RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 MS4A1P11836 297 aa15.37■□□□□ 0.05
TSPAN9-201ENST00000011898 SRPK2P78362 688 aaKnown RBP15.37■□□□□ 0.05
TSPAN9-201ENST00000011898 ARHGAP31Q2M1Z3 1444 aa15.37■□□□□ 0.05
TSPAN9-201ENST00000011898 TRPM2O94759 1503 aa15.36■□□□□ 0.05
TSPAN9-201ENST00000011898 MROH1Q8NDA8 1641 aa15.36■□□□□ 0.05
TSPAN9-201ENST00000011898 CAMSAP1Q5T5Y3 1602 aa15.36■□□□□ 0.05
TSPAN9-201ENST00000011898 PDE4AP27815 886 aa15.36■□□□□ 0.05
TSPAN9-201ENST00000011898 ZMYM3Q14202 1370 aa15.35■□□□□ 0.05
TSPAN9-201ENST00000011898 E9PCH4 1651 aa15.35■□□□□ 0.05
TSPAN9-201ENST00000011898 FAM13BQ9NYF5 915 aa15.35■□□□□ 0.05
TSPAN9-201ENST00000011898 PTPRTO14522 1441 aa15.35■□□□□ 0.05
TSPAN9-201ENST00000011898 U2AF1L5P0DN76 240 aaPredicted RBP15.35■□□□□ 0.05
TSPAN9-201ENST00000011898 U2AF1Q01081 240 aaKnown RBP eCLIP15.35■□□□□ 0.05
TSPAN9-201ENST00000011898 ZMYND15Q9H091 742 aa15.34■□□□□ 0.05
TSPAN9-201ENST00000011898 FBXO31Q5XUX0 539 aaPredicted RBP15.34■□□□□ 0.05
TSPAN9-201ENST00000011898 SPHKAPQ2M3C7 1700 aa15.33■□□□□ 0.05
TSPAN9-201ENST00000011898 STK26Q9P289 416 aa15.33■□□□□ 0.04
TSPAN9-201ENST00000011898 RPGRIP1LQ68CZ1 1315 aa15.33■□□□□ 0.04
TSPAN9-201ENST00000011898 TNRQ92752 1358 aa15.32■□□□□ 0.04
TSPAN9-201ENST00000011898 VGFO15240 615 aaPredicted RBP15.31■□□□□ 0.04
TSPAN9-201ENST00000011898 CHAF1AQ13111 956 aaPredicted RBP15.31■□□□□ 0.04
TSPAN9-201ENST00000011898 CLTCQ00610 1675 aaKnown RBP15.31■□□□□ 0.04
TSPAN9-201ENST00000011898 PLA2R1Q13018 1463 aa15.31■□□□□ 0.04
TSPAN9-201ENST00000011898 CRBNQ96SW2 442 aa15.31■□□□□ 0.04
TSPAN9-201ENST00000011898 CLUAP1Q96AJ1 413 aa15.3■□□□□ 0.04
TSPAN9-201ENST00000011898 IDI1Q13907 227 aa15.3■□□□□ 0.04
TSPAN9-201ENST00000011898 CFAP65Q6ZU64 1925 aaKnown RBP15.29■□□□□ 0.04
TSPAN9-201ENST00000011898 ERVK-7P63135 1459 aa15.29■□□□□ 0.04
TSPAN9-201ENST00000011898 EIF3AQ14152 1382 aaKnown RBP15.29■□□□□ 0.04
TSPAN9-201ENST00000011898 NOS1P29475 1434 aa15.28■□□□□ 0.04
TSPAN9-201ENST00000011898 HSP90AB1P08238 724 aaKnown RBP15.28■□□□□ 0.04
TSPAN9-201ENST00000011898 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.28■□□□□ 0.04
TSPAN9-201ENST00000011898 CEBPAP49715 358 aaPredicted RBP15.27■□□□□ 0.04
TSPAN9-201ENST00000011898 NFKBIBQ15653 356 aa15.27■□□□□ 0.04
TSPAN9-201ENST00000011898 EID1Q9Y6B2 187 aa15.27■□□□□ 0.04
TSPAN9-201ENST00000011898 APAF1O14727 1248 aa15.27■□□□□ 0.03
TSPAN9-201ENST00000011898 TRAK1Q9UPV9 953 aa15.27■□□□□ 0.03
TSPAN9-201ENST00000011898 CHMP4BQ9H444 224 aaKnown RBP15.26■□□□□ 0.03
TSPAN9-201ENST00000011898 RWDD1Q9H446 243 aaPredicted RBP15.26■□□□□ 0.03
TSPAN9-201ENST00000011898 CENPJQ9HC77 1338 aaPredicted RBP15.26■□□□□ 0.03
TSPAN9-201ENST00000011898 C11orf95C9JLR9 678 aaPredicted RBP15.26■□□□□ 0.03
TSPAN9-201ENST00000011898 KIF1BO60333 1816 aa15.26■□□□□ 0.03
TSPAN9-201ENST00000011898 CLTCL1P53675 1640 aa15.25■□□□□ 0.03
TSPAN9-201ENST00000011898 CENPQQ7L2Z9 268 aaPredicted RBP15.25■□□□□ 0.03
TSPAN9-201ENST00000011898 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
TSPAN9-201ENST00000011898 PNISRQ8TF01 805 aaKnown RBP15.24■□□□□ 0.03
TSPAN9-201ENST00000011898 NUTM2DQ5VT03 806 aaPredicted RBP15.24■□□□□ 0.03
TSPAN9-201ENST00000011898 HSCBQ8IWL3 235 aa15.24■□□□□ 0.03
TSPAN9-201ENST00000011898 CDCA7LQ96GN5 454 aa15.24■□□□□ 0.03
TSPAN9-201ENST00000011898 UGGT1Q9NYU2 1555 aa15.23■□□□□ 0.03
TSPAN9-201ENST00000011898 FAM43AQ8N2R8 423 aa15.23■□□□□ 0.03
TSPAN9-201ENST00000011898 SPATA31E1Q6ZUB1 1445 aa15.23■□□□□ 0.03
TSPAN9-201ENST00000011898 THEMISQ8N1K5 641 aaPredicted RBP15.23■□□□□ 0.03
TSPAN9-201ENST00000011898 PMFBP1Q8TBY8 1022 aa15.23■□□□□ 0.03
TSPAN9-201ENST00000011898 BRD4O60885 1362 aaPredicted RBP15.23■□□□□ 0.03
TSPAN9-201ENST00000011898 IPO8O15397 1037 aaKnown RBP15.22■□□□□ 0.03
TSPAN9-201ENST00000011898 NBPF1Q3BBV0 1214 aa15.22■□□□□ 0.03
TSPAN9-201ENST00000011898 ITPRIPQ8IWB1 547 aa15.22■□□□□ 0.03
TSPAN9-201ENST00000011898 PREX1Q8TCU6 1659 aa15.22■□□□□ 0.03
TSPAN9-201ENST00000011898 FER1L4A9Z1Z3 1794 aa15.21■□□□□ 0.03
TSPAN9-201ENST00000011898 FAM161AQ3B820 660 aa15.21■□□□□ 0.03
TSPAN9-201ENST00000011898 CASC1Q6TDU7 716 aa15.21■□□□□ 0.03
TSPAN9-201ENST00000011898 BCL2L13Q9BXK5 485 aa15.21■□□□□ 0.03
TSPAN9-201ENST00000011898 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
TSPAN9-201ENST00000011898 PDE4CQ08493 712 aa15.21■□□□□ 0.02
TSPAN9-201ENST00000011898 RRP9O43818 475 aaKnown RBP15.2■□□□□ 0.02
TSPAN9-201ENST00000011898 HDGFL2Q7Z4V5 671 aaPredicted RBP15.2■□□□□ 0.02
TSPAN9-201ENST00000011898 UHRF1BP1Q6BDS2 1440 aa15.2■□□□□ 0.02
TSPAN9-201ENST00000011898 E9PSI1 815 aa15.2■□□□□ 0.02
TSPAN9-201ENST00000011898 KIAA2012Q0VF49 1180 aa15.2■□□□□ 0.02
TSPAN9-201ENST00000011898 ADAMTS8Q9UP79 889 aa15.2■□□□□ 0.02
TSPAN9-201ENST00000011898 PRAG1Q86YV5 1406 aa15.2■□□□□ 0.02
TSPAN9-201ENST00000011898 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
TSPAN9-201ENST00000011898 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
TSPAN9-201ENST00000011898 SPATA31D1Q6ZQQ2 1576 aa15.18■□□□□ 0.02
TSPAN9-201ENST00000011898 SOX12O15370 315 aa15.18■□□□□ 0.02
TSPAN9-201ENST00000011898 RALGAPBQ86X10 1494 aa15.18■□□□□ 0.02
TSPAN9-201ENST00000011898 MROH2AA6NES4 1674 aa15.18■□□□□ 0.02
TSPAN9-201ENST00000011898 ADGRB3O60242 1522 aa15.17■□□□□ 0.02
TSPAN9-201ENST00000011898 ZNF771Q7L3S4 317 aaPredicted RBP15.17■□□□□ 0.02
TSPAN9-201ENST00000011898 GBP4Q96PP9 640 aa15.17■□□□□ 0.02
TSPAN9-201ENST00000011898 SYNMO15061 1565 aa15.17■□□□□ 0.02
TSPAN9-201ENST00000011898 RIMS2Q9UQ26 1411 aa15.16■□□□□ 0.02
TSPAN9-201ENST00000011898 ADGRF5Q8IZF2 1346 aa15.16■□□□□ 0.02
TSPAN9-201ENST00000011898 NEURL4Q96JN8 1562 aa15.16■□□□□ 0.02
TSPAN9-201ENST00000011898 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
TSPAN9-201ENST00000011898 MFAP1P55081 439 aaKnown RBP15.16■□□□□ 0.02
TSPAN9-201ENST00000011898 TXNDC2Q86VQ3 553 aa15.16■□□□□ 0.02
TSPAN9-201ENST00000011898 CGNL1Q0VF96 1302 aa15.15■□□□□ 0.02
TSPAN9-201ENST00000011898 CFAP70Q5T0N1 1121 aa15.15■□□□□ 0.02
TSPAN9-201ENST00000011898 SIGLEC1Q9BZZ2 1709 aa15.15■□□□□ 0.02
TSPAN9-201ENST00000011898 MYOM2P54296 1465 aa15.15■□□□□ 0.02
TSPAN9-201ENST00000011898 RBM10P98175 930 aaKnown RBP15.15■□□□□ 0.02
TSPAN9-201ENST00000011898 TERF2IPQ9NYB0 399 aa15.15■□□□□ 0.02
TSPAN9-201ENST00000011898 MADDQ8WXG6 1647 aa15.15■□□□□ 0.02
TSPAN9-201ENST00000011898 APBB1O00213 710 aa15.13■□□□□ 0.01
TSPAN9-201ENST00000011898 FRAT2O75474 233 aaPredicted RBP15.11■□□□□ 0.01
TSPAN9-201ENST00000011898 ANKLE2Q86XL3 938 aa15.11■□□□□ 0.01
TSPAN9-201ENST00000011898 SMG6Q86US8 1419 aaKnown RBP15.11■□□□□ 0.01
TSPAN9-201ENST00000011898 C14orf93Q9H972 538 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms