX55-201ENST00000238146 CFAP53Q96M91 514 aa19.68■□□□□ 0.74
DDX55-201ENST00000238146 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
DDX55-201ENST00000238146 UHRF1BP1LA0JNW5 1464 aa19.67■□□□□ 0.74
DDX55-201ENST00000238146 MROH1Q8NDA8 1641 aa19.67■□□□□ 0.74
DDX55-201ENST00000238146 INO80Q9ULG1 1556 aaPredicted RBP19.67■□□□□ 0.74
DDX55-201ENST00000238146 GOLGA6L3A6NEY3 463 aa19.67■□□□□ 0.74
DDX55-201ENST00000238146 NOS1P29475 1434 aa19.66■□□□□ 0.74
DDX55-201ENST00000238146 FTSJ3Q8IY81 847 aaKnown RBP19.66■□□□□ 0.74
DDX55-201ENST00000238146 ARXQ96QS3 562 aa19.66■□□□□ 0.74
DDX55-201ENST00000238146 MROH2AA6NES4 1674 aa19.66■□□□□ 0.74
DDX55-201ENST00000238146 CHMP5Q9NZZ3 219 aa19.66■□□□□ 0.74
DDX55-201ENST00000238146 MFAP1P55081 439 aaKnown RBP19.65■□□□□ 0.74
DDX55-201ENST00000238146 SETBP1Q9Y6X0 1596 aa19.65■□□□□ 0.74
DDX55-201ENST00000238146 GZF1Q9H116 711 aaPredicted RBP19.64■□□□□ 0.73
DDX55-201ENST00000238146 U2AF1L5P0DN76 240 aaPredicted RBP19.64■□□□□ 0.73
DDX55-201ENST00000238146 U2AF1Q01081 240 aaKnown RBP eCLIP19.64■□□□□ 0.73
DDX55-201ENST00000238146 EFCAB6Q5THR3 1501 aa19.63■□□□□ 0.73
DDX55-201ENST00000238146 HDAC1Q13547 482 aaPredicted RBP19.62■□□□□ 0.73
DDX55-201ENST00000238146 TSR2Q969E8 191 aaKnown RBP19.62■□□□□ 0.73
DDX55-201ENST00000238146 C14orf93Q9H972 538 aaKnown RBP19.62■□□□□ 0.73
DDX55-201ENST00000238146 USP32Q8NFA0 1604 aa19.62■□□□□ 0.73
DDX55-201ENST00000238146 CT47B1P0C2W7 299 aaPredicted RBP19.62■□□□□ 0.73
DDX55-201ENST00000238146 PANK2Q9BZ23 570 aa19.62■□□□□ 0.73
DDX55-201ENST00000238146 TRAK2O60296 914 aa19.61■□□□□ 0.73
DDX55-201ENST00000238146 TRIM27P14373 513 aa19.61■□□□□ 0.73
DDX55-201ENST00000238146 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
DDX55-201ENST00000238146 TMEM132EQ6IEE7 984 aa19.61■□□□□ 0.73
DDX55-201ENST00000238146 SMC4Q9NTJ3 1288 aa19.61■□□□□ 0.73
DDX55-201ENST00000238146 FANCAO15360 1455 aa19.6■□□□□ 0.73
DDX55-201ENST00000238146 ZC3H13Q5T200 1668 aaKnown RBP19.6■□□□□ 0.73
DDX55-201ENST00000238146 QRICH2Q9H0J4 1663 aa19.6■□□□□ 0.73
DDX55-201ENST00000238146 EXOSC9Q06265 439 aaKnown RBP19.59■□□□□ 0.73
DDX55-201ENST00000238146 ADGRB3O60242 1522 aa19.59■□□□□ 0.73
DDX55-201ENST00000238146 ADGRL1O94910 1474 aa19.59■□□□□ 0.73
DDX55-201ENST00000238146 ADGRB2O60241 1585 aa19.59■□□□□ 0.73
DDX55-201ENST00000238146 ADGRB1O14514 1584 aa19.59■□□□□ 0.73
DDX55-201ENST00000238146 SSH1Q8WYL5 1049 aa19.59■□□□□ 0.73
DDX55-201ENST00000238146 ZNF692Q9BU19 519 aaPredicted RBP19.59■□□□□ 0.73
DDX55-201ENST00000238146 DDX19BQ9UMR2 479 aa19.59■□□□□ 0.73
DDX55-201ENST00000238146 PPRC1Q5VV67 1664 aaKnown RBP19.58■□□□□ 0.73
DDX55-201ENST00000238146 SMC5Q8IY18 1101 aa19.58■□□□□ 0.73
DDX55-201ENST00000238146 ITPRIPQ8IWB1 547 aa19.58■□□□□ 0.72
DDX55-201ENST00000238146 ATF7IPQ6VMQ6 1270 aa19.57■□□□□ 0.72
DDX55-201ENST00000238146 HSCBQ8IWL3 235 aa19.56■□□□□ 0.72
DDX55-201ENST00000238146 ABCA9Q8IUA7 1624 aa19.56■□□□□ 0.72
DDX55-201ENST00000238146 NSD2O96028 1365 aa19.56■□□□□ 0.72
DDX55-201ENST00000238146 ANKRD36BQ8N2N9 1353 aa19.55■□□□□ 0.72
DDX55-201ENST00000238146 CD109Q6YHK3 1445 aa19.55■□□□□ 0.72
DDX55-201ENST00000238146 PLEKHF1Q96S99 279 aa19.55■□□□□ 0.72
DDX55-201ENST00000238146 TRIM35Q9UPQ4 493 aa19.55■□□□□ 0.72
DDX55-201ENST00000238146 MRE11P49959 708 aa19.54■□□□□ 0.72
DDX55-201ENST00000238146 CLCN1P35523 988 aa19.54■□□□□ 0.72
DDX55-201ENST00000238146 DDIT3P35638 169 aa19.54■□□□□ 0.72
DDX55-201ENST00000238146 TMPOP42166 694 aaKnown RBP19.54■□□□□ 0.72
DDX55-201ENST00000238146 NOB1Q9ULX3 412 aaKnown RBP19.54■□□□□ 0.72
DDX55-201ENST00000238146 LMTK2Q8IWU2 1503 aa19.53■□□□□ 0.72
DDX55-201ENST00000238146 PUS7Q96PZ0 661 aaKnown RBP19.53■□□□□ 0.72
DDX55-201ENST00000238146 ZBTB40Q9NUA8 1239 aa19.53■□□□□ 0.72
DDX55-201ENST00000238146 NCOA3Q9Y6Q9 1424 aa19.53■□□□□ 0.72
DDX55-201ENST00000238146 DDX11L8A8MPP1 907 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms