RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 SAFB2Q14151 953 aaKnown RBP eCLIP28.47■■■□□ 2.15
RHBDD3-201ENST00000216085 C19orf44Q9H6X5 657 aa28.45■■■□□ 2.15
RHBDD3-201ENST00000216085 XIRP1Q702N8 1843 aaKnown RBP28.45■■■□□ 2.14
RHBDD3-201ENST00000216085 DCCP43146 1447 aa28.43■■■□□ 2.14
RHBDD3-201ENST00000216085 NALCNQ8IZF0 1738 aa28.43■■■□□ 2.14
RHBDD3-201ENST00000216085 QRICH2Q9H0J4 1663 aa28.42■■■□□ 2.14
RHBDD3-201ENST00000216085 ATF3P18847 181 aa28.41■■■□□ 2.14
RHBDD3-201ENST00000216085 EIF4G2P78344 907 aaKnown RBP eCLIP28.41■■■□□ 2.14
RHBDD3-201ENST00000216085 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.4■■■□□ 2.14
RHBDD3-201ENST00000216085 SLC24A1O60721 1099 aa28.39■■■□□ 2.14
RHBDD3-201ENST00000216085 CADPS2Q86UW7 1296 aa28.39■■■□□ 2.14
RHBDD3-201ENST00000216085 MINK1Q8N4C8 1332 aaPredicted RBP28.39■■■□□ 2.14
RHBDD3-201ENST00000216085 ADGRB2O60241 1585 aa28.39■■■□□ 2.14
RHBDD3-201ENST00000216085 CDC42BPGQ6DT37 1551 aa28.39■■■□□ 2.14
RHBDD3-201ENST00000216085 SBNO2Q9Y2G9 1366 aa28.37■■■□□ 2.13
RHBDD3-201ENST00000216085 ST20-MTHFSA0A0A6YYL1 179 aa28.37■■■□□ 2.13
RHBDD3-201ENST00000216085 HIRIP3Q9BW71 556 aaPredicted RBP28.34■■■□□ 2.13
RHBDD3-201ENST00000216085 TOM1O60784 492 aa28.34■■■□□ 2.13
RHBDD3-201ENST00000216085 EVC2Q86UK5 1308 aa28.31■■■□□ 2.12
RHBDD3-201ENST00000216085 WASLO00401 505 aaPredicted RBP28.31■■■□□ 2.12
RHBDD3-201ENST00000216085 HSPA5P11021 654 aaKnown RBP28.29■■■□□ 2.12
RHBDD3-201ENST00000216085 UBAP1LF5GYI3 381 aa28.29■■■□□ 2.12
RHBDD3-201ENST00000216085 FMN2Q9NZ56 1722 aa28.27■■■□□ 2.12
RHBDD3-201ENST00000216085 TMF1P82094 1093 aa28.26■■■□□ 2.11
RHBDD3-201ENST00000216085 TESK2Q96S53 571 aa28.26■■■□□ 2.11
RHBDD3-201ENST00000216085 SRPK2P78362 688 aaKnown RBP28.25■■■□□ 2.11
RHBDD3-201ENST00000216085 CDK19Q9BWU1 502 aa28.25■■■□□ 2.11
RHBDD3-201ENST00000216085 MST1RQ04912 1400 aa28.25■■■□□ 2.11
RHBDD3-201ENST00000216085 TULP4Q9NRJ4 1543 aa28.24■■■□□ 2.11
RHBDD3-201ENST00000216085 SLAIN2Q9P270 581 aa28.24■■■□□ 2.11
RHBDD3-201ENST00000216085 ANKARQ7Z5J8 1434 aa28.24■■■□□ 2.11
RHBDD3-201ENST00000216085 CDCA8Q53HL2 280 aa28.22■■■□□ 2.11
RHBDD3-201ENST00000216085 C1orf167Q5SNV9 1468 aa28.21■■■□□ 2.11
RHBDD3-201ENST00000216085 NUTM2FA1L443 756 aa28.2■■■□□ 2.11
RHBDD3-201ENST00000216085 SCAF1Q9H7N4 1312 aaKnown RBP28.18■■■□□ 2.1
RHBDD3-201ENST00000216085 ATAD2Q6PL18 1390 aa28.17■■■□□ 2.1
RHBDD3-201ENST00000216085 CABP2Q9NPB3 220 aa28.17■■■□□ 2.1
RHBDD3-201ENST00000216085 ATP7BP35670 1465 aa28.16■■■□□ 2.1
RHBDD3-201ENST00000216085 PIP4K2BP78356 416 aa28.16■■■□□ 2.1
RHBDD3-201ENST00000216085 NUDT16Q96DE0 195 aaKnown RBP28.16■■■□□ 2.1
RHBDD3-201ENST00000216085 PUS7Q96PZ0 661 aaKnown RBP28.16■■■□□ 2.1
RHBDD3-201ENST00000216085 ITSN1Q15811 1721 aa28.15■■■□□ 2.1
RHBDD3-201ENST00000216085 ESCO1Q5FWF5 840 aa28.15■■■□□ 2.1
RHBDD3-201ENST00000216085 CCDC61Q9Y6R9 512 aa28.14■■■□□ 2.09
RHBDD3-201ENST00000216085 DISP3Q9P2K9 1392 aa28.13■■■□□ 2.09
RHBDD3-201ENST00000216085 USP32Q8NFA0 1604 aa28.13■■■□□ 2.09
RHBDD3-201ENST00000216085 PRR36Q9H6K5 1346 aa28.12■■■□□ 2.09
RHBDD3-201ENST00000216085 KIF1AQ12756 1690 aa28.1■■■□□ 2.09
RHBDD3-201ENST00000216085 ROBO1Q9Y6N7 1651 aa28.1■■■□□ 2.09
RHBDD3-201ENST00000216085 BRINP3Q76B58 766 aa28.09■■■□□ 2.09
RHBDD3-201ENST00000216085 ORAI2Q96SN7 254 aa28.09■■■□□ 2.09
RHBDD3-201ENST00000216085 PHF8Q9UPP1 1060 aa28.09■■■□□ 2.09
RHBDD3-201ENST00000216085 TOPAZ1Q8N9V7 1692 aa28.08■■■□□ 2.09
RHBDD3-201ENST00000216085 PPIP5K1Q6PFW1 1433 aa28.08■■■□□ 2.09
RHBDD3-201ENST00000216085 RGPD8O14715 1765 aaPredicted RBP28.08■■■□□ 2.09
RHBDD3-201ENST00000216085 NINLQ9Y2I6 1382 aa28.07■■■□□ 2.08
RHBDD3-201ENST00000216085 FBXO41Q8TF61 875 aa28.06■■■□□ 2.08
RHBDD3-201ENST00000216085 POLR3GLQ9BT43 218 aa28.04■■■□□ 2.08
RHBDD3-201ENST00000216085 TMC1Q8TDI8 760 aa28.04■■■□□ 2.08
RHBDD3-201ENST00000216085 NPHP3Q7Z494 1330 aa28.04■■■□□ 2.08
RHBDD3-201ENST00000216085 NGDNQ8NEJ9 315 aaKnown RBP28.03■■■□□ 2.08
RHBDD3-201ENST00000216085 PMFBP1Q8TBY8 1022 aa28.03■■■□□ 2.08
RHBDD3-201ENST00000216085 PLEKHG3A1L390 1219 aa28.02■■■□□ 2.08
RHBDD3-201ENST00000216085 CABP1Q9NZU7 370 aa28.02■■■□□ 2.08
RHBDD3-201ENST00000216085 FOXO3O43524 673 aa27.99■■■□□ 2.07
RHBDD3-201ENST00000216085 AHDC1Q5TGY3 1603 aaPredicted RBP27.98■■■□□ 2.07
RHBDD3-201ENST00000216085 NHSL1Q5SYE7 1610 aa27.98■■■□□ 2.07
RHBDD3-201ENST00000216085 POLR3AO14802 1390 aaPredicted RBP27.97■■■□□ 2.07
RHBDD3-201ENST00000216085 KIF7Q2M1P5 1343 aa27.97■■■□□ 2.07
RHBDD3-201ENST00000216085 PSME1Q06323 249 aa27.97■■■□□ 2.07
RHBDD3-201ENST00000216085 TERF2IPQ9NYB0 399 aa27.97■■■□□ 2.07
RHBDD3-201ENST00000216085 ACEP12821 1306 aa27.97■■■□□ 2.07
RHBDD3-201ENST00000216085 HDGFL2Q7Z4V5 671 aaPredicted RBP27.96■■■□□ 2.07
RHBDD3-201ENST00000216085 C11orf95C9JLR9 678 aaPredicted RBP27.94■■■□□ 2.06
RHBDD3-201ENST00000216085 ZNF692Q9BU19 519 aaPredicted RBP27.94■■■□□ 2.06
RHBDD3-201ENST00000216085 CCDC7Q96M83 1385 aa27.94■■■□□ 2.06
RHBDD3-201ENST00000216085 SLC12A5Q9H2X9 1139 aa27.94■■■□□ 2.06
RHBDD3-201ENST00000216085 PHLPP1O60346 1717 aa27.93■■■□□ 2.06
RHBDD3-201ENST00000216085 KRT28Q7Z3Y7 464 aa27.91■■■□□ 2.06
RHBDD3-201ENST00000216085 WASHC2AQ641Q2 1341 aa27.9■■■□□ 2.06
RHBDD3-201ENST00000216085 MYOM1P52179 1685 aa27.9■■■□□ 2.06
RHBDD3-201ENST00000216085 BRD4O60885 1362 aaPredicted RBP27.9■■■□□ 2.06
RHBDD3-201ENST00000216085 ANKRD36BQ8N2N9 1353 aa27.9■■■□□ 2.06
RHBDD3-201ENST00000216085 DDX17Q92841 729 aaKnown RBP27.9■■■□□ 2.06
RHBDD3-201ENST00000216085 SOS2Q07890 1332 aaPredicted RBP27.9■■■□□ 2.06
RHBDD3-201ENST00000216085 PXDNQ92626 1479 aa27.89■■■□□ 2.06
RHBDD3-201ENST00000216085 KTN1Q86UP2 1357 aaKnown RBP27.89■■■□□ 2.06
RHBDD3-201ENST00000216085 CPSF1Q10570 1443 aaKnown RBP27.89■■■□□ 2.05
RHBDD3-201ENST00000216085 XPCQ01831 940 aaPredicted RBP27.88■■■□□ 2.05
RHBDD3-201ENST00000216085 A0A1W2PP64 1363 aa27.88■■■□□ 2.05
RHBDD3-201ENST00000216085 USP6P35125 1406 aa27.87■■■□□ 2.05
RHBDD3-201ENST00000216085 AKAP12Q02952 1782 aa27.87■■■□□ 2.05
RHBDD3-201ENST00000216085 LRRC59Q96AG4 307 aaKnown RBP27.86■■■□□ 2.05
RHBDD3-201ENST00000216085 COL16A1Q07092 1604 aaPredicted RBP27.86■■■□□ 2.05
RHBDD3-201ENST00000216085 HSPA1LP34931 641 aa27.86■■■□□ 2.05
RHBDD3-201ENST00000216085 SBNO1A3KN83 1393 aa27.86■■■□□ 2.05
RHBDD3-201ENST00000216085 CD163L1Q9NR16 1453 aa27.85■■■□□ 2.05
RHBDD3-201ENST00000216085 PAK3O75914 559 aaPredicted RBP27.84■■■□□ 2.05
RHBDD3-201ENST00000216085 MON2Q7Z3U7 1717 aa27.84■■■□□ 2.05
RHBDD3-201ENST00000216085 ZNF316A6NFI3 1004 aaPredicted RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms