RNA–Protein interactions for RNA: ENST00000216122.8

MCM5-201, Transcript of minichromosome maintenance complex component 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM5, Length 3,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM5-201ENST00000216122 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.29
MCM5-201ENST00000216122 PLCH2O75038 1416 aa13.21□□□□□ -0.3
MCM5-201ENST00000216122 SHROOM2Q13796 1616 aa13.21□□□□□ -0.3
MCM5-201ENST00000216122 ADGRL1O94910 1474 aa13.2□□□□□ -0.3
MCM5-201ENST00000216122 PER1O15534 1290 aaPredicted RBP13.2□□□□□ -0.3
MCM5-201ENST00000216122 IGSF3O75054 1194 aa13.2□□□□□ -0.3
MCM5-201ENST00000216122 NCLP19338 710 aaKnown RBP13.2□□□□□ -0.3
MCM5-201ENST00000216122 ZNF830Q96NB3 372 aaPredicted RBP13.2□□□□□ -0.3
MCM5-201ENST00000216122 PDZRN3Q9UPQ7 1066 aa13.2□□□□□ -0.3
MCM5-201ENST00000216122 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
MCM5-201ENST00000216122 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
MCM5-201ENST00000216122 IPO4Q8TEX9 1081 aaKnown RBP13.19□□□□□ -0.3
MCM5-201ENST00000216122 GBP4Q96PP9 640 aa13.19□□□□□ -0.3
MCM5-201ENST00000216122 NOL7Q9UMY1 257 aaKnown RBP13.19□□□□□ -0.3
MCM5-201ENST00000216122 SLFN5Q08AF3 891 aa13.19□□□□□ -0.3
MCM5-201ENST00000216122 RTEL1-TNFRSF6BF6WH68 1400 aa13.18□□□□□ -0.3
MCM5-201ENST00000216122 TRAPPC8Q9Y2L5 1435 aa13.18□□□□□ -0.3
MCM5-201ENST00000216122 ZNF500O60304 480 aaPredicted RBP13.18□□□□□ -0.3
MCM5-201ENST00000216122 ZCCHC11Q5TAX3 1644 aaKnown RBP13.18□□□□□ -0.3
MCM5-201ENST00000216122 TAF7LQ5H9L4 462 aa13.18□□□□□ -0.3
MCM5-201ENST00000216122 FAM177BA6PVY3 158 aa13.18□□□□□ -0.3
MCM5-201ENST00000216122 WDR43Q15061 677 aaKnown RBP eCLIP13.18□□□□□ -0.3
MCM5-201ENST00000216122 SASS6Q6UVJ0 657 aa13.18□□□□□ -0.3
MCM5-201ENST00000216122 UHRF1BP1LA0JNW5 1464 aa13.18□□□□□ -0.3
MCM5-201ENST00000216122 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
MCM5-201ENST00000216122 SYCP2Q9BX26 1530 aa13.17□□□□□ -0.3
MCM5-201ENST00000216122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.17□□□□□ -0.32e-6■■■□□ 17.5
MCM5-201ENST00000216122 SKOR2Q2VWA4 1001 aaPredicted RBP13.17□□□□□ -0.3
MCM5-201ENST00000216122 ZNF521Q96K83 1311 aa13.17□□□□□ -0.3
MCM5-201ENST00000216122 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
MCM5-201ENST00000216122 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
MCM5-201ENST00000216122 CGNL1Q0VF96 1302 aa13.16□□□□□ -0.3
MCM5-201ENST00000216122 TCOF1Q13428 1488 aaKnown RBP13.16□□□□□ -0.3
MCM5-201ENST00000216122 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
MCM5-201ENST00000216122 RIMBP3CA6NJZ7 1639 aa13.16□□□□□ -0.3
MCM5-201ENST00000216122 RIMBP3BA6NNM3 1639 aa13.16□□□□□ -0.3
MCM5-201ENST00000216122 RIMBP3Q9UFD9 1639 aa13.16□□□□□ -0.3
MCM5-201ENST00000216122 DDIT3P35638 169 aa13.16□□□□□ -0.3
MCM5-201ENST00000216122 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
MCM5-201ENST00000216122 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
MCM5-201ENST00000216122 KANK1Q14678 1352 aa13.15□□□□□ -0.3
MCM5-201ENST00000216122 RALGAPBQ86X10 1494 aa13.15□□□□□ -0.3
MCM5-201ENST00000216122 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
MCM5-201ENST00000216122 ABCC10Q5T3U5 1492 aa13.15□□□□□ -0.3
MCM5-201ENST00000216122 KIF20AO95235 890 aa13.15□□□□□ -0.3
MCM5-201ENST00000216122 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
MCM5-201ENST00000216122 SPDYE4A6NLX3 237 aa13.14□□□□□ -0.31
MCM5-201ENST00000216122 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
MCM5-201ENST00000216122 GTPBP4Q9BZE4 634 aaKnown RBP13.14□□□□□ -0.31
MCM5-201ENST00000216122 CGNQ9P2M7 1197 aaKnown RBP13.14□□□□□ -0.31
MCM5-201ENST00000216122 TNNQ9UQP3 1299 aa13.14□□□□□ -0.31
MCM5-201ENST00000216122 ZKSCAN5Q9Y2L8 839 aa13.14□□□□□ -0.31
MCM5-201ENST00000216122 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
MCM5-201ENST00000216122 TTC37Q6PGP7 1564 aa13.14□□□□□ -0.31
MCM5-201ENST00000216122 SSFA2P28290 1259 aa13.14□□□□□ -0.31
MCM5-201ENST00000216122 ZNF710Q8N1W2 664 aa13.14□□□□□ -0.31
MCM5-201ENST00000216122 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
MCM5-201ENST00000216122 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
MCM5-201ENST00000216122 PZPP20742 1482 aa13.13□□□□□ -0.31
MCM5-201ENST00000216122 LETM1O95202 739 aaPredicted RBP13.13□□□□□ -0.31
MCM5-201ENST00000216122 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
MCM5-201ENST00000216122 DNTTIP2Q5QJE6 756 aaKnown RBP13.12□□□□□ -0.31
MCM5-201ENST00000216122 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
MCM5-201ENST00000216122 NCOA3Q9Y6Q9 1424 aa13.12□□□□□ -0.31
MCM5-201ENST00000216122 INSRP06213 1382 aa13.11□□□□□ -0.31
MCM5-201ENST00000216122 APAF1O14727 1248 aa13.11□□□□□ -0.31
MCM5-201ENST00000216122 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
MCM5-201ENST00000216122 MPNDQ8N594 471 aa13.1□□□□□ -0.31
MCM5-201ENST00000216122 PDE3AQ14432 1141 aa13.1□□□□□ -0.31
MCM5-201ENST00000216122 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
MCM5-201ENST00000216122 RLBP1P12271 317 aa13.09□□□□□ -0.31
MCM5-201ENST00000216122 SMC5Q8IY18 1101 aa13.09□□□□□ -0.31
MCM5-201ENST00000216122 PDLIM2Q96JY6 352 aa13.09□□□□□ -0.31
MCM5-201ENST00000216122 CD2BP2O95400 341 aaKnown RBP13.09□□□□□ -0.31
MCM5-201ENST00000216122 KLHL40Q2TBA0 621 aa13.09□□□□□ -0.31
MCM5-201ENST00000216122 TRMT2AQ8IZ69 625 aaKnown RBP13.09□□□□□ -0.31
MCM5-201ENST00000216122 BCL2L13Q9BXK5 485 aa13.09□□□□□ -0.31
MCM5-201ENST00000216122 PRIM1P49642 420 aaKnown RBP13.09□□□□□ -0.31
MCM5-201ENST00000216122 ZSCAN23Q3MJ62 389 aa13.09□□□□□ -0.31
MCM5-201ENST00000216122 AK9Q5TCS8 1911 aa13.09□□□□□ -0.31
MCM5-201ENST00000216122 KIAA1107Q9UPP5 1409 aa13.08□□□□□ -0.31
MCM5-201ENST00000216122 ROCK1Q13464 1354 aa13.08□□□□□ -0.31
MCM5-201ENST00000216122 GOLGA6L22H0YM25 854 aa13.08□□□□□ -0.32
MCM5-201ENST00000216122 CDK11BP21127 795 aaKnown RBP13.08□□□□□ -0.32
MCM5-201ENST00000216122 MYRIPQ8NFW9 859 aa13.08□□□□□ -0.32
MCM5-201ENST00000216122 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
MCM5-201ENST00000216122 UHRF1BP1Q6BDS2 1440 aa13.08□□□□□ -0.32
MCM5-201ENST00000216122 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
MCM5-201ENST00000216122 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
MCM5-201ENST00000216122 PPP2R1AP30153 589 aa13.07□□□□□ -0.32
MCM5-201ENST00000216122 MCTP1Q6DN14 999 aa13.07□□□□□ -0.32
MCM5-201ENST00000216122 RBM27Q9P2N5 1060 aaKnown RBP13.07□□□□□ -0.32
MCM5-201ENST00000216122 BAG4O95429 457 aaKnown RBP13.06□□□□□ -0.32
MCM5-201ENST00000216122 PTMSP20962 102 aa13.06□□□□□ -0.32
MCM5-201ENST00000216122 ZNF445P59923 1031 aa13.05□□□□□ -0.32
MCM5-201ENST00000216122 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
MCM5-201ENST00000216122 TSPOAP1O95153 1857 aa13.05□□□□□ -0.32
MCM5-201ENST00000216122 E9PSI1 815 aa13.05□□□□□ -0.32
MCM5-201ENST00000216122 PTMAP06454 111 aaKnown RBP13.05□□□□□ -0.32
MCM5-201ENST00000216122 ZNF771Q7L3S4 317 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms