RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 RRP9O43818 475 aaKnown RBP20.35■□□□□ 0.85
DDX1-201ENST00000233084 PRAG1Q86YV5 1406 aa20.35■□□□□ 0.85
DDX1-201ENST00000233084 ST20-MTHFSA0A0A6YYL1 179 aa20.34■□□□□ 0.85
DDX1-201ENST00000233084 C3P01024 1663 aa20.34■□□□□ 0.85
DDX1-201ENST00000233084 XRCC6P12956 609 aaKnown RBP eCLIP20.34■□□□□ 0.85
DDX1-201ENST00000233084 TRPM1Q7Z4N2 1603 aa20.33■□□□□ 0.85
DDX1-201ENST00000233084 PPLO60437 1756 aa20.33■□□□□ 0.85
DDX1-201ENST00000233084 MADDQ8WXG6 1647 aa20.33■□□□□ 0.84
DDX1-201ENST00000233084 IDI1Q13907 227 aa20.32■□□□□ 0.84
DDX1-201ENST00000233084 TMEM131LA2VDJ0 1609 aa20.32■□□□□ 0.84
DDX1-201ENST00000233084 RALGAPBQ86X10 1494 aa20.32■□□□□ 0.84
DDX1-201ENST00000233084 SLC52A1Q9NWF4 448 aa20.31■□□□□ 0.84
DDX1-201ENST00000233084 GOLGA6L3A6NEY3 463 aa20.3■□□□□ 0.84
DDX1-201ENST00000233084 CLCN1P35523 988 aa20.3■□□□□ 0.84
DDX1-201ENST00000233084 CC2D1BQ5T0F9 858 aaKnown RBP20.3■□□□□ 0.84
DDX1-201ENST00000233084 ADAMTSL3P82987 1691 aa20.29■□□□□ 0.84
DDX1-201ENST00000233084 SEC24BO95487 1268 aa20.29■□□□□ 0.84
DDX1-201ENST00000233084 CHGAP10645 457 aaKnown RBP20.28■□□□□ 0.84
DDX1-201ENST00000233084 MYOM2P54296 1465 aa20.28■□□□□ 0.84
DDX1-201ENST00000233084 SPRYD3Q8NCJ5 442 aa20.27■□□□□ 0.84
DDX1-201ENST00000233084 RIMS1Q86UR5 1692 aaKnown RBP20.27■□□□□ 0.84
DDX1-201ENST00000233084 USP19O94966 1318 aa20.27■□□□□ 0.83
DDX1-201ENST00000233084 BECN1Q14457 450 aa20.26■□□□□ 0.83
DDX1-201ENST00000233084 NEXMIFQ5QGS0 1516 aa20.26■□□□□ 0.83
DDX1-201ENST00000233084 PODXL2Q9NZ53 605 aa20.25■□□□□ 0.83
DDX1-201ENST00000233084 PLEKHG5O94827 1062 aa20.24■□□□□ 0.83
DDX1-201ENST00000233084 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
DDX1-201ENST00000233084 CEBPAP49715 358 aaPredicted RBP20.24■□□□□ 0.83
DDX1-201ENST00000233084 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
DDX1-201ENST00000233084 TNRQ92752 1358 aa20.23■□□□□ 0.83
DDX1-201ENST00000233084 KIAA1210Q9ULL0 1709 aa20.22■□□□□ 0.83
DDX1-201ENST00000233084 LAMC1P11047 1609 aa20.21■□□□□ 0.83
DDX1-201ENST00000233084 ADGRF5Q8IZF2 1346 aa20.21■□□□□ 0.83
DDX1-201ENST00000233084 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.83
DDX1-201ENST00000233084 A2ML1A8K2U0 1454 aa20.2■□□□□ 0.82
DDX1-201ENST00000233084 RPGRIP1LQ68CZ1 1315 aa20.2■□□□□ 0.82
DDX1-201ENST00000233084 KDM5AP29375 1690 aaKnown RBP20.2■□□□□ 0.82
DDX1-201ENST00000233084 GPRASP1Q5JY77 1395 aa20.2■□□□□ 0.82
DDX1-201ENST00000233084 NBPF1Q3BBV0 1214 aa20.19■□□□□ 0.82
DDX1-201ENST00000233084 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
DDX1-201ENST00000233084 ANTXR1Q9H6X2 564 aa20.18■□□□□ 0.82
DDX1-201ENST00000233084 FSD2A1L4K1 749 aa20.17■□□□□ 0.82
DDX1-201ENST00000233084 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
DDX1-201ENST00000233084 IGHDP01880 384 aa20.17■□□□□ 0.82
DDX1-201ENST00000233084 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.17■□□□□ 0.82
DDX1-201ENST00000233084 ADAMTS8Q9UP79 889 aa20.17■□□□□ 0.82
DDX1-201ENST00000233084 DUSP27Q5VZP5 1158 aa20.16■□□□□ 0.82
DDX1-201ENST00000233084 NLRP1Q9C000 1473 aa20.15■□□□□ 0.82
DDX1-201ENST00000233084 MYO3AQ8NEV4 1616 aa20.15■□□□□ 0.82
DDX1-201ENST00000233084 ERBB4Q15303 1308 aa20.14■□□□□ 0.82
DDX1-201ENST00000233084 NUTM2DQ5VT03 806 aaPredicted RBP20.14■□□□□ 0.82
DDX1-201ENST00000233084 PLPPR3Q6T4P5 718 aa20.14■□□□□ 0.82
DDX1-201ENST00000233084 ZFYVE9O95405 1425 aa20.14■□□□□ 0.81
DDX1-201ENST00000233084 STAG3Q9UJ98 1225 aa20.14■□□□□ 0.81
DDX1-201ENST00000233084 IQGAP1P46940 1657 aa20.14■□□□□ 0.81
DDX1-201ENST00000233084 BLMP54132 1417 aaPredicted RBP20.14■□□□□ 0.81
DDX1-201ENST00000233084 ESPNB1AK53 854 aa20.13■□□□□ 0.81
DDX1-201ENST00000233084 MCM4P33991 863 aa20.12■□□□□ 0.81
DDX1-201ENST00000233084 TBC1D2Q9BYX2 928 aa20.12■□□□□ 0.81
DDX1-201ENST00000233084 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
DDX1-201ENST00000233084 PER1O15534 1290 aaPredicted RBP20.12■□□□□ 0.81
DDX1-201ENST00000233084 PLEKHH1Q9ULM0 1364 aa20.11■□□□□ 0.81
DDX1-201ENST00000233084 CFAP70Q5T0N1 1121 aa20.11■□□□□ 0.81
DDX1-201ENST00000233084 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
DDX1-201ENST00000233084 TRAK2O60296 914 aa20.1■□□□□ 0.81
DDX1-201ENST00000233084 BCAR3O75815 825 aa20.1■□□□□ 0.81
DDX1-201ENST00000233084 RIMS2Q9UQ26 1411 aa20.09■□□□□ 0.81
DDX1-201ENST00000233084 SETBP1Q9Y6X0 1596 aa20.09■□□□□ 0.81
DDX1-201ENST00000233084 MRE11P49959 708 aa20.09■□□□□ 0.81
DDX1-201ENST00000233084 GOLGA2Q08379 1002 aa20.09■□□□□ 0.81
DDX1-201ENST00000233084 TRIM44Q96DX7 344 aaPredicted RBP20.08■□□□□ 0.8
DDX1-201ENST00000233084 ADGRB1O14514 1584 aa20.07■□□□□ 0.8
DDX1-201ENST00000233084 UPF2Q9HAU5 1272 aaKnown RBP20.07■□□□□ 0.8
DDX1-201ENST00000233084 GRPEL1Q9HAV7 217 aa20.07■□□□□ 0.8
DDX1-201ENST00000233084 PANK3Q9H999 370 aa20.07■□□□□ 0.8
DDX1-201ENST00000233084 C14orf93Q9H972 538 aaKnown RBP20.06■□□□□ 0.8
DDX1-201ENST00000233084 SETD1BQ9UPS6 1966 aaKnown RBP20.06■□□□□ 0.8
DDX1-201ENST00000233084 PTPRMP28827 1452 aa20.06■□□□□ 0.8
DDX1-201ENST00000233084 WDR43Q15061 677 aaKnown RBP eCLIP20.05■□□□□ 0.8
DDX1-201ENST00000233084 CEP170BQ9Y4F5 1589 aaPredicted RBP20.05■□□□□ 0.8
DDX1-201ENST00000233084 ZNF142P52746 1687 aaPredicted RBP20.05■□□□□ 0.8
DDX1-201ENST00000233084 SCAF11Q99590 1463 aaKnown RBP20.05■□□□□ 0.8
DDX1-201ENST00000233084 TMEM2Q9UHN6 1383 aa20.04■□□□□ 0.8
DDX1-201ENST00000233084 NRXN3Q9Y4C0 1643 aa20.04■□□□□ 0.8
DDX1-201ENST00000233084 SETD1AO15047 1707 aaKnown RBP20.04■□□□□ 0.8
DDX1-201ENST00000233084 ASXL1Q8IXJ9 1541 aa20.03■□□□□ 0.8
DDX1-201ENST00000233084 PDCL3Q9H2J4 239 aa20.03■□□□□ 0.8
DDX1-201ENST00000233084 CCDC146Q8IYE0 955 aa20.02■□□□□ 0.8
DDX1-201ENST00000233084 ALKQ9UM73 1620 aa20.02■□□□□ 0.8
DDX1-201ENST00000233084 SLIT1O75093 1534 aa20.02■□□□□ 0.79
DDX1-201ENST00000233084 A0A0U1RQG5 324 aaPredicted RBP20.02■□□□□ 0.79
DDX1-201ENST00000233084 SPINK5Q9NQ38 1064 aaPredicted RBP20.02■□□□□ 0.79
DDX1-201ENST00000233084 MAPK8IP3Q9UPT6 1336 aa20.01■□□□□ 0.79
DDX1-201ENST00000233084 TBC1D32Q96NH3 1257 aa20.01■□□□□ 0.79
DDX1-201ENST00000233084 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
DDX1-201ENST00000233084 COG6Q9Y2V7 657 aa20.01■□□□□ 0.79
DDX1-201ENST00000233084 ARHGAP23Q9P227 1491 aa20■□□□□ 0.79
DDX1-201ENST00000233084 RBM10P98175 930 aaKnown RBP20■□□□□ 0.79
DDX1-201ENST00000233084 EIF3AQ14152 1382 aaKnown RBP20■□□□□ 0.79
DDX1-201ENST00000233084 VIRMAQ69YN4 1812 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms