RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 RWDD1Q9H446 243 aaPredicted RBP13.05□□□□□ -0.32
FOXN1-201ENST00000226247 KIAA1211Q6ZU35 1233 aa13.04□□□□□ -0.32
FOXN1-201ENST00000226247 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
FOXN1-201ENST00000226247 ITSN2Q9NZM3 1697 aa13.04□□□□□ -0.32
FOXN1-201ENST00000226247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.04□□□□□ -0.32
FOXN1-201ENST00000226247 TCP11L2Q8N4U5 519 aa13.04□□□□□ -0.32
FOXN1-201ENST00000226247 TRPM1Q7Z4N2 1603 aa13.04□□□□□ -0.32
FOXN1-201ENST00000226247 ADGRL1O94910 1474 aa13.04□□□□□ -0.32
FOXN1-201ENST00000226247 TTC37Q6PGP7 1564 aa13.03□□□□□ -0.32
FOXN1-201ENST00000226247 CHMP5Q9NZZ3 219 aa13.03□□□□□ -0.32
FOXN1-201ENST00000226247 ERBB4Q15303 1308 aa13.03□□□□□ -0.32
FOXN1-201ENST00000226247 CARD14Q9BXL6 1004 aa13.03□□□□□ -0.32
FOXN1-201ENST00000226247 UHRF1BP1LA0JNW5 1464 aa13.02□□□□□ -0.32
FOXN1-201ENST00000226247 RSPH4AQ5TD94 716 aa13.02□□□□□ -0.33
FOXN1-201ENST00000226247 MORC1Q86VD1 984 aa13.02□□□□□ -0.33
FOXN1-201ENST00000226247 HSCBQ8IWL3 235 aa13.01□□□□□ -0.33
FOXN1-201ENST00000226247 PLCH2O75038 1416 aa13.01□□□□□ -0.33
FOXN1-201ENST00000226247 CFAP70Q5T0N1 1121 aa13.01□□□□□ -0.33
FOXN1-201ENST00000226247 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
FOXN1-201ENST00000226247 SYCP2Q9BX26 1530 aa13.01□□□□□ -0.33
FOXN1-201ENST00000226247 FSD2A1L4K1 749 aa13□□□□□ -0.33
FOXN1-201ENST00000226247 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
FOXN1-201ENST00000226247 MRE11P49959 708 aa13□□□□□ -0.33
FOXN1-201ENST00000226247 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
FOXN1-201ENST00000226247 AAMPQ13685 434 aa12.99□□□□□ -0.33
FOXN1-201ENST00000226247 ITPRIPQ8IWB1 547 aa12.99□□□□□ -0.33
FOXN1-201ENST00000226247 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
FOXN1-201ENST00000226247 R3HCC1Q9Y3T6 440 aaKnown RBP12.99□□□□□ -0.33
FOXN1-201ENST00000226247 CDC42BPAQ5VT25 1732 aa12.99□□□□□ -0.33
FOXN1-201ENST00000226247 CROCC2H7BZ55 1655 aa12.99□□□□□ -0.33
FOXN1-201ENST00000226247 FBXO31Q5XUX0 539 aaPredicted RBP12.98□□□□□ -0.33
FOXN1-201ENST00000226247 PRDM15P57071 1507 aaPredicted RBP12.98□□□□□ -0.33
FOXN1-201ENST00000226247 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
FOXN1-201ENST00000226247 U2AF1L5P0DN76 240 aaPredicted RBP12.97□□□□□ -0.33
FOXN1-201ENST00000226247 U2AF1Q01081 240 aaKnown RBP eCLIP12.97□□□□□ -0.33
FOXN1-201ENST00000226247 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
FOXN1-201ENST00000226247 PDE4CQ08493 712 aa12.97□□□□□ -0.33
FOXN1-201ENST00000226247 SMC4Q9NTJ3 1288 aa12.97□□□□□ -0.33
FOXN1-201ENST00000226247 ASXL1Q8IXJ9 1541 aa12.97□□□□□ -0.33
FOXN1-201ENST00000226247 RUNDC1Q96C34 613 aa12.97□□□□□ -0.33
FOXN1-201ENST00000226247 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
FOXN1-201ENST00000226247 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.33
FOXN1-201ENST00000226247 GAS2L3Q86XJ1 694 aa12.96□□□□□ -0.33
FOXN1-201ENST00000226247 SHANK2Q9UPX8 1470 aa12.96□□□□□ -0.33
FOXN1-201ENST00000226247 MTHFSP49914 203 aa12.96□□□□□ -0.33
FOXN1-201ENST00000226247 DZIP1LQ8IYY4 767 aaKnown RBP12.96□□□□□ -0.33
FOXN1-201ENST00000226247 NLRP1Q9C000 1473 aa12.96□□□□□ -0.34
FOXN1-201ENST00000226247 PIK3C2GO75747 1445 aa12.96□□□□□ -0.34
FOXN1-201ENST00000226247 YEATS2Q9ULM3 1422 aa12.96□□□□□ -0.34
FOXN1-201ENST00000226247 NCLP19338 710 aaKnown RBP12.95□□□□□ -0.34
FOXN1-201ENST00000226247 LNPKQ9C0E8 428 aa12.95□□□□□ -0.34
FOXN1-201ENST00000226247 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
FOXN1-201ENST00000226247 ZKSCAN2Q63HK3 967 aa12.95□□□□□ -0.34
FOXN1-201ENST00000226247 PDCL3Q9H2J4 239 aa12.95□□□□□ -0.34
FOXN1-201ENST00000226247 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
FOXN1-201ENST00000226247 SAMD9LQ8IVG5 1584 aa12.94□□□□□ -0.34
FOXN1-201ENST00000226247 MSNP26038 577 aaKnown RBP12.94□□□□□ -0.34
FOXN1-201ENST00000226247 TRAK1Q9UPV9 953 aa12.94□□□□□ -0.34
FOXN1-201ENST00000226247 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
FOXN1-201ENST00000226247 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
FOXN1-201ENST00000226247 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
FOXN1-201ENST00000226247 CDC42BPBQ9Y5S2 1711 aa12.92□□□□□ -0.34
FOXN1-201ENST00000226247 FGD1P98174 961 aa12.92□□□□□ -0.34
FOXN1-201ENST00000226247 EXOSC9Q06265 439 aaKnown RBP12.92□□□□□ -0.34
FOXN1-201ENST00000226247 MPNDQ8N594 471 aa12.91□□□□□ -0.34
FOXN1-201ENST00000226247 ANP32BQ92688 251 aaKnown RBP12.91□□□□□ -0.34
FOXN1-201ENST00000226247 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
FOXN1-201ENST00000226247 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
FOXN1-201ENST00000226247 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
FOXN1-201ENST00000226247 MYO5CQ9NQX4 1742 aa12.9□□□□□ -0.34
FOXN1-201ENST00000226247 TRIM27P14373 513 aa12.9□□□□□ -0.34
FOXN1-201ENST00000226247 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
FOXN1-201ENST00000226247 ADGRF5Q8IZF2 1346 aa12.9□□□□□ -0.34
FOXN1-201ENST00000226247 SAFB2Q14151 953 aaKnown RBP eCLIP12.9□□□□□ -0.34
FOXN1-201ENST00000226247 NGEFQ8N5V2 710 aa12.9□□□□□ -0.34
FOXN1-201ENST00000226247 SCAF11Q99590 1463 aaKnown RBP12.9□□□□□ -0.34
FOXN1-201ENST00000226247 NINLQ9Y2I6 1382 aa12.9□□□□□ -0.34
FOXN1-201ENST00000226247 CFAP53Q96M91 514 aa12.9□□□□□ -0.35
FOXN1-201ENST00000226247 GBP4Q96PP9 640 aa12.9□□□□□ -0.35
FOXN1-201ENST00000226247 NOB1Q9ULX3 412 aaKnown RBP12.9□□□□□ -0.35
FOXN1-201ENST00000226247 TPM2P07951 284 aa12.89□□□□□ -0.35
FOXN1-201ENST00000226247 XPCQ01831 940 aaPredicted RBP12.89□□□□□ -0.35
FOXN1-201ENST00000226247 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
FOXN1-201ENST00000226247 TMEM132EQ6IEE7 984 aa12.89□□□□□ -0.35
FOXN1-201ENST00000226247 WDR63Q8IWG1 891 aa12.88□□□□□ -0.35
FOXN1-201ENST00000226247 CFAP65Q6ZU64 1925 aaKnown RBP12.88□□□□□ -0.35
FOXN1-201ENST00000226247 TMEM57Q8N5G2 664 aa12.88□□□□□ -0.35
FOXN1-201ENST00000226247 CD2BP2O95400 341 aaKnown RBP12.88□□□□□ -0.35
FOXN1-201ENST00000226247 ANKRD45Q5TZF3 282 aa12.88□□□□□ -0.35
FOXN1-201ENST00000226247 C1orf115Q9H7X2 142 aa12.88□□□□□ -0.35
FOXN1-201ENST00000226247 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
FOXN1-201ENST00000226247 DDX49Q9Y6V7 483 aaKnown RBP12.87□□□□□ -0.35
FOXN1-201ENST00000226247 IGSF3O75054 1194 aa12.87□□□□□ -0.35
FOXN1-201ENST00000226247 PRDM4Q9UKN5 801 aa12.87□□□□□ -0.35
FOXN1-201ENST00000226247 SSFA2P28290 1259 aa12.87□□□□□ -0.35
FOXN1-201ENST00000226247 DNTTIP2Q5QJE6 756 aaKnown RBP12.86□□□□□ -0.35
FOXN1-201ENST00000226247 CHMP4BQ9H444 224 aaKnown RBP12.86□□□□□ -0.35
FOXN1-201ENST00000226247 DDX19BQ9UMR2 479 aa12.86□□□□□ -0.35
FOXN1-201ENST00000226247 NSD3Q9BZ95 1437 aa12.86□□□□□ -0.35
FOXN1-201ENST00000226247 UQCRHLA0A096LP55 91 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms