RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 SYNMO15061 1565 aa14.39□□□□□ -0.11
APOBEC3D-201ENST00000216099 PUS7Q96PZ0 661 aaKnown RBP14.39□□□□□ -0.11
APOBEC3D-201ENST00000216099 MRS2Q9HD23 443 aa14.39□□□□□ -0.11
APOBEC3D-201ENST00000216099 KDM5AP29375 1690 aaKnown RBP14.38□□□□□ -0.11
APOBEC3D-201ENST00000216099 PREX1Q8TCU6 1659 aa14.38□□□□□ -0.11
APOBEC3D-201ENST00000216099 CCDC184Q52MB2 194 aa14.38□□□□□ -0.11
APOBEC3D-201ENST00000216099 DISP3Q9P2K9 1392 aa14.38□□□□□ -0.11
APOBEC3D-201ENST00000216099 RAPGEF3O95398 923 aa14.38□□□□□ -0.11
APOBEC3D-201ENST00000216099 POLR3GLQ9BT43 218 aa14.38□□□□□ -0.11
APOBEC3D-201ENST00000216099 MYOM1P52179 1685 aa14.38□□□□□ -0.11
APOBEC3D-201ENST00000216099 EIF3AQ14152 1382 aaKnown RBP14.37□□□□□ -0.11
APOBEC3D-201ENST00000216099 YEATS2Q9ULM3 1422 aa14.37□□□□□ -0.11
APOBEC3D-201ENST00000216099 TMF1P82094 1093 aa14.37□□□□□ -0.11
APOBEC3D-201ENST00000216099 AGLP35573 1532 aa14.36□□□□□ -0.11
APOBEC3D-201ENST00000216099 WASHC2CQ9Y4E1 1318 aa14.36□□□□□ -0.11
APOBEC3D-201ENST00000216099 HNRNPUQ00839 825 aaKnown RBP eCLIP14.36□□□□□ -0.11
APOBEC3D-201ENST00000216099 RALBP1Q15311 655 aa14.35□□□□□ -0.11
APOBEC3D-201ENST00000216099 ANP32EQ9BTT0 268 aa14.35□□□□□ -0.11
APOBEC3D-201ENST00000216099 RNF25Q96BH1 459 aaPredicted RBP14.35□□□□□ -0.11
APOBEC3D-201ENST00000216099 SUPT16HQ9Y5B9 1047 aaKnown RBP14.35□□□□□ -0.11
APOBEC3D-201ENST00000216099 RPGRIP1LQ68CZ1 1315 aa14.34□□□□□ -0.11
APOBEC3D-201ENST00000216099 BRD4O60885 1362 aaPredicted RBP14.34□□□□□ -0.11
APOBEC3D-201ENST00000216099 MYO5BQ9ULV0 1848 aa14.34□□□□□ -0.11
APOBEC3D-201ENST00000216099 GGT6Q6P531 493 aa14.34□□□□□ -0.11
APOBEC3D-201ENST00000216099 PARD3Q8TEW0 1356 aa14.33□□□□□ -0.12
APOBEC3D-201ENST00000216099 PIK3C2GO75747 1445 aa14.32□□□□□ -0.12
APOBEC3D-201ENST00000216099 FAM69CQ0P6D2 419 aa14.32□□□□□ -0.12
APOBEC3D-201ENST00000216099 NEXMIFQ5QGS0 1516 aa14.32□□□□□ -0.12
APOBEC3D-201ENST00000216099 ZBED9Q6R2W3 1325 aa14.32□□□□□ -0.12
APOBEC3D-201ENST00000216099 MYBBP1AQ9BQG0 1328 aaKnown RBP14.32□□□□□ -0.12
APOBEC3D-201ENST00000216099 CDCA8Q53HL2 280 aa14.31□□□□□ -0.12
APOBEC3D-201ENST00000216099 QRICH2Q9H0J4 1663 aa14.31□□□□□ -0.12
APOBEC3D-201ENST00000216099 USP35Q9P2H5 1018 aa14.31□□□□□ -0.12
APOBEC3D-201ENST00000216099 ARHGEF40Q8TER5 1519 aa14.3□□□□□ -0.12
APOBEC3D-201ENST00000216099 PER1O15534 1290 aaPredicted RBP14.3□□□□□ -0.12
APOBEC3D-201ENST00000216099 ADGRF5Q8IZF2 1346 aa14.3□□□□□ -0.12
APOBEC3D-201ENST00000216099 SBNO2Q9Y2G9 1366 aa14.3□□□□□ -0.12
APOBEC3D-201ENST00000216099 HS6ST3Q8IZP7 471 aa14.3□□□□□ -0.12
APOBEC3D-201ENST00000216099 ADGRB1O14514 1584 aa14.29□□□□□ -0.12
APOBEC3D-201ENST00000216099 TMEM131LA2VDJ0 1609 aa14.29□□□□□ -0.12
APOBEC3D-201ENST00000216099 LRPPRCP42704 1394 aaKnown RBP14.29□□□□□ -0.12
APOBEC3D-201ENST00000216099 FAM9BQ8IZU0 186 aa14.29□□□□□ -0.12
APOBEC3D-201ENST00000216099 BRD2P25440 801 aaKnown RBP14.28□□□□□ -0.12
APOBEC3D-201ENST00000216099 MFAP1P55081 439 aaKnown RBP14.28□□□□□ -0.12
APOBEC3D-201ENST00000216099 ZFYVE9O95405 1425 aa14.28□□□□□ -0.12
APOBEC3D-201ENST00000216099 CLTCQ00610 1675 aaKnown RBP14.28□□□□□ -0.12
APOBEC3D-201ENST00000216099 ARHGEF28Q8N1W1 1705 aaKnown RBP14.27□□□□□ -0.12
APOBEC3D-201ENST00000216099 ERVK-7P63135 1459 aa14.26□□□□□ -0.13
APOBEC3D-201ENST00000216099 PNISRQ8TF01 805 aaKnown RBP14.26□□□□□ -0.13
APOBEC3D-201ENST00000216099 INSRP06213 1382 aa14.26□□□□□ -0.13
APOBEC3D-201ENST00000216099 CFAP70Q5T0N1 1121 aa14.25□□□□□ -0.13
APOBEC3D-201ENST00000216099 ZNF692Q9BU19 519 aaPredicted RBP14.25□□□□□ -0.13
APOBEC3D-201ENST00000216099 NEFLP07196 543 aa14.25□□□□□ -0.13
APOBEC3D-201ENST00000216099 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
APOBEC3D-201ENST00000216099 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
APOBEC3D-201ENST00000216099 ASXL1Q8IXJ9 1541 aa14.24□□□□□ -0.13
APOBEC3D-201ENST00000216099 HMGB1P09429 215 aaKnown RBP14.24□□□□□ -0.13
APOBEC3D-201ENST00000216099 NLRP13Q86W25 1043 aa14.24□□□□□ -0.13
APOBEC3D-201ENST00000216099 GZF1Q9H116 711 aaPredicted RBP14.24□□□□□ -0.13
APOBEC3D-201ENST00000216099 C14orf93Q9H972 538 aaKnown RBP14.24□□□□□ -0.13
APOBEC3D-201ENST00000216099 PANK3Q9H999 370 aa14.24□□□□□ -0.13
APOBEC3D-201ENST00000216099 SLC52A1Q9NWF4 448 aa14.24□□□□□ -0.13
APOBEC3D-201ENST00000216099 CLUAP1Q96AJ1 413 aa14.23□□□□□ -0.13
APOBEC3D-201ENST00000216099 NPC1L1Q9UHC9 1359 aa14.23□□□□□ -0.13
APOBEC3D-201ENST00000216099 ANO8Q9HCE9 1232 aaPredicted RBP14.23□□□□□ -0.13
APOBEC3D-201ENST00000216099 SPATA31D1Q6ZQQ2 1576 aa14.23□□□□□ -0.13
APOBEC3D-201ENST00000216099 SMG6Q86US8 1419 aaKnown RBP14.2□□□□□ -0.14
APOBEC3D-201ENST00000216099 TMCO4Q5TGY1 634 aa14.2□□□□□ -0.14
APOBEC3D-201ENST00000216099 USP32Q8NFA0 1604 aa14.2□□□□□ -0.14
APOBEC3D-201ENST00000216099 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
APOBEC3D-201ENST00000216099 FAM177A1Q8N128 213 aaPredicted RBP14.18□□□□□ -0.14
APOBEC3D-201ENST00000216099 CENPJQ9HC77 1338 aaPredicted RBP14.18□□□□□ -0.14
APOBEC3D-201ENST00000216099 IDI1Q13907 227 aa14.17□□□□□ -0.14
APOBEC3D-201ENST00000216099 BLMP54132 1417 aaPredicted RBP14.16□□□□□ -0.14
APOBEC3D-201ENST00000216099 CNGB1Q14028 1251 aaPredicted RBP14.16□□□□□ -0.14
APOBEC3D-201ENST00000216099 ERICH6BQ5W0A0 696 aa14.16□□□□□ -0.14
APOBEC3D-201ENST00000216099 KNSTRNQ9Y448 316 aa14.16□□□□□ -0.14
APOBEC3D-201ENST00000216099 PKNOX2Q96KN3 472 aa14.15□□□□□ -0.14
APOBEC3D-201ENST00000216099 WDR70Q9NW82 654 aa14.15□□□□□ -0.14
APOBEC3D-201ENST00000216099 SETD1AO15047 1707 aaKnown RBP14.15□□□□□ -0.14
APOBEC3D-201ENST00000216099 PDE4CQ08493 712 aa14.15□□□□□ -0.14
APOBEC3D-201ENST00000216099 CADPS2Q86UW7 1296 aa14.14□□□□□ -0.15
APOBEC3D-201ENST00000216099 SEMA3EO15041 775 aa14.14□□□□□ -0.15
APOBEC3D-201ENST00000216099 CC2D1BQ5T0F9 858 aaKnown RBP14.14□□□□□ -0.15
APOBEC3D-201ENST00000216099 IRX6P78412 446 aaPredicted RBP14.13□□□□□ -0.15
APOBEC3D-201ENST00000216099 TULP4Q9NRJ4 1543 aa14.13□□□□□ -0.15
APOBEC3D-201ENST00000216099 ALKQ9UM73 1620 aa14.12□□□□□ -0.15
APOBEC3D-201ENST00000216099 IRF5Q13568 498 aa14.11□□□□□ -0.15
APOBEC3D-201ENST00000216099 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
APOBEC3D-201ENST00000216099 A2ML1A8K2U0 1454 aa14.11□□□□□ -0.15
APOBEC3D-201ENST00000216099 PTPRMP28827 1452 aa14.1□□□□□ -0.15
APOBEC3D-201ENST00000216099 TRAK1Q9UPV9 953 aa14.1□□□□□ -0.15
APOBEC3D-201ENST00000216099 PPP2R1AP30153 589 aa14.09□□□□□ -0.15
APOBEC3D-201ENST00000216099 DLC1Q96QB1 1528 aa14.09□□□□□ -0.15
APOBEC3D-201ENST00000216099 FBXO31Q5XUX0 539 aaPredicted RBP14.08□□□□□ -0.15
APOBEC3D-201ENST00000216099 ANKRD26Q9UPS8 1709 aa14.08□□□□□ -0.16
APOBEC3D-201ENST00000216099 TMEM132EQ6IEE7 984 aa14.08□□□□□ -0.16
APOBEC3D-201ENST00000216099 KNDC1Q76NI1 1749 aa14.08□□□□□ -0.16
APOBEC3D-201ENST00000216099 CWC22Q9HCG8 908 aaKnown RBP14.08□□□□□ -0.16
APOBEC3D-201ENST00000216099 RNF123Q5XPI4 1314 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms