RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 SAFB2Q14151 953 aaKnown RBP eCLIP23.89■■□□□ 1.414e-6■■□□□ 13.7
SLC22A4-201ENST00000200652 GOLGA2Q08379 1002 aa23.88■■□□□ 1.41
SLC22A4-201ENST00000200652 DUSP27Q5VZP5 1158 aa23.88■■□□□ 1.41
SLC22A4-201ENST00000200652 CABP2Q9NPB3 220 aa23.88■■□□□ 1.41
SLC22A4-201ENST00000200652 PTPRMP28827 1452 aa23.88■■□□□ 1.41
SLC22A4-201ENST00000200652 ANKRD36BQ8N2N9 1353 aa23.88■■□□□ 1.41
SLC22A4-201ENST00000200652 CGNL1Q0VF96 1302 aa23.87■■□□□ 1.41
SLC22A4-201ENST00000200652 APAF1O14727 1248 aa23.87■■□□□ 1.41
SLC22A4-201ENST00000200652 STAG3Q9UJ98 1225 aa23.87■■□□□ 1.41
SLC22A4-201ENST00000200652 SPATA31D1Q6ZQQ2 1576 aa23.86■■□□□ 1.41
SLC22A4-201ENST00000200652 YTHDC2Q9H6S0 1430 aaKnown RBP23.86■■□□□ 1.41
SLC22A4-201ENST00000200652 ALKQ9UM73 1620 aa23.86■■□□□ 1.41
SLC22A4-201ENST00000200652 SHPRHQ149N8 1683 aa23.85■■□□□ 1.41
SLC22A4-201ENST00000200652 PLIN1O60240 522 aa23.84■■□□□ 1.41
SLC22A4-201ENST00000200652 TNNT2P45379 298 aaPredicted RBP23.84■■□□□ 1.41
SLC22A4-201ENST00000200652 ARHGEF40Q8TER5 1519 aa23.84■■□□□ 1.41
SLC22A4-201ENST00000200652 SLFN5Q08AF3 891 aa23.84■■□□□ 1.41
SLC22A4-201ENST00000200652 MLECQ14165 292 aa23.83■■□□□ 1.41
SLC22A4-201ENST00000200652 PRAM1Q96QH2 718 aa23.82■■□□□ 1.4
SLC22A4-201ENST00000200652 A2ML1A8K2U0 1454 aa23.82■■□□□ 1.4
SLC22A4-201ENST00000200652 TRMT2AQ8IZ69 625 aaKnown RBP23.82■■□□□ 1.4
SLC22A4-201ENST00000200652 NSD2O96028 1365 aa23.81■■□□□ 1.4
SLC22A4-201ENST00000200652 NINLQ9Y2I6 1382 aa23.8■■□□□ 1.4
SLC22A4-201ENST00000200652 SRPK2P78362 688 aaKnown RBP23.8■■□□□ 1.4
SLC22A4-201ENST00000200652 NGEFQ8N5V2 710 aa23.8■■□□□ 1.4
SLC22A4-201ENST00000200652 POGKQ9P215 609 aa23.8■■□□□ 1.4
SLC22A4-201ENST00000200652 MINK1Q8N4C8 1332 aaPredicted RBP23.79■■□□□ 1.4
SLC22A4-201ENST00000200652 FANCIQ9NVI1 1328 aa23.79■■□□□ 1.4
SLC22A4-201ENST00000200652 MTHFSP49914 203 aa23.78■■□□□ 1.4
SLC22A4-201ENST00000200652 SPINK5Q9NQ38 1064 aaPredicted RBP23.78■■□□□ 1.4
SLC22A4-201ENST00000200652 A0A1W2PP64 1363 aa23.77■■□□□ 1.4
SLC22A4-201ENST00000200652 RIMS2Q9UQ26 1411 aa23.76■■□□□ 1.39
SLC22A4-201ENST00000200652 ATAD2Q6PL18 1390 aa23.76■■□□□ 1.39
SLC22A4-201ENST00000200652 CRBNQ96SW2 442 aa23.76■■□□□ 1.39
SLC22A4-201ENST00000200652 ABCC11Q96J66 1382 aa23.75■■□□□ 1.39
SLC22A4-201ENST00000200652 SETD1AO15047 1707 aaKnown RBP23.74■■□□□ 1.39
SLC22A4-201ENST00000200652 E9PSI1 815 aa23.73■■□□□ 1.39
SLC22A4-201ENST00000200652 CFAP53Q96M91 514 aa23.73■■□□□ 1.39
SLC22A4-201ENST00000200652 C20orf194Q5TEA3 1177 aa23.72■■□□□ 1.39
SLC22A4-201ENST00000200652 NKTRP30414 1462 aaKnown RBP23.72■■□□□ 1.39
SLC22A4-201ENST00000200652 DMRT2Q9Y5R5 561 aa23.72■■□□□ 1.39
SLC22A4-201ENST00000200652 CD163L1Q9NR16 1453 aa23.72■■□□□ 1.39
SLC22A4-201ENST00000200652 ZMYM3Q14202 1370 aa23.71■■□□□ 1.39
SLC22A4-201ENST00000200652 RUNDC1Q96C34 613 aa23.71■■□□□ 1.39
SLC22A4-201ENST00000200652 DLC1Q96QB1 1528 aa23.71■■□□□ 1.39
SLC22A4-201ENST00000200652 CDK19Q9BWU1 502 aa23.71■■□□□ 1.39
SLC22A4-201ENST00000200652 WWC1Q8IX03 1113 aa23.7■■□□□ 1.38
SLC22A4-201ENST00000200652 TERF2IPQ9NYB0 399 aa23.7■■□□□ 1.38
SLC22A4-201ENST00000200652 ESF1Q9H501 851 aaKnown RBP23.69■■□□□ 1.38
SLC22A4-201ENST00000200652 MSH5O43196 834 aa23.68■■□□□ 1.38
SLC22A4-201ENST00000200652 IQSEC2Q5JU85 1478 aa23.68■■□□□ 1.38
SLC22A4-201ENST00000200652 ANKRD26Q9UPS8 1709 aa23.67■■□□□ 1.38
SLC22A4-201ENST00000200652 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.67■■□□□ 1.38
SLC22A4-201ENST00000200652 GGNBP2Q9H3C7 697 aa23.67■■□□□ 1.38
SLC22A4-201ENST00000200652 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
SLC22A4-201ENST00000200652 TCP11L2Q8N4U5 519 aa23.66■■□□□ 1.38
SLC22A4-201ENST00000200652 FYB1O15117 783 aa23.65■■□□□ 1.38
SLC22A4-201ENST00000200652 WAPLQ7Z5K2 1190 aa23.65■■□□□ 1.38
SLC22A4-201ENST00000200652 MED14O60244 1454 aa23.65■■□□□ 1.38
SLC22A4-201ENST00000200652 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.64■■□□□ 1.38
SLC22A4-201ENST00000200652 ANP32EQ9BTT0 268 aa23.64■■□□□ 1.38
SLC22A4-201ENST00000200652 NLRP1Q9C000 1473 aa23.64■■□□□ 1.38
SLC22A4-201ENST00000200652 HDGFL2Q7Z4V5 671 aaPredicted RBP23.63■■□□□ 1.37
SLC22A4-201ENST00000200652 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
SLC22A4-201ENST00000200652 CABP1Q9NZU7 370 aa23.63■■□□□ 1.37
SLC22A4-201ENST00000200652 RRP7AQ9Y3A4 280 aaKnown RBP23.63■■□□□ 1.37
SLC22A4-201ENST00000200652 NEUROD2Q15784 382 aa23.63■■□□□ 1.37
SLC22A4-201ENST00000200652 BCAR3O75815 825 aa23.6■■□□□ 1.37
SLC22A4-201ENST00000200652 U2AF1L5P0DN76 240 aaPredicted RBP23.6■■□□□ 1.37
SLC22A4-201ENST00000200652 U2AF1Q01081 240 aaKnown RBP eCLIP23.6■■□□□ 1.37
SLC22A4-201ENST00000200652 TNRQ92752 1358 aa23.59■■□□□ 1.37
SLC22A4-201ENST00000200652 KIF20BQ96Q89 1820 aa23.59■■□□□ 1.37
SLC22A4-201ENST00000200652 TCERG1O14776 1098 aaKnown RBP23.59■■□□□ 1.37
SLC22A4-201ENST00000200652 METP08581 1390 aa23.59■■□□□ 1.37
SLC22A4-201ENST00000200652 CCDC27Q2M243 656 aa23.59■■□□□ 1.37
SLC22A4-201ENST00000200652 COL3A1P02461 1466 aaPredicted RBP23.58■■□□□ 1.37
SLC22A4-201ENST00000200652 WDR63Q8IWG1 891 aa23.58■■□□□ 1.37
SLC22A4-201ENST00000200652 NCBP3Q53F19 620 aaKnown RBP23.57■■□□□ 1.36
SLC22A4-201ENST00000200652 MYT1Q01538 1121 aa23.57■■□□□ 1.36
SLC22A4-201ENST00000200652 ADGRB2O60241 1585 aa23.56■■□□□ 1.36
SLC22A4-201ENST00000200652 ATP7BP35670 1465 aa23.56■■□□□ 1.36
SLC22A4-201ENST00000200652 HDGFP51858 240 aaKnown RBP23.56■■□□□ 1.36
SLC22A4-201ENST00000200652 UBR1Q8IWV7 1749 aa23.55■■□□□ 1.36
SLC22A4-201ENST00000200652 KNDC1Q76NI1 1749 aa23.54■■□□□ 1.36
SLC22A4-201ENST00000200652 KDM2BQ8NHM5 1336 aa23.53■■□□□ 1.36
SLC22A4-201ENST00000200652 WASLO00401 505 aaPredicted RBP23.52■■□□□ 1.36
SLC22A4-201ENST00000200652 TXNDC2Q86VQ3 553 aa23.52■■□□□ 1.36
SLC22A4-201ENST00000200652 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
SLC22A4-201ENST00000200652 U2SURPO15042 1029 aaKnown RBP23.51■■□□□ 1.35
SLC22A4-201ENST00000200652 MS4A1P11836 297 aa23.51■■□□□ 1.35
SLC22A4-201ENST00000200652 SIRT1Q96EB6 747 aa23.51■■□□□ 1.35
SLC22A4-201ENST00000200652 PLEKHF1Q96S99 279 aa23.51■■□□□ 1.35
SLC22A4-201ENST00000200652 TECPR2O15040 1411 aa23.5■■□□□ 1.35
SLC22A4-201ENST00000200652 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
SLC22A4-201ENST00000200652 PNPLA6Q8IY17 1366 aa23.5■■□□□ 1.35
SLC22A4-201ENST00000200652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.49■■□□□ 1.35
SLC22A4-201ENST00000200652 CENPQQ7L2Z9 268 aaPredicted RBP23.48■■□□□ 1.35
SLC22A4-201ENST00000200652 CPSF1Q10570 1443 aaKnown RBP23.48■■□□□ 1.35
SLC22A4-201ENST00000200652 CPS1P31327 1500 aa23.48■■□□□ 1.35
SLC22A4-201ENST00000200652 PPIP5K1Q6PFW1 1433 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms