RNA–Protein interactions for RNA: ENST00000219439.8

HSDL1-201, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSDL1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-201ENST00000219439 NGEFQ8N5V2 710 aa19.31■□□□□ 0.68
HSDL1-201ENST00000219439 CGNL1Q0VF96 1302 aa19.3■□□□□ 0.68
HSDL1-201ENST00000219439 POLR3AO14802 1390 aaPredicted RBP19.3■□□□□ 0.68
HSDL1-201ENST00000219439 MROH1Q8NDA8 1641 aa19.3■□□□□ 0.68
HSDL1-201ENST00000219439 NFKBIBQ15653 356 aa19.3■□□□□ 0.68
HSDL1-201ENST00000219439 NUTM2DQ5VT03 806 aaPredicted RBP19.3■□□□□ 0.68
HSDL1-201ENST00000219439 EFCAB6Q5THR3 1501 aa19.3■□□□□ 0.68
HSDL1-201ENST00000219439 CLUAP1Q96AJ1 413 aa19.29■□□□□ 0.68
HSDL1-201ENST00000219439 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
HSDL1-201ENST00000219439 CFAP65Q6ZU64 1925 aaKnown RBP19.28■□□□□ 0.68
HSDL1-201ENST00000219439 PDE3AQ14432 1141 aa19.28■□□□□ 0.68
HSDL1-201ENST00000219439 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
HSDL1-201ENST00000219439 GLI2P10070 1586 aa19.28■□□□□ 0.68
HSDL1-201ENST00000219439 MROH2AA6NES4 1674 aa19.28■□□□□ 0.68
HSDL1-201ENST00000219439 MLH3Q9UHC1 1453 aa19.28■□□□□ 0.68
HSDL1-201ENST00000219439 RUNDC1Q96C34 613 aa19.28■□□□□ 0.68
HSDL1-201ENST00000219439 BCL2L13Q9BXK5 485 aa19.28■□□□□ 0.68
HSDL1-201ENST00000219439 PPRC1Q5VV67 1664 aaKnown RBP19.26■□□□□ 0.67
HSDL1-201ENST00000219439 MTHFSP49914 203 aa19.26■□□□□ 0.67
HSDL1-201ENST00000219439 HECW2Q9P2P5 1572 aa19.26■□□□□ 0.67
HSDL1-201ENST00000219439 SBNO2Q9Y2G9 1366 aa19.26■□□□□ 0.67
HSDL1-201ENST00000219439 NEURL4Q96JN8 1562 aa19.26■□□□□ 0.67
HSDL1-201ENST00000219439 TRHP20396 242 aaPredicted RBP19.26■□□□□ 0.67
HSDL1-201ENST00000219439 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
HSDL1-201ENST00000219439 C14orf93Q9H972 538 aaKnown RBP19.25■□□□□ 0.67
HSDL1-201ENST00000219439 IL27Q8NEV9 243 aa19.24■□□□□ 0.67
HSDL1-201ENST00000219439 CFAP53Q96M91 514 aa19.24■□□□□ 0.67
HSDL1-201ENST00000219439 SAFB2Q14151 953 aaKnown RBP eCLIP19.23■□□□□ 0.67
HSDL1-201ENST00000219439 NRXN1Q9ULB1 1477 aa19.22■□□□□ 0.67
HSDL1-201ENST00000219439 RARSP54136 660 aaKnown RBP19.22■□□□□ 0.67
HSDL1-201ENST00000219439 RTN4Q9NQC3 1192 aaKnown RBP19.22■□□□□ 0.67
HSDL1-201ENST00000219439 TNNQ9UQP3 1299 aa19.22■□□□□ 0.67
HSDL1-201ENST00000219439 IFT172Q9UG01 1749 aa19.21■□□□□ 0.67
HSDL1-201ENST00000219439 NINLQ9Y2I6 1382 aa19.21■□□□□ 0.67
HSDL1-201ENST00000219439 NPATQ14207 1427 aa19.21■□□□□ 0.67
HSDL1-201ENST00000219439 U2AF1L5P0DN76 240 aaPredicted RBP19.21■□□□□ 0.67
HSDL1-201ENST00000219439 U2AF1Q01081 240 aaKnown RBP eCLIP19.21■□□□□ 0.677e-10■□□□□ 10.6
HSDL1-201ENST00000219439 MLECQ14165 292 aa19.21■□□□□ 0.67
HSDL1-201ENST00000219439 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
HSDL1-201ENST00000219439 GSE1Q14687 1217 aa19.2■□□□□ 0.66
HSDL1-201ENST00000219439 MAPK8IP3Q9UPT6 1336 aa19.2■□□□□ 0.66
HSDL1-201ENST00000219439 MYO3AQ8NEV4 1616 aa19.19■□□□□ 0.66
HSDL1-201ENST00000219439 RLBP1P12271 317 aa19.18■□□□□ 0.66
HSDL1-201ENST00000219439 SEC24BO95487 1268 aa19.18■□□□□ 0.66
HSDL1-201ENST00000219439 CABP2Q9NPB3 220 aa19.18■□□□□ 0.66
HSDL1-201ENST00000219439 QRICH2Q9H0J4 1663 aa19.17■□□□□ 0.66
HSDL1-201ENST00000219439 EVC2Q86UK5 1308 aa19.17■□□□□ 0.66
HSDL1-201ENST00000219439 WDR63Q8IWG1 891 aa19.17■□□□□ 0.66
HSDL1-201ENST00000219439 RICTORQ6R327 1708 aa19.17■□□□□ 0.66
HSDL1-201ENST00000219439 SETBP1Q9Y6X0 1596 aa19.17■□□□□ 0.66
HSDL1-201ENST00000219439 FRAT2O75474 233 aaPredicted RBP19.17■□□□□ 0.66
HSDL1-201ENST00000219439 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
HSDL1-201ENST00000219439 PCDHB15Q9Y5E8 787 aa19.16■□□□□ 0.66
HSDL1-201ENST00000219439 FRMPD1Q5SYB0 1578 aa19.16■□□□□ 0.66
HSDL1-201ENST00000219439 LMTK2Q8IWU2 1503 aa19.16■□□□□ 0.66
HSDL1-201ENST00000219439 STK26Q9P289 416 aa19.15■□□□□ 0.66
HSDL1-201ENST00000219439 SHPRHQ149N8 1683 aa19.15■□□□□ 0.66
HSDL1-201ENST00000219439 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.66
HSDL1-201ENST00000219439 U2SURPO15042 1029 aaKnown RBP19.14■□□□□ 0.65
HSDL1-201ENST00000219439 DIP2CQ9Y2E4 1556 aa19.14■□□□□ 0.65
HSDL1-201ENST00000219439 RPGRIP1LQ68CZ1 1315 aa19.14■□□□□ 0.65
HSDL1-201ENST00000219439 ADGRB1O14514 1584 aa19.13■□□□□ 0.65
HSDL1-201ENST00000219439 USP19O94966 1318 aa19.13■□□□□ 0.65
HSDL1-201ENST00000219439 KIF13AQ9H1H9 1805 aa19.13■□□□□ 0.65
HSDL1-201ENST00000219439 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
HSDL1-201ENST00000219439 IQSEC2Q5JU85 1478 aa19.12■□□□□ 0.65
HSDL1-201ENST00000219439 VGFO15240 615 aaPredicted RBP19.12■□□□□ 0.65
HSDL1-201ENST00000219439 SRPK2P78362 688 aaKnown RBP19.12■□□□□ 0.65
HSDL1-201ENST00000219439 FTSJ3Q8IY81 847 aaKnown RBP19.12■□□□□ 0.65
HSDL1-201ENST00000219439 TSR2Q969E8 191 aaKnown RBP19.12■□□□□ 0.65
HSDL1-201ENST00000219439 PDZRN3Q9UPQ7 1066 aa19.12■□□□□ 0.65
HSDL1-201ENST00000219439 PPLO60437 1756 aa19.11■□□□□ 0.65
HSDL1-201ENST00000219439 BECN1Q14457 450 aa19.1■□□□□ 0.65
HSDL1-201ENST00000219439 SLKQ9H2G2 1235 aaPredicted RBP19.1■□□□□ 0.65
HSDL1-201ENST00000219439 UPF2Q9HAU5 1272 aaKnown RBP19.1■□□□□ 0.65
HSDL1-201ENST00000219439 ANKRD36BQ8N2N9 1353 aa19.1■□□□□ 0.65
HSDL1-201ENST00000219439 CCDC27Q2M243 656 aa19.1■□□□□ 0.65
HSDL1-201ENST00000219439 GGNBP2Q9H3C7 697 aa19.1■□□□□ 0.65
HSDL1-201ENST00000219439 RWDD1Q9H446 243 aaPredicted RBP19.1■□□□□ 0.65
HSDL1-201ENST00000219439 BRPF3Q9ULD4 1205 aa19.1■□□□□ 0.65
HSDL1-201ENST00000219439 ZC3H13Q5T200 1668 aaKnown RBP19.09■□□□□ 0.65
HSDL1-201ENST00000219439 ZKSCAN2Q63HK3 967 aa19.08■□□□□ 0.64
HSDL1-201ENST00000219439 AAMPQ13685 434 aa19.07■□□□□ 0.64
HSDL1-201ENST00000219439 SMC4Q9NTJ3 1288 aa19.07■□□□□ 0.64
HSDL1-201ENST00000219439 MVPQ14764 893 aaKnown RBP19.07■□□□□ 0.64
HSDL1-201ENST00000219439 DZIP1LQ8IYY4 767 aaKnown RBP19.06■□□□□ 0.64
HSDL1-201ENST00000219439 ABCC3O15438 1527 aa19.06■□□□□ 0.64
HSDL1-201ENST00000219439 TULP4Q9NRJ4 1543 aa19.05■□□□□ 0.64
HSDL1-201ENST00000219439 EXOSC9Q06265 439 aaKnown RBP19.05■□□□□ 0.64
HSDL1-201ENST00000219439 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
HSDL1-201ENST00000219439 NSD2O96028 1365 aa19.05■□□□□ 0.64
HSDL1-201ENST00000219439 MINK1Q8N4C8 1332 aaPredicted RBP19.05■□□□□ 0.64
HSDL1-201ENST00000219439 IDI1Q13907 227 aa19.04■□□□□ 0.64
HSDL1-201ENST00000219439 A0A1W2PP64 1363 aa19.03■□□□□ 0.64
HSDL1-201ENST00000219439 ITPRIPQ8IWB1 547 aa19.03■□□□□ 0.64
HSDL1-201ENST00000219439 VIRMAQ69YN4 1812 aaKnown RBP19.03■□□□□ 0.64
HSDL1-201ENST00000219439 FBXO31Q5XUX0 539 aaPredicted RBP19.03■□□□□ 0.64
HSDL1-201ENST00000219439 POGKQ9P215 609 aa19.03■□□□□ 0.64
HSDL1-201ENST00000219439 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
HSDL1-201ENST00000219439 PUS7Q96PZ0 661 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms