RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 IQGAP3Q86VI3 1631 aa14.17□□□□□ -0.14
NEFM-201ENST00000221166 ABCC2Q92887 1545 aa14.17□□□□□ -0.14
NEFM-201ENST00000221166 MINK1Q8N4C8 1332 aaPredicted RBP14.17□□□□□ -0.14
NEFM-201ENST00000221166 NPC1L1Q9UHC9 1359 aa14.16□□□□□ -0.14
NEFM-201ENST00000221166 UGGT1Q9NYU2 1555 aa14.15□□□□□ -0.14
NEFM-201ENST00000221166 ELL2O00472 640 aaPredicted RBP14.15□□□□□ -0.14
NEFM-201ENST00000221166 RIPK4P57078 832 aa14.15□□□□□ -0.14
NEFM-201ENST00000221166 MVPQ14764 893 aaKnown RBP14.15□□□□□ -0.14
NEFM-201ENST00000221166 POLR3AO14802 1390 aaPredicted RBP14.14□□□□□ -0.15
NEFM-201ENST00000221166 MYO5CQ9NQX4 1742 aa14.13□□□□□ -0.15
NEFM-201ENST00000221166 FANCAO15360 1455 aa14.13□□□□□ -0.15
NEFM-201ENST00000221166 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.13□□□□□ -0.15
NEFM-201ENST00000221166 TBC1D2Q9BYX2 928 aa14.13□□□□□ -0.15
NEFM-201ENST00000221166 C22orf23Q9BZE7 217 aa14.13□□□□□ -0.15
NEFM-201ENST00000221166 HSCBQ8IWL3 235 aa14.13□□□□□ -0.15
NEFM-201ENST00000221166 ERVK-7P63135 1459 aa14.13□□□□□ -0.15
NEFM-201ENST00000221166 VGFO15240 615 aaPredicted RBP14.13□□□□□ -0.15
NEFM-201ENST00000221166 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
NEFM-201ENST00000221166 NOB1Q9ULX3 412 aaKnown RBP14.13□□□□□ -0.15
NEFM-201ENST00000221166 LNPKQ9C0E8 428 aa14.12□□□□□ -0.15
NEFM-201ENST00000221166 C14orf93Q9H972 538 aaKnown RBP14.12□□□□□ -0.15
NEFM-201ENST00000221166 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
NEFM-201ENST00000221166 USP19O94966 1318 aa14.12□□□□□ -0.15
NEFM-201ENST00000221166 SSH1Q8WYL5 1049 aa14.12□□□□□ -0.15
NEFM-201ENST00000221166 NINLQ9Y2I6 1382 aa14.11□□□□□ -0.15
NEFM-201ENST00000221166 PLXNC1O60486 1568 aa14.11□□□□□ -0.15
NEFM-201ENST00000221166 SYNMO15061 1565 aa14.11□□□□□ -0.15
NEFM-201ENST00000221166 L1TD1Q5T7N2 865 aaKnown RBP14.1□□□□□ -0.15
NEFM-201ENST00000221166 DDX19BQ9UMR2 479 aa14.1□□□□□ -0.15
NEFM-201ENST00000221166 PTPRTO14522 1441 aa14.1□□□□□ -0.15
NEFM-201ENST00000221166 MADDQ8WXG6 1647 aa14.1□□□□□ -0.15
NEFM-201ENST00000221166 IPO8O15397 1037 aaKnown RBP14.1□□□□□ -0.15
NEFM-201ENST00000221166 HSP90AB1P08238 724 aaKnown RBP14.1□□□□□ -0.15
NEFM-201ENST00000221166 TMPOP42166 694 aaKnown RBP14.1□□□□□ -0.15
NEFM-201ENST00000221166 TBC1D32Q96NH3 1257 aa14.1□□□□□ -0.15
NEFM-201ENST00000221166 LAMC1P11047 1609 aa14.09□□□□□ -0.15
NEFM-201ENST00000221166 TRIM27P14373 513 aa14.09□□□□□ -0.15
NEFM-201ENST00000221166 TERF2IPQ9NYB0 399 aa14.09□□□□□ -0.15
NEFM-201ENST00000221166 RTEL1-TNFRSF6BF6WH68 1400 aa14.09□□□□□ -0.15
NEFM-201ENST00000221166 TRPM2O94759 1503 aa14.09□□□□□ -0.15
NEFM-201ENST00000221166 FBLN1P23142 703 aa14.09□□□□□ -0.15
NEFM-201ENST00000221166 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
NEFM-201ENST00000221166 GOLGA6L3A6NEY3 463 aa14.08□□□□□ -0.15
NEFM-201ENST00000221166 DIAPH1O60610 1272 aaKnown RBP14.08□□□□□ -0.15
NEFM-201ENST00000221166 RAPGEF3O95398 923 aa14.08□□□□□ -0.15
NEFM-201ENST00000221166 AAMPQ13685 434 aa14.08□□□□□ -0.15
NEFM-201ENST00000221166 CLTCL1P53675 1640 aa14.08□□□□□ -0.16
NEFM-201ENST00000221166 ATF7IPQ6VMQ6 1270 aa14.08□□□□□ -0.16
NEFM-201ENST00000221166 HDGFL2Q7Z4V5 671 aaPredicted RBP14.08□□□□□ -0.16
NEFM-201ENST00000221166 ABCC1P33527 1531 aa14.08□□□□□ -0.16
NEFM-201ENST00000221166 HMOX1P09601 288 aa14.08□□□□□ -0.16
NEFM-201ENST00000221166 ANKRD45Q5TZF3 282 aa14.08□□□□□ -0.16
NEFM-201ENST00000221166 C1orf115Q9H7X2 142 aa14.07□□□□□ -0.16
NEFM-201ENST00000221166 PRAM1Q96QH2 718 aa14.06□□□□□ -0.16
NEFM-201ENST00000221166 CFAP65Q6ZU64 1925 aaKnown RBP14.06□□□□□ -0.16
NEFM-201ENST00000221166 KDM5AP29375 1690 aaKnown RBP14.06□□□□□ -0.16
NEFM-201ENST00000221166 THUMPD2Q9BTF0 503 aaKnown RBP14.06□□□□□ -0.16
NEFM-201ENST00000221166 CHMP5Q9NZZ3 219 aa14.06□□□□□ -0.16
NEFM-201ENST00000221166 CHD1O14646 1710 aa14.05□□□□□ -0.16
NEFM-201ENST00000221166 APBB1O00213 710 aa14.05□□□□□ -0.16
NEFM-201ENST00000221166 MCM4P33991 863 aa14.04□□□□□ -0.16
NEFM-201ENST00000221166 PNNQ9H307 717 aaKnown RBP14.04□□□□□ -0.16
NEFM-201ENST00000221166 ATP7AQ04656 1500 aa14.04□□□□□ -0.16
NEFM-201ENST00000221166 PRKAR2BP31323 418 aa14.03□□□□□ -0.16
NEFM-201ENST00000221166 CABP1Q9NZU7 370 aa14.03□□□□□ -0.16
NEFM-201ENST00000221166 IDI1Q13907 227 aa14.03□□□□□ -0.16
NEFM-201ENST00000221166 CCDC27Q2M243 656 aa14.03□□□□□ -0.16
NEFM-201ENST00000221166 TRAK2O60296 914 aa14.02□□□□□ -0.16
NEFM-201ENST00000221166 NAP1L5Q96NT1 182 aaPredicted RBP14.02□□□□□ -0.17
NEFM-201ENST00000221166 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
NEFM-201ENST00000221166 ZFYVE16Q7Z3T8 1539 aa14.01□□□□□ -0.17
NEFM-201ENST00000221166 ZCCHC11Q5TAX3 1644 aaKnown RBP14.01□□□□□ -0.17
NEFM-201ENST00000221166 MLECQ14165 292 aa14.01□□□□□ -0.17
NEFM-201ENST00000221166 IQGAP1P46940 1657 aa14.01□□□□□ -0.17
NEFM-201ENST00000221166 RPGRIP1LQ68CZ1 1315 aa14.01□□□□□ -0.17
NEFM-201ENST00000221166 FYB1O15117 783 aa14□□□□□ -0.17
NEFM-201ENST00000221166 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
NEFM-201ENST00000221166 KIF16BQ96L93 1317 aa14□□□□□ -0.17
NEFM-201ENST00000221166 SOX12O15370 315 aa14□□□□□ -0.17
NEFM-201ENST00000221166 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
NEFM-201ENST00000221166 CDK19Q9BWU1 502 aa14□□□□□ -0.17
NEFM-201ENST00000221166 NCLP19338 710 aaKnown RBP13.99□□□□□ -0.17
NEFM-201ENST00000221166 CLASP1Q7Z460 1538 aa13.99□□□□□ -0.17
NEFM-201ENST00000221166 ANKRD36BQ8N2N9 1353 aa13.99□□□□□ -0.17
NEFM-201ENST00000221166 CT47B1P0C2W7 299 aaPredicted RBP13.99□□□□□ -0.17
NEFM-201ENST00000221166 SPHKAPQ2M3C7 1700 aa13.98□□□□□ -0.17
NEFM-201ENST00000221166 CHD1LQ86WJ1 897 aa13.98□□□□□ -0.17
NEFM-201ENST00000221166 PANK2Q9BZ23 570 aa13.98□□□□□ -0.17
NEFM-201ENST00000221166 ANTXR1Q9H6X2 564 aa13.98□□□□□ -0.17
NEFM-201ENST00000221166 ASXL2Q76L83 1435 aa13.97□□□□□ -0.17
NEFM-201ENST00000221166 TRIM44Q96DX7 344 aaPredicted RBP13.97□□□□□ -0.17
NEFM-201ENST00000221166 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
NEFM-201ENST00000221166 A0A1W2PP64 1363 aa13.97□□□□□ -0.17
NEFM-201ENST00000221166 SBNO2Q9Y2G9 1366 aa13.97□□□□□ -0.17
NEFM-201ENST00000221166 HDAC1Q13547 482 aaPredicted RBP13.97□□□□□ -0.17
NEFM-201ENST00000221166 MAP3K4Q9Y6R4 1608 aa13.96□□□□□ -0.17
NEFM-201ENST00000221166 WAPLQ7Z5K2 1190 aa13.96□□□□□ -0.18
NEFM-201ENST00000221166 MYOM2P54296 1465 aa13.96□□□□□ -0.18
NEFM-201ENST00000221166 XRCC6P12956 609 aaKnown RBP eCLIP13.95□□□□□ -0.18
NEFM-201ENST00000221166 ABCA6Q8N139 1617 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms