RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CSPP1Q1MSJ5 1256 aa22.66■■□□□ 1.22
CLIP2-201ENST00000223398 ANO2Q9NQ90 1003 aa22.65■■□□□ 1.22
CLIP2-201ENST00000223398 RUFY2Q8WXA3 655 aa22.65■■□□□ 1.22
CLIP2-201ENST00000223398 PRKAR2BP31323 418 aa22.64■■□□□ 1.22
CLIP2-201ENST00000223398 PES1O00541 588 aaKnown RBP22.64■■□□□ 1.21
CLIP2-201ENST00000223398 PLEKHO1Q53GL0 409 aaPredicted RBP22.64■■□□□ 1.21
CLIP2-201ENST00000223398 SLC4A3P48751 1232 aa22.63■■□□□ 1.21
CLIP2-201ENST00000223398 ADAMTS8Q9UP79 889 aa22.63■■□□□ 1.21
CLIP2-201ENST00000223398 CCDC27Q2M243 656 aa22.63■■□□□ 1.21
CLIP2-201ENST00000223398 TCEAL9Q9UHQ7 104 aa22.63■■□□□ 1.21
CLIP2-201ENST00000223398 ZKSCAN1P17029 563 aaPredicted RBP22.61■■□□□ 1.21
CLIP2-201ENST00000223398 TATP17735 454 aaPredicted RBP22.61■■□□□ 1.21
CLIP2-201ENST00000223398 UBTFL1P0CB47 393 aaPredicted RBP22.6■■□□□ 1.21
CLIP2-201ENST00000223398 ROCK1Q13464 1354 aa22.6■■□□□ 1.21
CLIP2-201ENST00000223398 PANK1Q8TE04 598 aa22.6■■□□□ 1.21
CLIP2-201ENST00000223398 GAS2L2Q8NHY3 880 aa22.6■■□□□ 1.21
CLIP2-201ENST00000223398 SLC52A1Q9NWF4 448 aa22.6■■□□□ 1.21
CLIP2-201ENST00000223398 TCP11L2Q8N4U5 519 aa22.6■■□□□ 1.21
CLIP2-201ENST00000223398 TROQ12816 1431 aaPredicted RBP22.59■■□□□ 1.21
CLIP2-201ENST00000223398 TRDNQ13061 729 aa22.59■■□□□ 1.21
CLIP2-201ENST00000223398 WASHC4Q2M389 1173 aa22.59■■□□□ 1.21
CLIP2-201ENST00000223398 NFXL1Q6ZNB6 911 aa22.59■■□□□ 1.21
CLIP2-201ENST00000223398 LNPKQ9C0E8 428 aa22.59■■□□□ 1.21
CLIP2-201ENST00000223398 DEKP35659 375 aaKnown RBP22.59■■□□□ 1.21
CLIP2-201ENST00000223398 FAM161AQ3B820 660 aa22.59■■□□□ 1.21
CLIP2-201ENST00000223398 NOC3LQ8WTT2 800 aaKnown RBP22.59■■□□□ 1.21
CLIP2-201ENST00000223398 CPLX2Q6PUV4 134 aaKnown RBP22.58■■□□□ 1.21
CLIP2-201ENST00000223398 IPO9Q96P70 1041 aaKnown RBP22.58■■□□□ 1.21
CLIP2-201ENST00000223398 CPLX1O14810 134 aa22.58■■□□□ 1.21
CLIP2-201ENST00000223398 SF3B2Q13435 895 aaKnown RBP22.58■■□□□ 1.21
CLIP2-201ENST00000223398 CWC22Q9HCG8 908 aaKnown RBP22.58■■□□□ 1.2
CLIP2-201ENST00000223398 SULT6B1Q6IMI4 303 aa22.57■■□□□ 1.2
CLIP2-201ENST00000223398 PRDM11Q9NQV5 511 aa22.57■■□□□ 1.2
CLIP2-201ENST00000223398 SMG6Q86US8 1419 aaKnown RBP22.57■■□□□ 1.2
CLIP2-201ENST00000223398 POGZQ7Z3K3 1410 aa22.57■■□□□ 1.2
CLIP2-201ENST00000223398 PRM3Q9NNZ6 103 aa22.57■■□□□ 1.2
CLIP2-201ENST00000223398 MTMR7Q9Y216 660 aa22.56■■□□□ 1.2
CLIP2-201ENST00000223398 PLEKHH2Q8IVE3 1493 aa22.56■■□□□ 1.2
CLIP2-201ENST00000223398 KIF6Q6ZMV9 814 aa22.56■■□□□ 1.2
CLIP2-201ENST00000223398 PDE4AP27815 886 aa22.56■■□□□ 1.2
CLIP2-201ENST00000223398 TRIM29Q14134 588 aa22.56■■□□□ 1.2
CLIP2-201ENST00000223398 FOSBP53539 338 aa22.55■■□□□ 1.2
CLIP2-201ENST00000223398 TPD52L1Q16890 204 aaPredicted RBP22.55■■□□□ 1.2
CLIP2-201ENST00000223398 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.55■■□□□ 1.2
CLIP2-201ENST00000223398 REC8O95072 547 aa22.55■■□□□ 1.2
CLIP2-201ENST00000223398 WWC1Q8IX03 1113 aa22.55■■□□□ 1.2
CLIP2-201ENST00000223398 PPP2R1AP30153 589 aa22.55■■□□□ 1.2
CLIP2-201ENST00000223398 CABP4P57796 275 aa22.54■■□□□ 1.2
CLIP2-201ENST00000223398 ERICH3Q5RHP9 1530 aa22.54■■□□□ 1.2
CLIP2-201ENST00000223398 WASHC2AQ641Q2 1341 aa22.54■■□□□ 1.2
CLIP2-201ENST00000223398 RTEL1-TNFRSF6BF6WH68 1400 aa22.54■■□□□ 1.2
CLIP2-201ENST00000223398 HSP90AB4PQ58FF6 505 aa22.54■■□□□ 1.2
CLIP2-201ENST00000223398 ERBINQ96RT1 1412 aa22.54■■□□□ 1.2
CLIP2-201ENST00000223398 ZC3H6P61129 1189 aaKnown RBP22.53■■□□□ 1.2
CLIP2-201ENST00000223398 CCDC30Q5VVM6 783 aa22.53■■□□□ 1.2
CLIP2-201ENST00000223398 ZNF530Q6P9A1 599 aaPredicted RBP22.52■■□□□ 1.2
CLIP2-201ENST00000223398 ERICH2A1L162 156 aa22.52■■□□□ 1.2
CLIP2-201ENST00000223398 RRS1Q15050 365 aaKnown RBP22.52■■□□□ 1.2
CLIP2-201ENST00000223398 GOLGA6L3A6NEY3 463 aa22.52■■□□□ 1.19
CLIP2-201ENST00000223398 CNTLNQ9NXG0 1405 aa22.52■■□□□ 1.19
CLIP2-201ENST00000223398 ERC2O15083 957 aa22.51■■□□□ 1.19
CLIP2-201ENST00000223398 EHBP1L1Q8N3D4 1523 aa22.51■■□□□ 1.19
CLIP2-201ENST00000223398 HFM1A2PYH4 1435 aa22.51■■□□□ 1.19
CLIP2-201ENST00000223398 ZNF692Q9BU19 519 aaPredicted RBP22.51■■□□□ 1.19
CLIP2-201ENST00000223398 RNF20Q5VTR2 975 aa22.5■■□□□ 1.19
CLIP2-201ENST00000223398 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
CLIP2-201ENST00000223398 EXOSC9Q06265 439 aaKnown RBP22.5■■□□□ 1.19
CLIP2-201ENST00000223398 CHMP4CQ96CF2 233 aa22.5■■□□□ 1.19
CLIP2-201ENST00000223398 CDK13Q14004 1512 aaKnown RBP22.5■■□□□ 1.19
CLIP2-201ENST00000223398 DCAF8L1A6NGE4 600 aa22.49■■□□□ 1.19
CLIP2-201ENST00000223398 TSHZ2Q9NRE2 1034 aa22.49■■□□□ 1.19
CLIP2-201ENST00000223398 EFCAB5A4FU69 1503 aa22.49■■□□□ 1.19
CLIP2-201ENST00000223398 KIAA1107Q9UPP5 1409 aa22.49■■□□□ 1.19
CLIP2-201ENST00000223398 KDM4AO75164 1064 aa22.48■■□□□ 1.19
CLIP2-201ENST00000223398 NBPF8Q3BBV2 869 aa22.48■■□□□ 1.19
CLIP2-201ENST00000223398 TSR2Q969E8 191 aaKnown RBP22.48■■□□□ 1.19
CLIP2-201ENST00000223398 CDCA7LQ96GN5 454 aa22.48■■□□□ 1.19
CLIP2-201ENST00000223398 SURF6O75683 361 aaKnown RBP22.48■■□□□ 1.19
CLIP2-201ENST00000223398 TWISTNBQ3B726 338 aaPredicted RBP22.47■■□□□ 1.19
CLIP2-201ENST00000223398 DNMBPQ6XZF7 1577 aa22.47■■□□□ 1.19
CLIP2-201ENST00000223398 HECW1Q76N89 1606 aa22.47■■□□□ 1.19
CLIP2-201ENST00000223398 MYL6BP14649 208 aa22.47■■□□□ 1.19
CLIP2-201ENST00000223398 CEBPAP49715 358 aaPredicted RBP22.47■■□□□ 1.19
CLIP2-201ENST00000223398 DNAJC2Q99543 621 aaKnown RBP22.47■■□□□ 1.19
CLIP2-201ENST00000223398 ARID3AQ99856 593 aa22.47■■□□□ 1.19
CLIP2-201ENST00000223398 CEP89Q96ST8 783 aa22.47■■□□□ 1.19
CLIP2-201ENST00000223398 CD109Q6YHK3 1445 aa22.46■■□□□ 1.19
CLIP2-201ENST00000223398 HDGFL1Q5TGJ6 251 aa22.46■■□□□ 1.19
CLIP2-201ENST00000223398 C1orf115Q9H7X2 142 aa22.46■■□□□ 1.19
CLIP2-201ENST00000223398 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
CLIP2-201ENST00000223398 ATP6V1DQ9Y5K8 247 aa22.45■■□□□ 1.19
CLIP2-201ENST00000223398 RALYLQ86SE5 291 aaKnown RBP22.45■■□□□ 1.18
CLIP2-201ENST00000223398 SPG7Q9UQ90 795 aa22.45■■□□□ 1.18
CLIP2-201ENST00000223398 PHF14O94880 888 aa22.45■■□□□ 1.18
CLIP2-201ENST00000223398 WAPLQ7Z5K2 1190 aa22.45■■□□□ 1.18
CLIP2-201ENST00000223398 DDX49Q9Y6V7 483 aaKnown RBP22.45■■□□□ 1.18
CLIP2-201ENST00000223398 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
CLIP2-201ENST00000223398 FSD1Q9BTV5 496 aa22.44■■□□□ 1.18
CLIP2-201ENST00000223398 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
CLIP2-201ENST00000223398 CNNM1Q9NRU3 951 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms