RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 FIBPO43427 364 aa13.24□□□□□ -0.29
USP31-201ENST00000219689 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
USP31-201ENST00000219689 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
USP31-201ENST00000219689 TMCO3Q6UWJ1 677 aa13.23□□□□□ -0.29
USP31-201ENST00000219689 EIF3AQ14152 1382 aaKnown RBP13.23□□□□□ -0.29
USP31-201ENST00000219689 ERLIN1O75477 346 aa13.23□□□□□ -0.29
USP31-201ENST00000219689 RNF187Q5TA31 235 aaPredicted RBP13.23□□□□□ -0.29
USP31-201ENST00000219689 CCDC192P0DO97 292 aa13.23□□□□□ -0.29
USP31-201ENST00000219689 SRRTQ9BXP5 876 aaKnown RBP13.23□□□□□ -0.29
USP31-201ENST00000219689 ENOX2Q16206 610 aaKnown RBP13.22□□□□□ -0.29
USP31-201ENST00000219689 STK31Q9BXU1 1019 aa13.22□□□□□ -0.29
USP31-201ENST00000219689 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
USP31-201ENST00000219689 CFDP1Q9UEE9 299 aaPredicted RBP13.22□□□□□ -0.29
USP31-201ENST00000219689 LMOD2Q6P5Q4 547 aa13.22□□□□□ -0.29
USP31-201ENST00000219689 LMOD3Q0VAK6 560 aa13.22□□□□□ -0.29
USP31-201ENST00000219689 MYO6Q9UM54 1294 aa13.22□□□□□ -0.29
USP31-201ENST00000219689 TDO2P48775 406 aa13.21□□□□□ -0.29
USP31-201ENST00000219689 KANK4Q5T7N3 995 aaPredicted RBP13.21□□□□□ -0.29
USP31-201ENST00000219689 SPAG9O60271 1321 aaKnown RBP13.21□□□□□ -0.29
USP31-201ENST00000219689 SHTN1A0MZ66 631 aa13.21□□□□□ -0.29
USP31-201ENST00000219689 SDF4Q9BRK5 362 aa13.21□□□□□ -0.29
USP31-201ENST00000219689 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.21□□□□□ -0.29
USP31-201ENST00000219689 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.21□□□□□ -0.29
USP31-201ENST00000219689 CCDC94Q9BW85 323 aaPredicted RBP13.21□□□□□ -0.3
USP31-201ENST00000219689 TNMDQ9H2S6 317 aa13.21□□□□□ -0.3
USP31-201ENST00000219689 DNAAF4Q8WXU2 420 aa13.2□□□□□ -0.3
USP31-201ENST00000219689 LMAN1P49257 510 aa13.2□□□□□ -0.3
USP31-201ENST00000219689 TTC31Q49AM3 519 aaPredicted RBP13.2□□□□□ -0.3
USP31-201ENST00000219689 HSP90AB2PQ58FF8 381 aa13.2□□□□□ -0.3
USP31-201ENST00000219689 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
USP31-201ENST00000219689 UBXN4Q92575 508 aa13.2□□□□□ -0.3
USP31-201ENST00000219689 IGSF3O75054 1194 aa13.2□□□□□ -0.3
USP31-201ENST00000219689 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
USP31-201ENST00000219689 KINO60870 393 aaKnown RBP13.2□□□□□ -0.3
USP31-201ENST00000219689 TRIM29Q14134 588 aa13.19□□□□□ -0.3
USP31-201ENST00000219689 MARCH6O60337 910 aa13.19□□□□□ -0.3
USP31-201ENST00000219689 AKAP17AQ02040 695 aaKnown RBP13.19□□□□□ -0.3
USP31-201ENST00000219689 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
USP31-201ENST00000219689 SMAP1Q8IYB5 467 aaPredicted RBP13.18□□□□□ -0.3
USP31-201ENST00000219689 MPHOSPH9Q99550 1183 aa13.18□□□□□ -0.3
USP31-201ENST00000219689 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
USP31-201ENST00000219689 FAM107BQ9H098 131 aa13.18□□□□□ -0.3
USP31-201ENST00000219689 C16orf45Q96MC5 204 aaPredicted RBP13.18□□□□□ -0.3
USP31-201ENST00000219689 NF2P35240 595 aa13.18□□□□□ -0.3
USP31-201ENST00000219689 CEBPZQ03701 1054 aaKnown RBP13.18□□□□□ -0.3
USP31-201ENST00000219689 SMARCE1Q969G3 411 aa13.18□□□□□ -0.3
USP31-201ENST00000219689 ZKSCAN1P17029 563 aaPredicted RBP13.18□□□□□ -0.3
USP31-201ENST00000219689 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
USP31-201ENST00000219689 TAX1BP1Q86VP1 789 aa13.17□□□□□ -0.3
USP31-201ENST00000219689 CDC45O75419 566 aa13.17□□□□□ -0.3
USP31-201ENST00000219689 GBP2P32456 591 aaPredicted RBP13.17□□□□□ -0.3
USP31-201ENST00000219689 CHMP4CQ96CF2 233 aa13.17□□□□□ -0.3
USP31-201ENST00000219689 GOLGA6L10A0A0M3HER8 536 aa13.17□□□□□ -0.3
USP31-201ENST00000219689 K7ELQ4 463 aaPredicted RBP13.17□□□□□ -0.3
USP31-201ENST00000219689 NEXNQ0ZGT2 675 aa13.17□□□□□ -0.3
USP31-201ENST00000219689 RUFY2Q8WXA3 655 aa13.17□□□□□ -0.3
USP31-201ENST00000219689 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
USP31-201ENST00000219689 CLCN1P35523 988 aa13.16□□□□□ -0.3
USP31-201ENST00000219689 KRT222Q8N1A0 295 aa13.16□□□□□ -0.3
USP31-201ENST00000219689 L3MBTL2Q969R5 705 aa13.16□□□□□ -0.3
USP31-201ENST00000219689 CASQ1P31415 396 aa13.16□□□□□ -0.3
USP31-201ENST00000219689 SERPINC1P01008 464 aa13.16□□□□□ -0.3
USP31-201ENST00000219689 LRRFIP2Q9Y608 721 aaKnown RBP13.16□□□□□ -0.3
USP31-201ENST00000219689 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
USP31-201ENST00000219689 PKD2Q13563 968 aa13.16□□□□□ -0.3
USP31-201ENST00000219689 KIF18AQ8NI77 898 aa13.16□□□□□ -0.3
USP31-201ENST00000219689 PANK3Q9H999 370 aa13.16□□□□□ -0.3
USP31-201ENST00000219689 ERLIN2O94905 339 aa13.15□□□□□ -0.3
USP31-201ENST00000219689 CCAR1Q8IX12 1150 aaKnown RBP13.15□□□□□ -0.3
USP31-201ENST00000219689 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
USP31-201ENST00000219689 SOGA1O94964 1423 aa13.15□□□□□ -0.3
USP31-201ENST00000219689 CLGNO14967 610 aa13.15□□□□□ -0.3
USP31-201ENST00000219689 EPS15P42566 896 aa13.15□□□□□ -0.3
USP31-201ENST00000219689 CCDC91Q7Z6B0 441 aa13.15□□□□□ -0.31
USP31-201ENST00000219689 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
USP31-201ENST00000219689 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
USP31-201ENST00000219689 RABEP1Q15276 862 aa13.14□□□□□ -0.31
USP31-201ENST00000219689 CPLX1O14810 134 aa13.14□□□□□ -0.31
USP31-201ENST00000219689 CFAP65Q6ZU64 1925 aaKnown RBP13.14□□□□□ -0.31
USP31-201ENST00000219689 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.31
USP31-201ENST00000219689 CWC22Q9HCG8 908 aaKnown RBP13.14□□□□□ -0.31
USP31-201ENST00000219689 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
USP31-201ENST00000219689 CFAP45Q9UL16 551 aa13.13□□□□□ -0.31
USP31-201ENST00000219689 C10orf67Q8IYJ2 551 aa13.13□□□□□ -0.31
USP31-201ENST00000219689 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
USP31-201ENST00000219689 SEPT7Q16181 437 aaKnown RBP13.13□□□□□ -0.31
USP31-201ENST00000219689 CRACR2AQ9BSW2 395 aa13.13□□□□□ -0.31
USP31-201ENST00000219689 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
USP31-201ENST00000219689 NEK4P51957 841 aa13.13□□□□□ -0.31
USP31-201ENST00000219689 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
USP31-201ENST00000219689 ELL2O00472 640 aaPredicted RBP13.13□□□□□ -0.31
USP31-201ENST00000219689 FAM177BA6PVY3 158 aa13.12□□□□□ -0.31
USP31-201ENST00000219689 KDM4AO75164 1064 aa13.12□□□□□ -0.31
USP31-201ENST00000219689 TRMT1Q9NXH9 659 aaKnown RBP13.12□□□□□ -0.31
USP31-201ENST00000219689 ZNF330Q9Y3S2 320 aaPredicted RBP13.12□□□□□ -0.31
USP31-201ENST00000219689 KANK1Q14678 1352 aa13.12□□□□□ -0.31
USP31-201ENST00000219689 APAF1O14727 1248 aa13.12□□□□□ -0.31
USP31-201ENST00000219689 USP47Q96K76 1375 aa13.12□□□□□ -0.31
USP31-201ENST00000219689 CCDC181Q5TID7 509 aa13.12□□□□□ -0.31
USP31-201ENST00000219689 FILIP1Q7Z7B0 1213 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms