RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 CENPJQ9HC77 1338 aaPredicted RBP21.21■□□□□ 0.99
RPA3-201ENST00000223129 ZEB1P37275 1124 aaPredicted RBP21.21■□□□□ 0.99
RPA3-201ENST00000223129 MSH6P52701 1360 aa21.21■□□□□ 0.99
RPA3-201ENST00000223129 ADGRL3Q9HAR2 1447 aa21.2■□□□□ 0.98
RPA3-201ENST00000223129 EIF3AQ14152 1382 aaKnown RBP21.19■□□□□ 0.98
RPA3-201ENST00000223129 USP47Q96K76 1375 aa21.19■□□□□ 0.98
RPA3-201ENST00000223129 ST20-MTHFSA0A0A6YYL1 179 aa21.18■□□□□ 0.98
RPA3-201ENST00000223129 IQSEC2Q5JU85 1478 aa21.17■□□□□ 0.98
RPA3-201ENST00000223129 QRICH2Q9H0J4 1663 aa21.16■□□□□ 0.98
RPA3-201ENST00000223129 ATF3P18847 181 aa21.16■□□□□ 0.98
RPA3-201ENST00000223129 NUTM2FA1L443 756 aa21.14■□□□□ 0.97
RPA3-201ENST00000223129 EIF4G2P78344 907 aaKnown RBP eCLIP21.14■□□□□ 0.97
RPA3-201ENST00000223129 UBAP1LF5GYI3 381 aa21.13■□□□□ 0.97
RPA3-201ENST00000223129 CADPS2Q86UW7 1296 aa21.13■□□□□ 0.97
RPA3-201ENST00000223129 HSPA5P11021 654 aaKnown RBP21.12■□□□□ 0.97
RPA3-201ENST00000223129 WASLO00401 505 aaPredicted RBP21.11■□□□□ 0.97
RPA3-201ENST00000223129 TESK2Q96S53 571 aa21.11■□□□□ 0.97
RPA3-201ENST00000223129 DCCP43146 1447 aa21.11■□□□□ 0.97
RPA3-201ENST00000223129 TOM1O60784 492 aa21.11■□□□□ 0.97
RPA3-201ENST00000223129 ADGRB2O60241 1585 aa21.1■□□□□ 0.97
RPA3-201ENST00000223129 CDC42BPGQ6DT37 1551 aa21.1■□□□□ 0.97
RPA3-201ENST00000223129 CDK19Q9BWU1 502 aa21.1■□□□□ 0.97
RPA3-201ENST00000223129 SLAIN2Q9P270 581 aa21.1■□□□□ 0.97
RPA3-201ENST00000223129 PIP4K2BP78356 416 aa21.08■□□□□ 0.97
RPA3-201ENST00000223129 MST1RQ04912 1400 aa21.08■□□□□ 0.96
RPA3-201ENST00000223129 FMN2Q9NZ56 1722 aa21.07■□□□□ 0.96
RPA3-201ENST00000223129 CABP2Q9NPB3 220 aa21.07■□□□□ 0.96
RPA3-201ENST00000223129 TULP4Q9NRJ4 1543 aa21.07■□□□□ 0.96
RPA3-201ENST00000223129 SBNO2Q9Y2G9 1366 aa21.06■□□□□ 0.96
RPA3-201ENST00000223129 EVC2Q86UK5 1308 aa21.06■□□□□ 0.96
RPA3-201ENST00000223129 SRPK2P78362 688 aaKnown RBP21.05■□□□□ 0.96
RPA3-201ENST00000223129 SCAF1Q9H7N4 1312 aaKnown RBP21.05■□□□□ 0.96
RPA3-201ENST00000223129 PRR36Q9H6K5 1346 aa21.04■□□□□ 0.96
RPA3-201ENST00000223129 C1orf167Q5SNV9 1468 aa21.04■□□□□ 0.96
RPA3-201ENST00000223129 RGPD8O14715 1765 aaPredicted RBP21.04■□□□□ 0.96
RPA3-201ENST00000223129 ORAI2Q96SN7 254 aa21.04■□□□□ 0.96
RPA3-201ENST00000223129 NUDT16Q96DE0 195 aaKnown RBP21.02■□□□□ 0.96
RPA3-201ENST00000223129 USP32Q8NFA0 1604 aa21.02■□□□□ 0.96
RPA3-201ENST00000223129 ESCO1Q5FWF5 840 aa21.02■□□□□ 0.96
RPA3-201ENST00000223129 DISP3Q9P2K9 1392 aa21.01■□□□□ 0.95
RPA3-201ENST00000223129 TMF1P82094 1093 aa21■□□□□ 0.95
RPA3-201ENST00000223129 BRINP3Q76B58 766 aa21■□□□□ 0.95
RPA3-201ENST00000223129 ATP7BP35670 1465 aa20.99■□□□□ 0.95
RPA3-201ENST00000223129 SLC24A1O60721 1099 aa20.99■□□□□ 0.95
RPA3-201ENST00000223129 ANKARQ7Z5J8 1434 aa20.98■□□□□ 0.95
RPA3-201ENST00000223129 ROBO1Q9Y6N7 1651 aa20.98■□□□□ 0.95
RPA3-201ENST00000223129 PMFBP1Q8TBY8 1022 aa20.97■□□□□ 0.95
RPA3-201ENST00000223129 C11orf95C9JLR9 678 aaPredicted RBP20.97■□□□□ 0.95
RPA3-201ENST00000223129 CCDC61Q9Y6R9 512 aa20.97■□□□□ 0.95
RPA3-201ENST00000223129 FBXO41Q8TF61 875 aa20.96■□□□□ 0.95
RPA3-201ENST00000223129 DDX17Q92841 729 aaKnown RBP20.96■□□□□ 0.95
RPA3-201ENST00000223129 PHF8Q9UPP1 1060 aa20.95■□□□□ 0.94
RPA3-201ENST00000223129 POLR3GLQ9BT43 218 aa20.94■□□□□ 0.94
RPA3-201ENST00000223129 CABP1Q9NZU7 370 aa20.94■□□□□ 0.94
RPA3-201ENST00000223129 FOXO3O43524 673 aa20.93■□□□□ 0.94
RPA3-201ENST00000223129 PPIP5K1Q6PFW1 1433 aa20.92■□□□□ 0.94
RPA3-201ENST00000223129 ATAD2Q6PL18 1390 aa20.92■□□□□ 0.94
RPA3-201ENST00000223129 TOPAZ1Q8N9V7 1692 aa20.91■□□□□ 0.94
RPA3-201ENST00000223129 CDCA8Q53HL2 280 aa20.91■□□□□ 0.94
RPA3-201ENST00000223129 TMC1Q8TDI8 760 aa20.91■□□□□ 0.94
RPA3-201ENST00000223129 PUS7Q96PZ0 661 aaKnown RBP20.91■□□□□ 0.94
RPA3-201ENST00000223129 ITSN1Q15811 1721 aa20.91■□□□□ 0.94
RPA3-201ENST00000223129 XPCQ01831 940 aaPredicted RBP20.9■□□□□ 0.94
RPA3-201ENST00000223129 SLC12A5Q9H2X9 1139 aa20.9■□□□□ 0.94
RPA3-201ENST00000223129 PLEKHG3A1L390 1219 aa20.89■□□□□ 0.93
RPA3-201ENST00000223129 NGDNQ8NEJ9 315 aaKnown RBP20.89■□□□□ 0.93
RPA3-201ENST00000223129 ACEP12821 1306 aa20.88■□□□□ 0.93
RPA3-201ENST00000223129 KIF1AQ12756 1690 aa20.87■□□□□ 0.93
RPA3-201ENST00000223129 KIF7Q2M1P5 1343 aa20.87■□□□□ 0.93
RPA3-201ENST00000223129 HSPA1LP34931 641 aa20.87■□□□□ 0.93
RPA3-201ENST00000223129 PSME1Q06323 249 aa20.86■□□□□ 0.93
RPA3-201ENST00000223129 NPHP3Q7Z494 1330 aa20.85■□□□□ 0.93
RPA3-201ENST00000223129 NHSL1Q5SYE7 1610 aa20.85■□□□□ 0.93
RPA3-201ENST00000223129 KRT28Q7Z3Y7 464 aa20.85■□□□□ 0.93
RPA3-201ENST00000223129 POLR3AO14802 1390 aaPredicted RBP20.84■□□□□ 0.93
RPA3-201ENST00000223129 WASHC2AQ641Q2 1341 aa20.84■□□□□ 0.93
RPA3-201ENST00000223129 PHLPP1O60346 1717 aa20.84■□□□□ 0.93
RPA3-201ENST00000223129 AHDC1Q5TGY3 1603 aaPredicted RBP20.83■□□□□ 0.93
RPA3-201ENST00000223129 SOS2Q07890 1332 aaPredicted RBP20.82■□□□□ 0.92
RPA3-201ENST00000223129 CCDC7Q96M83 1385 aa20.81■□□□□ 0.92
RPA3-201ENST00000223129 CD163L1Q9NR16 1453 aa20.81■□□□□ 0.92
RPA3-201ENST00000223129 MYOM1P52179 1685 aa20.81■□□□□ 0.92
RPA3-201ENST00000223129 PXDNQ92626 1479 aa20.81■□□□□ 0.92
RPA3-201ENST00000223129 ILDR1Q86SU0 546 aaPredicted RBP20.8■□□□□ 0.92
RPA3-201ENST00000223129 CPSF1Q10570 1443 aaKnown RBP20.79■□□□□ 0.92
RPA3-201ENST00000223129 NINLQ9Y2I6 1382 aa20.79■□□□□ 0.92
RPA3-201ENST00000223129 COL16A1Q07092 1604 aaPredicted RBP20.79■□□□□ 0.92
RPA3-201ENST00000223129 A0A1W2PP64 1363 aa20.78■□□□□ 0.92
RPA3-201ENST00000223129 HDGFL2Q7Z4V5 671 aaPredicted RBP20.78■□□□□ 0.92
RPA3-201ENST00000223129 ZNF692Q9BU19 519 aaPredicted RBP20.78■□□□□ 0.92
RPA3-201ENST00000223129 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
RPA3-201ENST00000223129 PAK3O75914 559 aaPredicted RBP20.78■□□□□ 0.92
RPA3-201ENST00000223129 AKAP12Q02952 1782 aa20.78■□□□□ 0.92
RPA3-201ENST00000223129 KTN1Q86UP2 1357 aaKnown RBP20.77■□□□□ 0.92
RPA3-201ENST00000223129 USP6P35125 1406 aa20.77■□□□□ 0.91
RPA3-201ENST00000223129 LRRC59Q96AG4 307 aaKnown RBP20.77■□□□□ 0.91
RPA3-201ENST00000223129 ANKRD36BQ8N2N9 1353 aa20.76■□□□□ 0.91
RPA3-201ENST00000223129 LMOD2Q6P5Q4 547 aa20.75■□□□□ 0.91
RPA3-201ENST00000223129 TRPM3Q9HCF6 1732 aaPredicted RBP20.75■□□□□ 0.91
RPA3-201ENST00000223129 PANK3Q9H999 370 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms