RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 PPP2R1AP30153 589 aa11.8□□□□□ -0.52
MTHFD1-201ENST00000216605 HDGFP51858 240 aaKnown RBP11.79□□□□□ -0.52
MTHFD1-201ENST00000216605 MORC1Q86VD1 984 aa11.79□□□□□ -0.52
MTHFD1-201ENST00000216605 ERVK-7P63135 1459 aa11.79□□□□□ -0.52
MTHFD1-201ENST00000216605 KIF13AQ9H1H9 1805 aa11.79□□□□□ -0.52
MTHFD1-201ENST00000216605 KIAA1210Q9ULL0 1709 aa11.78□□□□□ -0.52
MTHFD1-201ENST00000216605 CLTCQ00610 1675 aaKnown RBP11.78□□□□□ -0.52
MTHFD1-201ENST00000216605 PPLO60437 1756 aa11.77□□□□□ -0.52
MTHFD1-201ENST00000216605 NRXN1Q9ULB1 1477 aa11.77□□□□□ -0.52
MTHFD1-201ENST00000216605 CARD14Q9BXL6 1004 aa11.77□□□□□ -0.53
MTHFD1-201ENST00000216605 PREX1Q8TCU6 1659 aa11.77□□□□□ -0.53
MTHFD1-201ENST00000216605 AGLP35573 1532 aa11.76□□□□□ -0.53
MTHFD1-201ENST00000216605 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.76□□□□□ -0.53
MTHFD1-201ENST00000216605 ADAMTS8Q9UP79 889 aa11.76□□□□□ -0.53
MTHFD1-201ENST00000216605 NUDCQ9Y266 331 aa11.76□□□□□ -0.53
MTHFD1-201ENST00000216605 NEXMIFQ5QGS0 1516 aa11.76□□□□□ -0.53
MTHFD1-201ENST00000216605 IFT172Q9UG01 1749 aa11.76□□□□□ -0.53
MTHFD1-201ENST00000216605 KDM5AP29375 1690 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-201ENST00000216605 PIK3C2BO00750 1634 aa11.75□□□□□ -0.53
MTHFD1-201ENST00000216605 WAPLQ7Z5K2 1190 aa11.75□□□□□ -0.53
MTHFD1-201ENST00000216605 RIMS2Q9UQ26 1411 aa11.75□□□□□ -0.53
MTHFD1-201ENST00000216605 GLIPR1L2Q4G1C9 344 aa11.74□□□□□ -0.53
MTHFD1-201ENST00000216605 ARHGEF40Q8TER5 1519 aa11.74□□□□□ -0.53
MTHFD1-201ENST00000216605 NSD3Q9BZ95 1437 aa11.74□□□□□ -0.53
MTHFD1-201ENST00000216605 TNRQ92752 1358 aa11.74□□□□□ -0.53
MTHFD1-201ENST00000216605 ASXL1Q8IXJ9 1541 aa11.74□□□□□ -0.53
MTHFD1-201ENST00000216605 CCDC146Q8IYE0 955 aa11.73□□□□□ -0.53
MTHFD1-201ENST00000216605 SBNO2Q9Y2G9 1366 aa11.73□□□□□ -0.53
MTHFD1-201ENST00000216605 SETBP1Q9Y6X0 1596 aa11.73□□□□□ -0.53
MTHFD1-201ENST00000216605 CGNL1Q0VF96 1302 aa11.73□□□□□ -0.53
MTHFD1-201ENST00000216605 TXNDC2Q86VQ3 553 aa11.73□□□□□ -0.53
MTHFD1-201ENST00000216605 MYO5BQ9ULV0 1848 aa11.73□□□□□ -0.53
MTHFD1-201ENST00000216605 CDK19Q9BWU1 502 aa11.72□□□□□ -0.53
MTHFD1-201ENST00000216605 PPP4R2Q9NY27 417 aa11.72□□□□□ -0.53
MTHFD1-201ENST00000216605 YTHDC2Q9H6S0 1430 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-201ENST00000216605 LRPPRCP42704 1394 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-201ENST00000216605 ADGRB1O14514 1584 aa11.72□□□□□ -0.53
MTHFD1-201ENST00000216605 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.53
MTHFD1-201ENST00000216605 EID1Q9Y6B2 187 aa11.71□□□□□ -0.53
MTHFD1-201ENST00000216605 TMEM131LA2VDJ0 1609 aa11.71□□□□□ -0.53
MTHFD1-201ENST00000216605 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-201ENST00000216605 REREQ9P2R6 1566 aa11.71□□□□□ -0.54
MTHFD1-201ENST00000216605 ZFYVE9O95405 1425 aa11.71□□□□□ -0.54
MTHFD1-201ENST00000216605 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
MTHFD1-201ENST00000216605 QRICH2Q9H0J4 1663 aa11.7□□□□□ -0.54
MTHFD1-201ENST00000216605 CDCA7LQ96GN5 454 aa11.7□□□□□ -0.54
MTHFD1-201ENST00000216605 CFAP53Q96M91 514 aa11.7□□□□□ -0.54
MTHFD1-201ENST00000216605 NEUROD2Q15784 382 aa11.69□□□□□ -0.54
MTHFD1-201ENST00000216605 SLC26A8Q96RN1 970 aa11.69□□□□□ -0.54
MTHFD1-201ENST00000216605 GGNBP2Q9H3C7 697 aa11.69□□□□□ -0.54
MTHFD1-201ENST00000216605 CABP1Q9NZU7 370 aa11.69□□□□□ -0.54
MTHFD1-201ENST00000216605 NUTM2FA1L443 756 aa11.69□□□□□ -0.54
MTHFD1-201ENST00000216605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.69□□□□□ -0.54
MTHFD1-201ENST00000216605 FGD1P98174 961 aa11.69□□□□□ -0.54
MTHFD1-201ENST00000216605 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
MTHFD1-201ENST00000216605 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-201ENST00000216605 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-201ENST00000216605 MTHFSP49914 203 aa11.68□□□□□ -0.54
MTHFD1-201ENST00000216605 PDE3BQ13370 1112 aa11.67□□□□□ -0.54
MTHFD1-201ENST00000216605 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
MTHFD1-201ENST00000216605 ALKQ9UM73 1620 aa11.67□□□□□ -0.54
MTHFD1-201ENST00000216605 APAF1O14727 1248 aa11.66□□□□□ -0.54
MTHFD1-201ENST00000216605 NPC1L1Q9UHC9 1359 aa11.66□□□□□ -0.54
MTHFD1-201ENST00000216605 SPATA31D1Q6ZQQ2 1576 aa11.66□□□□□ -0.54
MTHFD1-201ENST00000216605 B4GALNT3Q6L9W6 998 aa11.66□□□□□ -0.54
MTHFD1-201ENST00000216605 RCAN3Q9UKA8 241 aa11.66□□□□□ -0.54
MTHFD1-201ENST00000216605 ANKRD36BQ8N2N9 1353 aa11.66□□□□□ -0.54
MTHFD1-201ENST00000216605 U2SURPO15042 1029 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-201ENST00000216605 PUS7Q96PZ0 661 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-201ENST00000216605 PLEKHH1Q9ULM0 1364 aa11.65□□□□□ -0.54
MTHFD1-201ENST00000216605 MYOM1P52179 1685 aa11.65□□□□□ -0.55
MTHFD1-201ENST00000216605 METP08581 1390 aa11.64□□□□□ -0.55
MTHFD1-201ENST00000216605 TMEM2Q9UHN6 1383 aa11.64□□□□□ -0.55
MTHFD1-201ENST00000216605 U2AF1L5P0DN76 240 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-201ENST00000216605 LTKP29376 864 aa11.64□□□□□ -0.55
MTHFD1-201ENST00000216605 U2AF1Q01081 240 aaKnown RBP eCLIP11.64□□□□□ -0.55
MTHFD1-201ENST00000216605 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-201ENST00000216605 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
MTHFD1-201ENST00000216605 THEMISQ8N1K5 641 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-201ENST00000216605 A0A1W2PP64 1363 aa11.63□□□□□ -0.55
MTHFD1-201ENST00000216605 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
MTHFD1-201ENST00000216605 ZMYND15Q9H091 742 aa11.63□□□□□ -0.55
MTHFD1-201ENST00000216605 TULP4Q9NRJ4 1543 aa11.63□□□□□ -0.55
MTHFD1-201ENST00000216605 ARHGEF28Q8N1W1 1705 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-201ENST00000216605 RRP7AQ9Y3A4 280 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-201ENST00000216605 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
MTHFD1-201ENST00000216605 WASLO00401 505 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-201ENST00000216605 PTPRMP28827 1452 aa11.62□□□□□ -0.55
MTHFD1-201ENST00000216605 A0A0U1RQG5 324 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-201ENST00000216605 NUDT16Q96DE0 195 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-201ENST00000216605 ABCC11Q96J66 1382 aa11.61□□□□□ -0.55
MTHFD1-201ENST00000216605 NCKAP5LQ9HCH0 1330 aa11.61□□□□□ -0.55
MTHFD1-201ENST00000216605 FYB1O15117 783 aa11.6□□□□□ -0.55
MTHFD1-201ENST00000216605 NINLQ9Y2I6 1382 aa11.6□□□□□ -0.55
MTHFD1-201ENST00000216605 PLIN1O60240 522 aa11.6□□□□□ -0.55
MTHFD1-201ENST00000216605 BLMP54132 1417 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-201ENST00000216605 RRP1P56182 461 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-201ENST00000216605 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
MTHFD1-201ENST00000216605 NOP58Q9Y2X3 529 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-201ENST00000216605 FBLN1P23142 703 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms