RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 RIMS1Q86UR5 1692 aaKnown RBP19.78■□□□□ 0.76
CBX6-201ENST00000216083 PLEKHH1Q9ULM0 1364 aa19.78■□□□□ 0.76
CBX6-201ENST00000216083 MYBBP1AQ9BQG0 1328 aaKnown RBP19.77■□□□□ 0.76
CBX6-201ENST00000216083 NRXN3Q9Y4C0 1643 aa19.77■□□□□ 0.76
CBX6-201ENST00000216083 TULP4Q9NRJ4 1543 aa19.76■□□□□ 0.75
CBX6-201ENST00000216083 PARD3Q8TEW0 1356 aa19.76■□□□□ 0.75
CBX6-201ENST00000216083 NLRP1Q9C000 1473 aa19.76■□□□□ 0.75
CBX6-201ENST00000216083 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
CBX6-201ENST00000216083 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
CBX6-201ENST00000216083 AMER1Q5JTC6 1135 aaPredicted RBP19.76■□□□□ 0.75
CBX6-201ENST00000216083 HDGFP51858 240 aaKnown RBP19.75■□□□□ 0.75
CBX6-201ENST00000216083 SETD1AO15047 1707 aaKnown RBP19.73■□□□□ 0.75
CBX6-201ENST00000216083 LRPPRCP42704 1394 aaKnown RBP19.71■□□□□ 0.75
CBX6-201ENST00000216083 PNISRQ8TF01 805 aaKnown RBP19.71■□□□□ 0.75
CBX6-201ENST00000216083 EID1Q9Y6B2 187 aa19.71■□□□□ 0.75
CBX6-201ENST00000216083 NLRP13Q86W25 1043 aa19.7■□□□□ 0.74
CBX6-201ENST00000216083 THEMISQ8N1K5 641 aaPredicted RBP19.7■□□□□ 0.74
CBX6-201ENST00000216083 ADAMTS13Q76LX8 1427 aa19.69■□□□□ 0.74
CBX6-201ENST00000216083 CDK19Q9BWU1 502 aa19.69■□□□□ 0.74
CBX6-201ENST00000216083 ABCC11Q96J66 1382 aa19.67■□□□□ 0.74
CBX6-201ENST00000216083 NSD3Q9BZ95 1437 aa19.67■□□□□ 0.74
CBX6-201ENST00000216083 BRD4O60885 1362 aaPredicted RBP19.66■□□□□ 0.74
CBX6-201ENST00000216083 TNNT2P45379 298 aaPredicted RBP19.66■□□□□ 0.74
CBX6-201ENST00000216083 ADAMTSL3P82987 1691 aa19.66■□□□□ 0.74
CBX6-201ENST00000216083 PLEKHG1Q9ULL1 1385 aa19.65■□□□□ 0.74
CBX6-201ENST00000216083 PPP2R1AP30153 589 aa19.65■□□□□ 0.74
CBX6-201ENST00000216083 ROBO2Q9HCK4 1378 aa19.64■□□□□ 0.73
CBX6-201ENST00000216083 NCKAP5LQ9HCH0 1330 aa19.63■□□□□ 0.73
CBX6-201ENST00000216083 ARHGAP23Q9P227 1491 aa19.63■□□□□ 0.73
CBX6-201ENST00000216083 CEP170BQ9Y4F5 1589 aaPredicted RBP19.63■□□□□ 0.73
CBX6-201ENST00000216083 NUTM2FA1L443 756 aa19.62■□□□□ 0.73
CBX6-201ENST00000216083 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
CBX6-201ENST00000216083 SLIT1O75093 1534 aa19.62■□□□□ 0.73
CBX6-201ENST00000216083 NBR1Q14596 966 aa19.62■□□□□ 0.73
CBX6-201ENST00000216083 SALL2Q9Y467 1007 aaPredicted RBP19.61■□□□□ 0.73
CBX6-201ENST00000216083 ANO8Q9HCE9 1232 aaPredicted RBP19.61■□□□□ 0.73
CBX6-201ENST00000216083 PTPRUQ92729 1446 aa19.61■□□□□ 0.73
CBX6-201ENST00000216083 DEKP35659 375 aaKnown RBP19.6■□□□□ 0.73
CBX6-201ENST00000216083 A0A1W2PP64 1363 aa19.6■□□□□ 0.73
CBX6-201ENST00000216083 DLC1Q96QB1 1528 aa19.6■□□□□ 0.73
CBX6-201ENST00000216083 AMOTL2Q9Y2J4 779 aa19.59■□□□□ 0.73
CBX6-201ENST00000216083 ANKRD36BQ8N2N9 1353 aa19.58■□□□□ 0.73
CBX6-201ENST00000216083 WASLO00401 505 aaPredicted RBP19.58■□□□□ 0.72
CBX6-201ENST00000216083 PUS7Q96PZ0 661 aaKnown RBP19.58■□□□□ 0.72
CBX6-201ENST00000216083 ATAD2Q6PL18 1390 aa19.57■□□□□ 0.72
CBX6-201ENST00000216083 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
CBX6-201ENST00000216083 MED14O60244 1454 aa19.56■□□□□ 0.72
CBX6-201ENST00000216083 NPC1L1Q9UHC9 1359 aa19.56■□□□□ 0.72
CBX6-201ENST00000216083 TECPR2O15040 1411 aa19.55■□□□□ 0.72
CBX6-201ENST00000216083 RBM33Q96EV2 1170 aaKnown RBP19.55■□□□□ 0.72
CBX6-201ENST00000216083 GGNBP2Q9H3C7 697 aa19.55■□□□□ 0.72
CBX6-201ENST00000216083 TBX22Q9Y458 520 aa19.55■□□□□ 0.72
CBX6-201ENST00000216083 CGNL1Q0VF96 1302 aa19.54■□□□□ 0.72
CBX6-201ENST00000216083 ZBED9Q6R2W3 1325 aa19.54■□□□□ 0.72
CBX6-201ENST00000216083 ANKLE2Q86XL3 938 aa19.54■□□□□ 0.72
CBX6-201ENST00000216083 CD163L1Q9NR16 1453 aa19.54■□□□□ 0.72
CBX6-201ENST00000216083 SETD1BQ9UPS6 1966 aaKnown RBP19.53■□□□□ 0.72
CBX6-201ENST00000216083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.53■□□□□ 0.72
CBX6-201ENST00000216083 ADAMTS8Q9UP79 889 aa19.53■□□□□ 0.72
CBX6-201ENST00000216083 FAM135BQ49AJ0 1406 aa19.52■□□□□ 0.72
CBX6-201ENST00000216083 NUDT16Q96DE0 195 aaKnown RBP19.52■□□□□ 0.72
CBX6-201ENST00000216083 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.72
CBX6-201ENST00000216083 CPS1P31327 1500 aa19.52■□□□□ 0.72
CBX6-201ENST00000216083 KCNA6P17658 529 aa19.52■□□□□ 0.71
CBX6-201ENST00000216083 PRR36Q9H6K5 1346 aa19.51■□□□□ 0.71
CBX6-201ENST00000216083 KNDC1Q76NI1 1749 aa19.51■□□□□ 0.71
CBX6-201ENST00000216083 HDGFL2Q7Z4V5 671 aaPredicted RBP19.5■□□□□ 0.71
CBX6-201ENST00000216083 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.5■□□□□ 0.71
CBX6-201ENST00000216083 SIRT1Q96EB6 747 aa19.5■□□□□ 0.71
CBX6-201ENST00000216083 PPIP5K1Q6PFW1 1433 aa19.49■□□□□ 0.71
CBX6-201ENST00000216083 FYB1O15117 783 aa19.48■□□□□ 0.71
CBX6-201ENST00000216083 FBLN1P23142 703 aa19.48■□□□□ 0.71
CBX6-201ENST00000216083 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
CBX6-201ENST00000216083 WDR43Q15061 677 aaKnown RBP eCLIP19.48■□□□□ 0.71
CBX6-201ENST00000216083 NINLQ9Y2I6 1382 aa19.47■□□□□ 0.71
CBX6-201ENST00000216083 MTHFSP49914 203 aa19.46■□□□□ 0.71
CBX6-201ENST00000216083 RTN4Q9NQC3 1192 aaKnown RBP19.46■□□□□ 0.71
CBX6-201ENST00000216083 CCDC61Q9Y6R9 512 aa19.46■□□□□ 0.71
CBX6-201ENST00000216083 CCDC146Q8IYE0 955 aa19.46■□□□□ 0.71
CBX6-201ENST00000216083 ZNF142P52746 1687 aaPredicted RBP19.45■□□□□ 0.7
CBX6-201ENST00000216083 ZRANB1Q9UGI0 708 aa19.44■□□□□ 0.7
CBX6-201ENST00000216083 ATP7BP35670 1465 aa19.43■□□□□ 0.7
CBX6-201ENST00000216083 PMFBP1Q8TBY8 1022 aa19.42■□□□□ 0.7
CBX6-201ENST00000216083 HSPA2P54652 639 aa19.42■□□□□ 0.7
CBX6-201ENST00000216083 NME9Q86XW9 330 aa19.42■□□□□ 0.7
CBX6-201ENST00000216083 USP32Q8NFA0 1604 aa19.41■□□□□ 0.7
CBX6-201ENST00000216083 FANCIQ9NVI1 1328 aa19.41■□□□□ 0.7
CBX6-201ENST00000216083 DIP2AQ14689 1571 aa19.39■□□□□ 0.69
CBX6-201ENST00000216083 PTCH1Q13635 1447 aa19.39■□□□□ 0.69
CBX6-201ENST00000216083 B4GALNT3Q6L9W6 998 aa19.39■□□□□ 0.69
CBX6-201ENST00000216083 NPHP4O75161 1426 aaPredicted RBP19.38■□□□□ 0.69
CBX6-201ENST00000216083 BLMP54132 1417 aaPredicted RBP19.38■□□□□ 0.69
CBX6-201ENST00000216083 CDCA7LQ96GN5 454 aa19.38■□□□□ 0.69
CBX6-201ENST00000216083 ACEP12821 1306 aa19.38■□□□□ 0.69
CBX6-201ENST00000216083 NSD2O96028 1365 aa19.38■□□□□ 0.69
CBX6-201ENST00000216083 CPSF1Q10570 1443 aaKnown RBP19.38■□□□□ 0.69
CBX6-201ENST00000216083 XRN1Q8IZH2 1706 aaKnown RBP19.38■□□□□ 0.69
CBX6-201ENST00000216083 KDM4FA0A1W2PPD8 638 aa19.37■□□□□ 0.69
CBX6-201ENST00000216083 PPM1GO15355 546 aaPredicted RBP19.37■□□□□ 0.69
CBX6-201ENST00000216083 PAK3O75914 559 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms