RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 PPP2R1AP30153 589 aa14.13□□□□□ -0.15
PKP2-201ENST00000070846 G3BP1Q13283 466 aaKnown RBP eCLIP14.13□□□□□ -0.15
PKP2-201ENST00000070846 NGLY1Q96IV0 654 aa14.13□□□□□ -0.15
PKP2-201ENST00000070846 HSPA2P54652 639 aa14.12□□□□□ -0.15
PKP2-201ENST00000070846 CABP4P57796 275 aa14.12□□□□□ -0.15
PKP2-201ENST00000070846 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
PKP2-201ENST00000070846 RAD21O60216 631 aa14.12□□□□□ -0.15
PKP2-201ENST00000070846 ASXL2Q76L83 1435 aa14.11□□□□□ -0.15
PKP2-201ENST00000070846 AMER1Q5JTC6 1135 aaPredicted RBP14.11□□□□□ -0.15
PKP2-201ENST00000070846 ERICH6BQ5W0A0 696 aa14.11□□□□□ -0.15
PKP2-201ENST00000070846 NOL10Q9BSC4 688 aaKnown RBP14.11□□□□□ -0.15
PKP2-201ENST00000070846 NAIPQ13075 1403 aa14.11□□□□□ -0.15
PKP2-201ENST00000070846 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
PKP2-201ENST00000070846 IFIT2P09913 472 aaKnown RBP14.11□□□□□ -0.15
PKP2-201ENST00000070846 DDX19BQ9UMR2 479 aa14.11□□□□□ -0.15
PKP2-201ENST00000070846 ZNF428Q96B54 188 aa14.11□□□□□ -0.15
PKP2-201ENST00000070846 ADGRF5Q8IZF2 1346 aa14.1□□□□□ -0.15
PKP2-201ENST00000070846 ATAD2Q6PL18 1390 aa14.1□□□□□ -0.15
PKP2-201ENST00000070846 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
PKP2-201ENST00000070846 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
PKP2-201ENST00000070846 SLKQ9H2G2 1235 aaPredicted RBP14.1□□□□□ -0.15
PKP2-201ENST00000070846 APPP05067 770 aa14.1□□□□□ -0.15
PKP2-201ENST00000070846 ZBED9Q6R2W3 1325 aa14.1□□□□□ -0.15
PKP2-201ENST00000070846 NEUROD6Q96NK8 337 aa14.1□□□□□ -0.15
PKP2-201ENST00000070846 ABCC5O15440 1437 aa14.09□□□□□ -0.15
PKP2-201ENST00000070846 EXOC6Q8TAG9 804 aa14.09□□□□□ -0.15
PKP2-201ENST00000070846 SPG7Q9UQ90 795 aa14.09□□□□□ -0.15
PKP2-201ENST00000070846 CRBNQ96SW2 442 aa14.09□□□□□ -0.15
PKP2-201ENST00000070846 UBAP1LF5GYI3 381 aa14.09□□□□□ -0.15
PKP2-201ENST00000070846 HDGFL1Q5TGJ6 251 aa14.08□□□□□ -0.15
PKP2-201ENST00000070846 UNC13AQ9UPW8 1703 aa14.08□□□□□ -0.16
PKP2-201ENST00000070846 CAMSAP2Q08AD1 1489 aa14.08□□□□□ -0.16
PKP2-201ENST00000070846 KIF16BQ96L93 1317 aa14.08□□□□□ -0.16
PKP2-201ENST00000070846 DIAPH3Q9NSV4 1193 aa14.08□□□□□ -0.16
PKP2-201ENST00000070846 ROCK1Q13464 1354 aa14.08□□□□□ -0.16
PKP2-201ENST00000070846 KCNH5Q8NCM2 988 aa14.07□□□□□ -0.16
PKP2-201ENST00000070846 CUL7Q14999 1698 aa14.07□□□□□ -0.16
PKP2-201ENST00000070846 RRP1P56182 461 aaKnown RBP14.07□□□□□ -0.16
PKP2-201ENST00000070846 CADPS2Q86UW7 1296 aa14.07□□□□□ -0.16
PKP2-201ENST00000070846 DHX29Q7Z478 1369 aaKnown RBP14.07□□□□□ -0.16
PKP2-201ENST00000070846 LRRFIP1Q32MZ4 808 aaKnown RBP14.07□□□□□ -0.16
PKP2-201ENST00000070846 TRIM34Q9BYJ4 488 aa14.07□□□□□ -0.16
PKP2-201ENST00000070846 UBTFL1P0CB47 393 aaPredicted RBP14.07□□□□□ -0.16
PKP2-201ENST00000070846 NCOA1Q15788 1441 aa14.06□□□□□ -0.16
PKP2-201ENST00000070846 CCDC30Q5VVM6 783 aa14.06□□□□□ -0.16
PKP2-201ENST00000070846 SUPT6HQ7KZ85 1726 aaKnown RBP14.06□□□□□ -0.16
PKP2-201ENST00000070846 PTCD1O75127 700 aaKnown RBP14.06□□□□□ -0.16
PKP2-201ENST00000070846 VPS53Q5VIR6 699 aa14.06□□□□□ -0.16
PKP2-201ENST00000070846 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
PKP2-201ENST00000070846 EXOSC9Q06265 439 aaKnown RBP14.05□□□□□ -0.16
PKP2-201ENST00000070846 NOP58Q9Y2X3 529 aaKnown RBP14.05□□□□□ -0.16
PKP2-201ENST00000070846 KIF6Q6ZMV9 814 aa14.04□□□□□ -0.16
PKP2-201ENST00000070846 RASSF8Q8NHQ8 419 aa14.04□□□□□ -0.16
PKP2-201ENST00000070846 ATP10BO94823 1461 aa14.04□□□□□ -0.16
PKP2-201ENST00000070846 TWISTNBQ3B726 338 aaPredicted RBP14.04□□□□□ -0.16
PKP2-201ENST00000070846 TSR2Q969E8 191 aaKnown RBP14.04□□□□□ -0.16
PKP2-201ENST00000070846 NME9Q86XW9 330 aa14.04□□□□□ -0.16
PKP2-201ENST00000070846 AMOTL1Q8IY63 956 aa14.04□□□□□ -0.16
PKP2-201ENST00000070846 CDCA7LQ96GN5 454 aa14.04□□□□□ -0.16
PKP2-201ENST00000070846 CNTLNQ9NXG0 1405 aa14.04□□□□□ -0.16
PKP2-201ENST00000070846 WASLO00401 505 aaPredicted RBP14.04□□□□□ -0.16
PKP2-201ENST00000070846 MARCH6O60337 910 aa14.04□□□□□ -0.16
PKP2-201ENST00000070846 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
PKP2-201ENST00000070846 PCF11O94913 1555 aaKnown RBP14.03□□□□□ -0.16
PKP2-201ENST00000070846 TNRQ92752 1358 aa14.03□□□□□ -0.16
PKP2-201ENST00000070846 PANK1Q8TE04 598 aa14.03□□□□□ -0.16
PKP2-201ENST00000070846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.03□□□□□ -0.16
PKP2-201ENST00000070846 MYL6BP14649 208 aa14.03□□□□□ -0.16
PKP2-201ENST00000070846 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
PKP2-201ENST00000070846 KRT28Q7Z3Y7 464 aa14.03□□□□□ -0.16
PKP2-201ENST00000070846 KIF14Q15058 1648 aa14.02□□□□□ -0.16
PKP2-201ENST00000070846 TOM1O60784 492 aa14.02□□□□□ -0.16
PKP2-201ENST00000070846 SLC4A2P04920 1241 aa14.02□□□□□ -0.17
PKP2-201ENST00000070846 DNTTIP2Q5QJE6 756 aaKnown RBP14.02□□□□□ -0.17
PKP2-201ENST00000070846 LNPKQ9C0E8 428 aa14.02□□□□□ -0.17
PKP2-201ENST00000070846 HSP90AB4PQ58FF6 505 aa14.01□□□□□ -0.17
PKP2-201ENST00000070846 CENPQQ7L2Z9 268 aaPredicted RBP14.01□□□□□ -0.17
PKP2-201ENST00000070846 USHBP1Q8N6Y0 703 aa14.01□□□□□ -0.17
PKP2-201ENST00000070846 BRD4O60885 1362 aaPredicted RBP14.01□□□□□ -0.17
PKP2-201ENST00000070846 SURF6O75683 361 aaKnown RBP14.01□□□□□ -0.17
PKP2-201ENST00000070846 CCDC27Q2M243 656 aa14□□□□□ -0.17
PKP2-201ENST00000070846 DHX16O60231 1041 aaKnown RBP14□□□□□ -0.17
PKP2-201ENST00000070846 RUFY2Q8WXA3 655 aa14□□□□□ -0.17
PKP2-201ENST00000070846 NRDCO43847 1150 aa14□□□□□ -0.17
PKP2-201ENST00000070846 AKAP17AQ02040 695 aaKnown RBP13.99□□□□□ -0.17
PKP2-201ENST00000070846 ST18O60284 1047 aa13.99□□□□□ -0.17
PKP2-201ENST00000070846 GNAI3P08754 354 aa13.99□□□□□ -0.17
PKP2-201ENST00000070846 CHRNA2Q15822 529 aa13.99□□□□□ -0.17
PKP2-201ENST00000070846 BICDL1Q6ZP65 573 aa13.99□□□□□ -0.17
PKP2-201ENST00000070846 CTDP1Q9Y5B0 961 aaPredicted RBP13.99□□□□□ -0.17
PKP2-201ENST00000070846 TEX14Q8IWB6 1497 aa13.99□□□□□ -0.17
PKP2-201ENST00000070846 PLCH2O75038 1416 aa13.99□□□□□ -0.17
PKP2-201ENST00000070846 HTATSF1O43719 755 aaKnown RBP13.99□□□□□ -0.17
PKP2-201ENST00000070846 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
PKP2-201ENST00000070846 FYB1O15117 783 aa13.98□□□□□ -0.17
PKP2-201ENST00000070846 WASHC4Q2M389 1173 aa13.98□□□□□ -0.17
PKP2-201ENST00000070846 PNISRQ8TF01 805 aaKnown RBP13.98□□□□□ -0.17
PKP2-201ENST00000070846 KIF3AQ9Y496 699 aa13.98□□□□□ -0.17
PKP2-201ENST00000070846 ZKSCAN1P17029 563 aaPredicted RBP13.98□□□□□ -0.17
PKP2-201ENST00000070846 CLASRPQ8N2M8 674 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms