RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 KIF14Q15058 1648 aa7.21□□□□□ -1.26
RFX4-201ENST00000229387 CEP120Q8N960 986 aa7.2□□□□□ -1.26
RFX4-201ENST00000229387 ANKRD50Q9ULJ7 1429 aa7.2□□□□□ -1.26
RFX4-201ENST00000229387 ANKRD30AQ9BXX3 1397 aa7.2□□□□□ -1.26
RFX4-201ENST00000229387 AFAP1Q8N556 730 aa7.2□□□□□ -1.26
RFX4-201ENST00000229387 TCOF1Q13428 1488 aaKnown RBP7.2□□□□□ -1.26
RFX4-201ENST00000229387 MRE11P49959 708 aa7.2□□□□□ -1.26
RFX4-201ENST00000229387 TMCO4Q5TGY1 634 aa7.2□□□□□ -1.26
RFX4-201ENST00000229387 POGKQ9P215 609 aa7.2□□□□□ -1.26
RFX4-201ENST00000229387 SMG6Q86US8 1419 aaKnown RBP7.2□□□□□ -1.26
RFX4-201ENST00000229387 KDM5BQ9UGL1 1544 aa7.19□□□□□ -1.26
RFX4-201ENST00000229387 CCDC7Q96M83 1385 aa7.19□□□□□ -1.26
RFX4-201ENST00000229387 ERBB4Q15303 1308 aa7.19□□□□□ -1.26
RFX4-201ENST00000229387 SOX12O15370 315 aa7.19□□□□□ -1.26
RFX4-201ENST00000229387 APPP05067 770 aa7.19□□□□□ -1.26
RFX4-201ENST00000229387 PRDM10Q9NQV6 1147 aa7.19□□□□□ -1.26
RFX4-201ENST00000229387 KIF15Q9NS87 1388 aa7.19□□□□□ -1.26
RFX4-201ENST00000229387 RAPGEF6Q8TEU7 1601 aa7.19□□□□□ -1.26
RFX4-201ENST00000229387 AKNAQ7Z591 1439 aa7.19□□□□□ -1.26
RFX4-201ENST00000229387 ZMYND10O75800 440 aa7.19□□□□□ -1.26
RFX4-201ENST00000229387 RALBP1Q15311 655 aa7.18□□□□□ -1.26
RFX4-201ENST00000229387 PLCD4Q9BRC7 762 aa7.18□□□□□ -1.26
RFX4-201ENST00000229387 FAM117AQ9C073 453 aa7.18□□□□□ -1.26
RFX4-201ENST00000229387 FAM13BQ9NYF5 915 aa7.18□□□□□ -1.26
RFX4-201ENST00000229387 MAGI1Q96QZ7 1491 aaPredicted RBP7.18□□□□□ -1.26
RFX4-201ENST00000229387 USP47Q96K76 1375 aa7.17□□□□□ -1.26
RFX4-201ENST00000229387 IRX5P78411 483 aaPredicted RBP7.17□□□□□ -1.26
RFX4-201ENST00000229387 CARD10Q9BWT7 1032 aa7.17□□□□□ -1.26
RFX4-201ENST00000229387 CC2D1BQ5T0F9 858 aaKnown RBP7.17□□□□□ -1.26
RFX4-201ENST00000229387 MYH16Q9H6N6 1097 aa7.17□□□□□ -1.26
RFX4-201ENST00000229387 C9orf84Q5VXU9 1444 aa7.17□□□□□ -1.26
RFX4-201ENST00000229387 PZPP20742 1482 aa7.16□□□□□ -1.26
RFX4-201ENST00000229387 PATL2C9JE40 543 aaKnown RBP7.16□□□□□ -1.26
RFX4-201ENST00000229387 RPRD2Q5VT52 1461 aaKnown RBP7.16□□□□□ -1.26
RFX4-201ENST00000229387 NUP160Q12769 1436 aa7.16□□□□□ -1.26
RFX4-201ENST00000229387 TMED8Q6PL24 325 aaPredicted RBP7.16□□□□□ -1.26
RFX4-201ENST00000229387 TMC1Q8TDI8 760 aa7.16□□□□□ -1.26
RFX4-201ENST00000229387 ROCK1Q13464 1354 aa7.15□□□□□ -1.26
RFX4-201ENST00000229387 ERCC6L2Q5T890 1561 aa7.15□□□□□ -1.26
RFX4-201ENST00000229387 RETREG2Q8NC44 543 aa7.15□□□□□ -1.26
RFX4-201ENST00000229387 TSPYL1Q9H0U9 437 aa7.15□□□□□ -1.26
RFX4-201ENST00000229387 NBPF20Q3BBV1 942 aa7.15□□□□□ -1.27
RFX4-201ENST00000229387 IRF5Q13568 498 aa7.14□□□□□ -1.27
RFX4-201ENST00000229387 FAM43BQ6ZT52 329 aaPredicted RBP7.14□□□□□ -1.27
RFX4-201ENST00000229387 KIAA1107Q9UPP5 1409 aa7.14□□□□□ -1.27
RFX4-201ENST00000229387 NUTM2DQ5VT03 806 aaPredicted RBP7.14□□□□□ -1.27
RFX4-201ENST00000229387 PANK2Q9BZ23 570 aa7.14□□□□□ -1.27
RFX4-201ENST00000229387 CNTLNQ9NXG0 1405 aa7.14□□□□□ -1.27
RFX4-201ENST00000229387 STK24Q9Y6E0 443 aa7.14□□□□□ -1.27
RFX4-201ENST00000229387 ROCK2O75116 1388 aaKnown RBP7.14□□□□□ -1.27
RFX4-201ENST00000229387 SETQ01105 290 aaPredicted RBP7.13□□□□□ -1.27
RFX4-201ENST00000229387 TEX14Q8IWB6 1497 aa7.13□□□□□ -1.27
RFX4-201ENST00000229387 EGFL6Q8IUX8 553 aa7.13□□□□□ -1.27
RFX4-201ENST00000229387 EFCC1Q9HA90 598 aa7.13□□□□□ -1.27
RFX4-201ENST00000229387 TULP2O00295 520 aa7.12□□□□□ -1.27
RFX4-201ENST00000229387 ZSCAN30Q86W11 494 aa7.12□□□□□ -1.27
RFX4-201ENST00000229387 E9PSI1 815 aa7.12□□□□□ -1.27
RFX4-201ENST00000229387 NGEFQ8N5V2 710 aa7.12□□□□□ -1.27
RFX4-201ENST00000229387 KIF3BO15066 747 aa7.12□□□□□ -1.27
RFX4-201ENST00000229387 ZNF592Q92610 1267 aa7.12□□□□□ -1.27
RFX4-201ENST00000229387 DNMT1P26358 1616 aaKnown RBP7.12□□□□□ -1.27
RFX4-201ENST00000229387 UQCRHLA0A096LP55 91 aa7.11□□□□□ -1.27
RFX4-201ENST00000229387 UQCRHP07919 91 aa7.11□□□□□ -1.27
RFX4-201ENST00000229387 HS1BP3Q53T59 392 aa7.11□□□□□ -1.27
RFX4-201ENST00000229387 GRPEL1Q9HAV7 217 aa7.11□□□□□ -1.27
RFX4-201ENST00000229387 CGNQ9P2M7 1197 aaKnown RBP7.11□□□□□ -1.27
RFX4-201ENST00000229387 PUS7Q96PZ0 661 aaKnown RBP7.11□□□□□ -1.27
RFX4-201ENST00000229387 ARHGAP5Q13017 1502 aa7.11□□□□□ -1.27
RFX4-201ENST00000229387 PLEKHH2Q8IVE3 1493 aa7.11□□□□□ -1.27
RFX4-201ENST00000229387 ZNF500O60304 480 aaPredicted RBP7.11□□□□□ -1.27
RFX4-201ENST00000229387 EFCAB2Q5VUJ9 269 aa7.11□□□□□ -1.27
RFX4-201ENST00000229387 PPP1R9BQ96SB3 815 aa7.1□□□□□ -1.27
RFX4-201ENST00000229387 ABCC10Q5T3U5 1492 aa7.1□□□□□ -1.27
RFX4-201ENST00000229387 CSPP1Q1MSJ5 1256 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 GGT6Q6P531 493 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 FBXW7Q969H0 707 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 NUDCQ9Y266 331 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 CCDC144AA2RUR9 1427 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 SPATA31E1Q6ZUB1 1445 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 SLC4A3P48751 1232 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 NINLQ9Y2I6 1382 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 SPAG9O60271 1321 aaKnown RBP7.09□□□□□ -1.27
RFX4-201ENST00000229387 GCC2Q8IWJ2 1684 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 TESPA1A2RU30 521 aaPredicted RBP7.09□□□□□ -1.27
RFX4-201ENST00000229387 CCDC66A2RUB6 948 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 RIOK3O14730 519 aaKnown RBP7.09□□□□□ -1.27
RFX4-201ENST00000229387 HSP90AB3PQ58FF7 597 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 RBM26Q5T8P6 1007 aaKnown RBP7.09□□□□□ -1.27
RFX4-201ENST00000229387 PANK3Q9H999 370 aa7.09□□□□□ -1.27
RFX4-201ENST00000229387 SYCP2Q9BX26 1530 aa7.08□□□□□ -1.28
RFX4-201ENST00000229387 CARNS1A5YM72 827 aa7.08□□□□□ -1.28
RFX4-201ENST00000229387 CCDC173Q0VFZ6 552 aa7.08□□□□□ -1.28
RFX4-201ENST00000229387 FAM177A1Q8N128 213 aaPredicted RBP7.08□□□□□ -1.28
RFX4-201ENST00000229387 MBD5Q9P267 1494 aa7.08□□□□□ -1.28
RFX4-201ENST00000229387 TRAK2O60296 914 aa7.08□□□□□ -1.28
RFX4-201ENST00000229387 SASS6Q6UVJ0 657 aa7.08□□□□□ -1.28
RFX4-201ENST00000229387 CERS3Q8IU89 383 aa7.08□□□□□ -1.28
RFX4-201ENST00000229387 TRAPPC8Q9Y2L5 1435 aa7.08□□□□□ -1.28
RFX4-201ENST00000229387 KCNJ4P48050 445 aa7.08□□□□□ -1.28
RFX4-201ENST00000229387 CDCA7LQ96GN5 454 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms