RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 NINLQ9Y2I6 1382 aa12.29□□□□□ -0.44
TUBB1-201ENST00000217133 MCM4P33991 863 aa12.29□□□□□ -0.44
TUBB1-201ENST00000217133 ANTXR1Q9H6X2 564 aa12.29□□□□□ -0.44
TUBB1-201ENST00000217133 RWDD1Q9H446 243 aaPredicted RBP12.29□□□□□ -0.44
TUBB1-201ENST00000217133 EIF2AK4Q9P2K8 1649 aaKnown RBP12.28□□□□□ -0.44
TUBB1-201ENST00000217133 MAST1Q9Y2H9 1570 aa12.28□□□□□ -0.44
TUBB1-201ENST00000217133 BCL2L13Q9BXK5 485 aa12.28□□□□□ -0.44
TUBB1-201ENST00000217133 RRP7AQ9Y3A4 280 aaKnown RBP12.28□□□□□ -0.44
TUBB1-201ENST00000217133 ASXL1Q8IXJ9 1541 aa12.28□□□□□ -0.44
TUBB1-201ENST00000217133 INO80Q9ULG1 1556 aaPredicted RBP12.28□□□□□ -0.44
TUBB1-201ENST00000217133 WWC1Q8IX03 1113 aa12.27□□□□□ -0.44
TUBB1-201ENST00000217133 PANK2Q9BZ23 570 aa12.27□□□□□ -0.44
TUBB1-201ENST00000217133 FRMPD1Q5SYB0 1578 aa12.27□□□□□ -0.45
TUBB1-201ENST00000217133 HSP90AA1P07900 732 aaKnown RBP12.27□□□□□ -0.45
TUBB1-201ENST00000217133 CHMP5Q9NZZ3 219 aa12.27□□□□□ -0.45
TUBB1-201ENST00000217133 CHGAP10645 457 aaKnown RBP12.27□□□□□ -0.45
TUBB1-201ENST00000217133 MFAP1P55081 439 aaKnown RBP12.27□□□□□ -0.45
TUBB1-201ENST00000217133 TRAK2O60296 914 aa12.26□□□□□ -0.45
TUBB1-201ENST00000217133 FBXO31Q5XUX0 539 aaPredicted RBP12.26□□□□□ -0.45
TUBB1-201ENST00000217133 PCDHB15Q9Y5E8 787 aa12.26□□□□□ -0.45
TUBB1-201ENST00000217133 CFAP74Q9C0B2 1584 aa12.26□□□□□ -0.45
TUBB1-201ENST00000217133 HECW2Q9P2P5 1572 aa12.26□□□□□ -0.45
TUBB1-201ENST00000217133 ABCA6Q8N139 1617 aa12.26□□□□□ -0.45
TUBB1-201ENST00000217133 LAMC1P11047 1609 aa12.26□□□□□ -0.45
TUBB1-201ENST00000217133 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
TUBB1-201ENST00000217133 TNNT2P45379 298 aaPredicted RBP12.25□□□□□ -0.45
TUBB1-201ENST00000217133 AAMPQ13685 434 aa12.25□□□□□ -0.45
TUBB1-201ENST00000217133 HSP90AA2PQ14568 343 aaPredicted RBP12.25□□□□□ -0.45
TUBB1-201ENST00000217133 MYH16Q9H6N6 1097 aa12.25□□□□□ -0.45
TUBB1-201ENST00000217133 KANK1Q14678 1352 aa12.24□□□□□ -0.45
TUBB1-201ENST00000217133 RICTORQ6R327 1708 aa12.24□□□□□ -0.45
TUBB1-201ENST00000217133 CLCN1P35523 988 aa12.24□□□□□ -0.45
TUBB1-201ENST00000217133 MRE11P49959 708 aa12.24□□□□□ -0.45
TUBB1-201ENST00000217133 RARSP54136 660 aaKnown RBP12.24□□□□□ -0.45
TUBB1-201ENST00000217133 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
TUBB1-201ENST00000217133 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
TUBB1-201ENST00000217133 CEBPAP49715 358 aaPredicted RBP12.24□□□□□ -0.45
TUBB1-201ENST00000217133 FTSJ3Q8IY81 847 aaKnown RBP12.24□□□□□ -0.45
TUBB1-201ENST00000217133 TRIM44Q96DX7 344 aaPredicted RBP12.24□□□□□ -0.45
TUBB1-201ENST00000217133 TNNQ9UQP3 1299 aa12.23□□□□□ -0.45
TUBB1-201ENST00000217133 NPC1L1Q9UHC9 1359 aa12.23□□□□□ -0.45
TUBB1-201ENST00000217133 FSD2A1L4K1 749 aa12.23□□□□□ -0.45
TUBB1-201ENST00000217133 NUTM2DQ5VT03 806 aaPredicted RBP12.23□□□□□ -0.45
TUBB1-201ENST00000217133 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
TUBB1-201ENST00000217133 DIP2CQ9Y2E4 1556 aa12.23□□□□□ -0.45
TUBB1-201ENST00000217133 RLBP1P12271 317 aa12.23□□□□□ -0.45
TUBB1-201ENST00000217133 SCAF11Q99590 1463 aaKnown RBP12.22□□□□□ -0.45
TUBB1-201ENST00000217133 ATP10AO60312 1499 aa12.22□□□□□ -0.45
TUBB1-201ENST00000217133 DDX11L8A8MPP1 907 aa12.22□□□□□ -0.45
TUBB1-201ENST00000217133 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
TUBB1-201ENST00000217133 ESF1Q9H501 851 aaKnown RBP12.22□□□□□ -0.45
TUBB1-201ENST00000217133 TCP11L2Q8N4U5 519 aa12.21□□□□□ -0.45
TUBB1-201ENST00000217133 PKNOX2Q96KN3 472 aa12.21□□□□□ -0.45
TUBB1-201ENST00000217133 NLRP1Q9C000 1473 aa12.21□□□□□ -0.46
TUBB1-201ENST00000217133 SLC24A1O60721 1099 aa12.21□□□□□ -0.46
TUBB1-201ENST00000217133 RUNDC1Q96C34 613 aa12.21□□□□□ -0.46
TUBB1-201ENST00000217133 GRPEL1Q9HAV7 217 aa12.2□□□□□ -0.46
TUBB1-201ENST00000217133 SYNMO15061 1565 aa12.19□□□□□ -0.46
TUBB1-201ENST00000217133 ESPNB1AK53 854 aa12.19□□□□□ -0.46
TUBB1-201ENST00000217133 STAC3Q96MF2 364 aa12.19□□□□□ -0.46
TUBB1-201ENST00000217133 RRP9O43818 475 aaKnown RBP12.18□□□□□ -0.46
TUBB1-201ENST00000217133 ZKSCAN2Q63HK3 967 aa12.18□□□□□ -0.46
TUBB1-201ENST00000217133 CARD14Q9BXL6 1004 aa12.18□□□□□ -0.46
TUBB1-201ENST00000217133 CFAP65Q6ZU64 1925 aaKnown RBP12.18□□□□□ -0.46
TUBB1-201ENST00000217133 MVPQ14764 893 aaKnown RBP12.17□□□□□ -0.46
TUBB1-201ENST00000217133 DZIP1LQ8IYY4 767 aaKnown RBP12.17□□□□□ -0.46
TUBB1-201ENST00000217133 ZMYM3Q14202 1370 aa12.17□□□□□ -0.46
TUBB1-201ENST00000217133 HSP90AB1P08238 724 aaKnown RBP12.17□□□□□ -0.46
TUBB1-201ENST00000217133 WDR63Q8IWG1 891 aa12.17□□□□□ -0.46
TUBB1-201ENST00000217133 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
TUBB1-201ENST00000217133 UGGT1Q9NYU2 1555 aa12.17□□□□□ -0.46
TUBB1-201ENST00000217133 CFAP70Q5T0N1 1121 aa12.17□□□□□ -0.46
TUBB1-201ENST00000217133 NPATQ14207 1427 aa12.17□□□□□ -0.46
TUBB1-201ENST00000217133 UNC13BO14795 1591 aa12.16□□□□□ -0.46
TUBB1-201ENST00000217133 SIGLEC1Q9BZZ2 1709 aa12.16□□□□□ -0.46
TUBB1-201ENST00000217133 GBP4Q96PP9 640 aa12.16□□□□□ -0.46
TUBB1-201ENST00000217133 ISY1Q9ULR0 285 aaKnown RBP12.16□□□□□ -0.46
TUBB1-201ENST00000217133 POLR3AO14802 1390 aaPredicted RBP12.16□□□□□ -0.46
TUBB1-201ENST00000217133 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
TUBB1-201ENST00000217133 SMC4Q9NTJ3 1288 aa12.16□□□□□ -0.46
TUBB1-201ENST00000217133 VIRMAQ69YN4 1812 aaKnown RBP12.16□□□□□ -0.46
TUBB1-201ENST00000217133 MROH1Q8NDA8 1641 aa12.15□□□□□ -0.46
TUBB1-201ENST00000217133 IDI1Q13907 227 aa12.15□□□□□ -0.46
TUBB1-201ENST00000217133 ANP32BQ92688 251 aaKnown RBP12.14□□□□□ -0.47
TUBB1-201ENST00000217133 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
TUBB1-201ENST00000217133 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
TUBB1-201ENST00000217133 IQGAP3Q86VI3 1631 aa12.14□□□□□ -0.47
TUBB1-201ENST00000217133 RNF17Q9BXT8 1623 aaKnown RBP12.13□□□□□ -0.47
TUBB1-201ENST00000217133 ZMYND15Q9H091 742 aa12.13□□□□□ -0.47
TUBB1-201ENST00000217133 MTHFSP49914 203 aa12.13□□□□□ -0.47
TUBB1-201ENST00000217133 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
TUBB1-201ENST00000217133 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
TUBB1-201ENST00000217133 DDX19BQ9UMR2 479 aa12.12□□□□□ -0.47
TUBB1-201ENST00000217133 TNPO1Q92973 898 aaKnown RBP12.12□□□□□ -0.47
TUBB1-201ENST00000217133 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
TUBB1-201ENST00000217133 ABCC3O15438 1527 aa12.11□□□□□ -0.47
TUBB1-201ENST00000217133 MADDQ8WXG6 1647 aa12.11□□□□□ -0.47
TUBB1-201ENST00000217133 GOLGA6L22H0YM25 854 aa12.11□□□□□ -0.47
TUBB1-201ENST00000217133 TSR2Q969E8 191 aaKnown RBP12.11□□□□□ -0.47
TUBB1-201ENST00000217133 NSD3Q9BZ95 1437 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms