RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 CABP2Q9NPB3 220 aa20.68■□□□□ 0.9
PAF1-201ENST00000221265 PTPRUQ92729 1446 aa20.67■□□□□ 0.9
PAF1-201ENST00000221265 TECPR2O15040 1411 aa20.66■□□□□ 0.9
PAF1-201ENST00000221265 CPS1P31327 1500 aa20.66■□□□□ 0.9
PAF1-201ENST00000221265 SLC12A5Q9H2X9 1139 aa20.65■□□□□ 0.9
PAF1-201ENST00000221265 ROBO2Q9HCK4 1378 aa20.64■□□□□ 0.9
PAF1-201ENST00000221265 TMC1Q8TDI8 760 aa20.64■□□□□ 0.89
PAF1-201ENST00000221265 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
PAF1-201ENST00000221265 TBX22Q9Y458 520 aa20.63■□□□□ 0.89
PAF1-201ENST00000221265 ANKLE2Q86XL3 938 aa20.63■□□□□ 0.89
PAF1-201ENST00000221265 SRPK2P78362 688 aaKnown RBP20.62■□□□□ 0.89
PAF1-201ENST00000221265 CARD14Q9BXL6 1004 aa20.62■□□□□ 0.89
PAF1-201ENST00000221265 KDM4FA0A1W2PPD8 638 aa20.62■□□□□ 0.89
PAF1-201ENST00000221265 DIP2AQ14689 1571 aa20.61■□□□□ 0.89
PAF1-201ENST00000221265 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
PAF1-201ENST00000221265 KNSTRNQ9Y448 316 aa20.61■□□□□ 0.89
PAF1-201ENST00000221265 KTN1Q86UP2 1357 aaKnown RBP20.61■□□□□ 0.89
PAF1-201ENST00000221265 CDK19Q9BWU1 502 aa20.6■□□□□ 0.89
PAF1-201ENST00000221265 PARD3Q8TEW0 1356 aa20.6■□□□□ 0.89
PAF1-201ENST00000221265 AMER1Q5JTC6 1135 aaPredicted RBP20.59■□□□□ 0.89
PAF1-201ENST00000221265 PUS7Q96PZ0 661 aaKnown RBP20.59■□□□□ 0.89
PAF1-201ENST00000221265 MRS2Q9HD23 443 aa20.59■□□□□ 0.89
PAF1-201ENST00000221265 AMOTL2Q9Y2J4 779 aa20.59■□□□□ 0.89
PAF1-201ENST00000221265 SIRT1Q96EB6 747 aa20.58■□□□□ 0.89
PAF1-201ENST00000221265 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.58■□□□□ 0.89
PAF1-201ENST00000221265 RALBP1Q15311 655 aa20.58■□□□□ 0.88
PAF1-201ENST00000221265 XRN1Q8IZH2 1706 aaKnown RBP20.56■□□□□ 0.88
PAF1-201ENST00000221265 MYBBP1AQ9BQG0 1328 aaKnown RBP20.55■□□□□ 0.88
PAF1-201ENST00000221265 NCKAP5LQ9HCH0 1330 aa20.55■□□□□ 0.88
PAF1-201ENST00000221265 NSD3Q9BZ95 1437 aa20.53■□□□□ 0.88
PAF1-201ENST00000221265 CHD2O14647 1828 aaKnown RBP20.53■□□□□ 0.88
PAF1-201ENST00000221265 WASLO00401 505 aaPredicted RBP20.53■□□□□ 0.88
PAF1-201ENST00000221265 ATAD2Q6PL18 1390 aa20.53■□□□□ 0.88
PAF1-201ENST00000221265 NPHP4O75161 1426 aaPredicted RBP20.52■□□□□ 0.88
PAF1-201ENST00000221265 KCNA6P17658 529 aa20.52■□□□□ 0.87
PAF1-201ENST00000221265 PTCH1Q13635 1447 aa20.51■□□□□ 0.87
PAF1-201ENST00000221265 ANKRD36BQ8N2N9 1353 aa20.51■□□□□ 0.87
PAF1-201ENST00000221265 FKBP8Q14318 412 aa20.51■□□□□ 0.87
PAF1-201ENST00000221265 CD163L1Q9NR16 1453 aa20.51■□□□□ 0.87
PAF1-201ENST00000221265 A0A1W2PP64 1363 aa20.51■□□□□ 0.87
PAF1-201ENST00000221265 FAM9BQ8IZU0 186 aa20.5■□□□□ 0.87
PAF1-201ENST00000221265 CABP1Q9NZU7 370 aa20.5■□□□□ 0.87
PAF1-201ENST00000221265 PIK3R4Q99570 1358 aa20.49■□□□□ 0.87
PAF1-201ENST00000221265 NPC1L1Q9UHC9 1359 aa20.49■□□□□ 0.87
PAF1-201ENST00000221265 ADGRB2O60241 1585 aa20.49■□□□□ 0.87
PAF1-201ENST00000221265 NINLQ9Y2I6 1382 aa20.48■□□□□ 0.87
PAF1-201ENST00000221265 HSPA2P54652 639 aa20.48■□□□□ 0.87
PAF1-201ENST00000221265 HNRNPUQ00839 825 aaKnown RBP eCLIP20.48■□□□□ 0.87
PAF1-201ENST00000221265 NLRP13Q86W25 1043 aa20.47■□□□□ 0.87
PAF1-201ENST00000221265 BRD4O60885 1362 aaPredicted RBP20.47■□□□□ 0.87
PAF1-201ENST00000221265 USP32Q8NFA0 1604 aa20.46■□□□□ 0.87
PAF1-201ENST00000221265 PRR36Q9H6K5 1346 aa20.46■□□□□ 0.87
PAF1-201ENST00000221265 NUDT16Q96DE0 195 aaKnown RBP20.46■□□□□ 0.87
PAF1-201ENST00000221265 ATP7BP35670 1465 aa20.44■□□□□ 0.86
PAF1-201ENST00000221265 NUTM2FA1L443 756 aa20.44■□□□□ 0.86
PAF1-201ENST00000221265 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
PAF1-201ENST00000221265 PNISRQ8TF01 805 aaKnown RBP20.44■□□□□ 0.86
PAF1-201ENST00000221265 PPIP5K1Q6PFW1 1433 aa20.44■□□□□ 0.86
PAF1-201ENST00000221265 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
PAF1-201ENST00000221265 TERF2IPQ9NYB0 399 aa20.43■□□□□ 0.86
PAF1-201ENST00000221265 RGPD8O14715 1765 aaPredicted RBP20.42■□□□□ 0.86
PAF1-201ENST00000221265 NEFLP07196 543 aa20.42■□□□□ 0.86
PAF1-201ENST00000221265 LMTK3Q96Q04 1460 aa20.41■□□□□ 0.86
PAF1-201ENST00000221265 CGNL1Q0VF96 1302 aa20.41■□□□□ 0.86
PAF1-201ENST00000221265 CCDC61Q9Y6R9 512 aa20.41■□□□□ 0.86
PAF1-201ENST00000221265 NALCNQ8IZF0 1738 aa20.4■□□□□ 0.86
PAF1-201ENST00000221265 TOPAZ1Q8N9V7 1692 aa20.4■□□□□ 0.86
PAF1-201ENST00000221265 HDGFL2Q7Z4V5 671 aaPredicted RBP20.39■□□□□ 0.86
PAF1-201ENST00000221265 CDC42BPGQ6DT37 1551 aa20.38■□□□□ 0.85
PAF1-201ENST00000221265 TNNT2P45379 298 aaPredicted RBP20.38■□□□□ 0.85
PAF1-201ENST00000221265 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
PAF1-201ENST00000221265 ITSN1Q15811 1721 aa20.37■□□□□ 0.85
PAF1-201ENST00000221265 AKAP12Q02952 1782 aa20.37■□□□□ 0.85
PAF1-201ENST00000221265 MORC1Q86VD1 984 aa20.37■□□□□ 0.85
PAF1-201ENST00000221265 KIF20BQ96Q89 1820 aa20.36■□□□□ 0.85
PAF1-201ENST00000221265 GGNBP2Q9H3C7 697 aa20.36■□□□□ 0.85
PAF1-201ENST00000221265 NWD1Q149M9 1564 aa20.35■□□□□ 0.85
PAF1-201ENST00000221265 STRCQ7RTU9 1775 aa20.35■□□□□ 0.85
PAF1-201ENST00000221265 MON2Q7Z3U7 1717 aa20.35■□□□□ 0.85
PAF1-201ENST00000221265 FYB1O15117 783 aa20.35■□□□□ 0.85
PAF1-201ENST00000221265 NKTRP30414 1462 aaKnown RBP20.35■□□□□ 0.85
PAF1-201ENST00000221265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.85
PAF1-201ENST00000221265 FMN2Q9NZ56 1722 aa20.34■□□□□ 0.85
PAF1-201ENST00000221265 ANKRD26Q9UPS8 1709 aa20.34■□□□□ 0.85
PAF1-201ENST00000221265 STRCP1A6NGW2 1772 aa20.34■□□□□ 0.85
PAF1-201ENST00000221265 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.85
PAF1-201ENST00000221265 NSD2O96028 1365 aa20.33■□□□□ 0.84
PAF1-201ENST00000221265 TSHZ2Q9NRE2 1034 aa20.32■□□□□ 0.84
PAF1-201ENST00000221265 ACEP12821 1306 aa20.3■□□□□ 0.84
PAF1-201ENST00000221265 EDC4Q6P2E9 1401 aaKnown RBP20.3■□□□□ 0.84
PAF1-201ENST00000221265 PLEKHG3A1L390 1219 aa20.3■□□□□ 0.84
PAF1-201ENST00000221265 PMFBP1Q8TBY8 1022 aa20.3■□□□□ 0.84
PAF1-201ENST00000221265 ADGRL3Q9HAR2 1447 aa20.29■□□□□ 0.84
PAF1-201ENST00000221265 NME9Q86XW9 330 aa20.28■□□□□ 0.84
PAF1-201ENST00000221265 ZRANB1Q9UGI0 708 aa20.27■□□□□ 0.84
PAF1-201ENST00000221265 NRKQ7Z2Y5 1582 aa20.27■□□□□ 0.84
PAF1-201ENST00000221265 PROSER2Q86WR7 435 aaPredicted RBP20.26■□□□□ 0.83
PAF1-201ENST00000221265 ZBED9Q6R2W3 1325 aa20.26■□□□□ 0.83
PAF1-201ENST00000221265 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
PAF1-201ENST00000221265 ANKARQ7Z5J8 1434 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms