RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 RARSP54136 660 aaKnown RBP12.49□□□□□ -0.41
CLDN18-201ENST00000183605 RNF214Q8ND24 703 aa12.49□□□□□ -0.41
CLDN18-201ENST00000183605 RLBP1P12271 317 aa12.49□□□□□ -0.41
CLDN18-201ENST00000183605 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
CLDN18-201ENST00000183605 KIF14Q15058 1648 aa12.48□□□□□ -0.41
CLDN18-201ENST00000183605 ARAP3Q8WWN8 1544 aa12.48□□□□□ -0.41
CLDN18-201ENST00000183605 NINLQ9Y2I6 1382 aa12.48□□□□□ -0.41
CLDN18-201ENST00000183605 TESK2Q96S53 571 aa12.48□□□□□ -0.41
CLDN18-201ENST00000183605 MPNDQ8N594 471 aa12.48□□□□□ -0.41
CLDN18-201ENST00000183605 NGEFQ8N5V2 710 aa12.48□□□□□ -0.41
CLDN18-201ENST00000183605 KIAA2012Q0VF49 1180 aa12.47□□□□□ -0.41
CLDN18-201ENST00000183605 UHRF1BP1Q6BDS2 1440 aa12.47□□□□□ -0.41
CLDN18-201ENST00000183605 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
CLDN18-201ENST00000183605 U2AF1L5P0DN76 240 aaPredicted RBP12.46□□□□□ -0.41
CLDN18-201ENST00000183605 U2AF1Q01081 240 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLDN18-201ENST00000183605 ANKRD45Q5TZF3 282 aa12.46□□□□□ -0.41
CLDN18-201ENST00000183605 MVPQ14764 893 aaKnown RBP12.46□□□□□ -0.41
CLDN18-201ENST00000183605 CFAP74Q9C0B2 1584 aa12.46□□□□□ -0.41
CLDN18-201ENST00000183605 RAPGEF6Q8TEU7 1601 aa12.46□□□□□ -0.42
CLDN18-201ENST00000183605 K7ELQ4 463 aaPredicted RBP12.45□□□□□ -0.42
CLDN18-201ENST00000183605 ZNF521Q96K83 1311 aa12.45□□□□□ -0.42
CLDN18-201ENST00000183605 LRRIQ1Q96JM4 1722 aa12.45□□□□□ -0.42
CLDN18-201ENST00000183605 U2SURPO15042 1029 aaKnown RBP12.45□□□□□ -0.42
CLDN18-201ENST00000183605 POLR1AO95602 1720 aaPredicted RBP12.45□□□□□ -0.42
CLDN18-201ENST00000183605 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
CLDN18-201ENST00000183605 PRPF40AO75400 957 aaKnown RBP12.45□□□□□ -0.42
CLDN18-201ENST00000183605 RIPK4P57078 832 aa12.45□□□□□ -0.42
CLDN18-201ENST00000183605 DDX19BQ9UMR2 479 aa12.45□□□□□ -0.42
CLDN18-201ENST00000183605 INSRP06213 1382 aa12.44□□□□□ -0.42
CLDN18-201ENST00000183605 CDK11BP21127 795 aaKnown RBP12.44□□□□□ -0.42
CLDN18-201ENST00000183605 CCDC39Q9UFE4 941 aa12.44□□□□□ -0.42
CLDN18-201ENST00000183605 PLB1Q6P1J6 1458 aa12.44□□□□□ -0.42
CLDN18-201ENST00000183605 CBX1P83916 185 aa12.44□□□□□ -0.42
CLDN18-201ENST00000183605 RAB3GAP1Q15042 981 aa12.44□□□□□ -0.42
CLDN18-201ENST00000183605 RUNDC1Q96C34 613 aa12.44□□□□□ -0.42
CLDN18-201ENST00000183605 DYNC1I1O14576 645 aa12.43□□□□□ -0.42
CLDN18-201ENST00000183605 KLHL40Q2TBA0 621 aa12.43□□□□□ -0.42
CLDN18-201ENST00000183605 BAG4O95429 457 aaKnown RBP12.43□□□□□ -0.42
CLDN18-201ENST00000183605 SASS6Q6UVJ0 657 aa12.42□□□□□ -0.42
CLDN18-201ENST00000183605 SMAP1Q8IYB5 467 aaPredicted RBP12.42□□□□□ -0.42
CLDN18-201ENST00000183605 NUCB2P80303 420 aa12.42□□□□□ -0.42
CLDN18-201ENST00000183605 FOXD4L6Q3SYB3 417 aaPredicted RBP12.42□□□□□ -0.42
CLDN18-201ENST00000183605 FOXD4L3Q6VB84 417 aaPredicted RBP12.42□□□□□ -0.42
CLDN18-201ENST00000183605 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
CLDN18-201ENST00000183605 CHMP7Q8WUX9 453 aaPredicted RBP12.42□□□□□ -0.42
CLDN18-201ENST00000183605 PPP1R9BQ96SB3 815 aa12.42□□□□□ -0.42
CLDN18-201ENST00000183605 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
CLDN18-201ENST00000183605 CHAF1AQ13111 956 aaPredicted RBP12.41□□□□□ -0.42
CLDN18-201ENST00000183605 TRMT2AQ8IZ69 625 aaKnown RBP12.41□□□□□ -0.42
CLDN18-201ENST00000183605 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
CLDN18-201ENST00000183605 TSR2Q969E8 191 aaKnown RBP12.41□□□□□ -0.42
CLDN18-201ENST00000183605 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
CLDN18-201ENST00000183605 CAMSAP2Q08AD1 1489 aa12.41□□□□□ -0.42
CLDN18-201ENST00000183605 CARMIL2Q6F5E8 1435 aa12.4□□□□□ -0.42
CLDN18-201ENST00000183605 TERF1P54274 439 aa12.4□□□□□ -0.43
CLDN18-201ENST00000183605 ZSCAN23Q3MJ62 389 aa12.4□□□□□ -0.43
CLDN18-201ENST00000183605 SNX21Q969T3 373 aa12.4□□□□□ -0.43
CLDN18-201ENST00000183605 RBM27Q9P2N5 1060 aaKnown RBP12.4□□□□□ -0.43
CLDN18-201ENST00000183605 ZKSCAN5Q9Y2L8 839 aa12.4□□□□□ -0.43
CLDN18-201ENST00000183605 SYCE3A1L190 88 aa12.39□□□□□ -0.43
CLDN18-201ENST00000183605 NOL7Q9UMY1 257 aaKnown RBP12.39□□□□□ -0.43
CLDN18-201ENST00000183605 PRAG1Q86YV5 1406 aa12.39□□□□□ -0.43
CLDN18-201ENST00000183605 APBB1O00213 710 aa12.39□□□□□ -0.43
CLDN18-201ENST00000183605 C9orf84Q5VXU9 1444 aa12.39□□□□□ -0.43
CLDN18-201ENST00000183605 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
CLDN18-201ENST00000183605 GAS2L2Q8NHY3 880 aa12.38□□□□□ -0.43
CLDN18-201ENST00000183605 COL17A1Q9UMD9 1497 aaPredicted RBP12.38□□□□□ -0.43
CLDN18-201ENST00000183605 EXOSC9Q06265 439 aaKnown RBP12.38□□□□□ -0.43
CLDN18-201ENST00000183605 ZNF771Q7L3S4 317 aaPredicted RBP12.38□□□□□ -0.43
CLDN18-201ENST00000183605 RBSNQ9H1K0 784 aa12.38□□□□□ -0.43
CLDN18-201ENST00000183605 ARHGEF12Q9NZN5 1544 aa12.38□□□□□ -0.43
CLDN18-201ENST00000183605 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
CLDN18-201ENST00000183605 PRDM4Q9UKN5 801 aa12.38□□□□□ -0.43
CLDN18-201ENST00000183605 FRMPD1Q5SYB0 1578 aa12.37□□□□□ -0.43
CLDN18-201ENST00000183605 CASC1Q6TDU7 716 aa12.37□□□□□ -0.43
CLDN18-201ENST00000183605 NOL8Q76FK4 1167 aaKnown RBP12.37□□□□□ -0.43
CLDN18-201ENST00000183605 CHD1LQ86WJ1 897 aa12.37□□□□□ -0.43
CLDN18-201ENST00000183605 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
CLDN18-201ENST00000183605 DNMT1P26358 1616 aaKnown RBP12.37□□□□□ -0.43
CLDN18-201ENST00000183605 CCDC94Q9BW85 323 aaPredicted RBP12.37□□□□□ -0.43
CLDN18-201ENST00000183605 REREQ9P2R6 1566 aa12.37□□□□□ -0.43
CLDN18-201ENST00000183605 ST18O60284 1047 aa12.36□□□□□ -0.43
CLDN18-201ENST00000183605 HS1BP3Q53T59 392 aa12.36□□□□□ -0.43
CLDN18-201ENST00000183605 SYAP1Q96A49 352 aaPredicted RBP12.36□□□□□ -0.43
CLDN18-201ENST00000183605 WDR63Q8IWG1 891 aa12.36□□□□□ -0.43
CLDN18-201ENST00000183605 TSC1Q92574 1164 aa12.36□□□□□ -0.43
CLDN18-201ENST00000183605 NOB1Q9ULX3 412 aaKnown RBP12.36□□□□□ -0.43
CLDN18-201ENST00000183605 RICTORQ6R327 1708 aa12.36□□□□□ -0.43
CLDN18-201ENST00000183605 ATF7IPQ6VMQ6 1270 aa12.35□□□□□ -0.43
CLDN18-201ENST00000183605 C1orf115Q9H7X2 142 aa12.35□□□□□ -0.43
CLDN18-201ENST00000183605 FAM177BA6PVY3 158 aa12.35□□□□□ -0.43
CLDN18-201ENST00000183605 TRIM27P14373 513 aa12.35□□□□□ -0.43
CLDN18-201ENST00000183605 RBM25P49756 843 aaKnown RBP12.35□□□□□ -0.43
CLDN18-201ENST00000183605 MTHFSP49914 203 aa12.35□□□□□ -0.43
CLDN18-201ENST00000183605 HMGN5P82970 282 aaKnown RBP12.35□□□□□ -0.43
CLDN18-201ENST00000183605 PDE4CQ08493 712 aa12.35□□□□□ -0.43
CLDN18-201ENST00000183605 TMEM57Q8N5G2 664 aa12.35□□□□□ -0.43
CLDN18-201ENST00000183605 ZNF692Q9BU19 519 aaPredicted RBP12.35□□□□□ -0.43
CLDN18-201ENST00000183605 TROQ12816 1431 aaPredicted RBP12.35□□□□□ -0.43
CLDN18-201ENST00000183605 SPDYE4A6NLX3 237 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms