RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 FAM135BQ49AJ0 1406 aa14.31□□□□□ -0.12
CD9-201ENST00000009180 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
CD9-201ENST00000009180 FBXO41Q8TF61 875 aa14.3□□□□□ -0.12
CD9-201ENST00000009180 POGKQ9P215 609 aa14.3□□□□□ -0.12
CD9-201ENST00000009180 SCAF1Q9H7N4 1312 aaKnown RBP14.3□□□□□ -0.12
CD9-201ENST00000009180 ADGRL3Q9HAR2 1447 aa14.29□□□□□ -0.12
CD9-201ENST00000009180 QRICH2Q9H0J4 1663 aa14.27□□□□□ -0.12
CD9-201ENST00000009180 USP47Q96K76 1375 aa14.27□□□□□ -0.12
CD9-201ENST00000009180 MINK1Q8N4C8 1332 aaPredicted RBP14.27□□□□□ -0.12
CD9-201ENST00000009180 SIRT1Q96EB6 747 aa14.27□□□□□ -0.13
CD9-201ENST00000009180 HIRIP3Q9BW71 556 aaPredicted RBP14.27□□□□□ -0.13
CD9-201ENST00000009180 MSH6P52701 1360 aa14.26□□□□□ -0.13
CD9-201ENST00000009180 CENPJQ9HC77 1338 aaPredicted RBP14.26□□□□□ -0.13
CD9-201ENST00000009180 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
CD9-201ENST00000009180 NCOA3Q9Y6Q9 1424 aa14.25□□□□□ -0.13
CD9-201ENST00000009180 EIF3AQ14152 1382 aaKnown RBP14.25□□□□□ -0.13
CD9-201ENST00000009180 KCNA4P22459 653 aa14.24□□□□□ -0.13
CD9-201ENST00000009180 ADGRB2O60241 1585 aa14.24□□□□□ -0.13
CD9-201ENST00000009180 CDC42BPGQ6DT37 1551 aa14.24□□□□□ -0.13
CD9-201ENST00000009180 C19orf44Q9H6X5 657 aa14.23□□□□□ -0.13
CD9-201ENST00000009180 TULP4Q9NRJ4 1543 aa14.23□□□□□ -0.13
CD9-201ENST00000009180 ST20-MTHFSA0A0A6YYL1 179 aa14.22□□□□□ -0.13
CD9-201ENST00000009180 DCCP43146 1447 aa14.22□□□□□ -0.13
CD9-201ENST00000009180 NUTM2FA1L443 756 aa14.21□□□□□ -0.13
CD9-201ENST00000009180 UBAP1LF5GYI3 381 aa14.21□□□□□ -0.13
CD9-201ENST00000009180 HSPA5P11021 654 aaKnown RBP14.21□□□□□ -0.13
CD9-201ENST00000009180 ATF3P18847 181 aa14.21□□□□□ -0.13
CD9-201ENST00000009180 FMN2Q9NZ56 1722 aa14.21□□□□□ -0.14
CD9-201ENST00000009180 ZEB1P37275 1124 aaPredicted RBP14.2□□□□□ -0.14
CD9-201ENST00000009180 MST1RQ04912 1400 aa14.2□□□□□ -0.14
CD9-201ENST00000009180 EIF4G2P78344 907 aaKnown RBP eCLIP14.19□□□□□ -0.14
CD9-201ENST00000009180 TESK2Q96S53 571 aa14.19□□□□□ -0.14
CD9-201ENST00000009180 WASLO00401 505 aaPredicted RBP14.18□□□□□ -0.14
CD9-201ENST00000009180 CADPS2Q86UW7 1296 aa14.18□□□□□ -0.14
CD9-201ENST00000009180 USP32Q8NFA0 1604 aa14.18□□□□□ -0.14
CD9-201ENST00000009180 PRR36Q9H6K5 1346 aa14.17□□□□□ -0.14
CD9-201ENST00000009180 PIP4K2BP78356 416 aa14.17□□□□□ -0.14
CD9-201ENST00000009180 CDK19Q9BWU1 502 aa14.17□□□□□ -0.14
CD9-201ENST00000009180 DISP3Q9P2K9 1392 aa14.17□□□□□ -0.14
CD9-201ENST00000009180 SBNO2Q9Y2G9 1366 aa14.17□□□□□ -0.14
CD9-201ENST00000009180 C1orf167Q5SNV9 1468 aa14.17□□□□□ -0.14
CD9-201ENST00000009180 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
CD9-201ENST00000009180 SLAIN2Q9P270 581 aa14.16□□□□□ -0.14
CD9-201ENST00000009180 ATP7BP35670 1465 aa14.15□□□□□ -0.14
CD9-201ENST00000009180 TOM1O60784 492 aa14.15□□□□□ -0.14
CD9-201ENST00000009180 SRPK2P78362 688 aaKnown RBP14.15□□□□□ -0.14
CD9-201ENST00000009180 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
CD9-201ENST00000009180 ORAI2Q96SN7 254 aa14.14□□□□□ -0.15
CD9-201ENST00000009180 EVC2Q86UK5 1308 aa14.14□□□□□ -0.15
CD9-201ENST00000009180 ROBO1Q9Y6N7 1651 aa14.14□□□□□ -0.15
CD9-201ENST00000009180 ANKARQ7Z5J8 1434 aa14.13□□□□□ -0.15
CD9-201ENST00000009180 RGPD8O14715 1765 aaPredicted RBP14.12□□□□□ -0.15
CD9-201ENST00000009180 ESCO1Q5FWF5 840 aa14.12□□□□□ -0.15
CD9-201ENST00000009180 BRINP3Q76B58 766 aa14.12□□□□□ -0.15
CD9-201ENST00000009180 NUDT16Q96DE0 195 aaKnown RBP14.12□□□□□ -0.15
CD9-201ENST00000009180 TOPAZ1Q8N9V7 1692 aa14.11□□□□□ -0.15
CD9-201ENST00000009180 TMF1P82094 1093 aa14.1□□□□□ -0.15
CD9-201ENST00000009180 DDX17Q92841 729 aaKnown RBP14.1□□□□□ -0.15
CD9-201ENST00000009180 C11orf95C9JLR9 678 aaPredicted RBP14.09□□□□□ -0.15
CD9-201ENST00000009180 PMFBP1Q8TBY8 1022 aa14.09□□□□□ -0.15
CD9-201ENST00000009180 PPIP5K1Q6PFW1 1433 aa14.08□□□□□ -0.15
CD9-201ENST00000009180 ITSN1Q15811 1721 aa14.08□□□□□ -0.16
CD9-201ENST00000009180 POLR3GLQ9BT43 218 aa14.08□□□□□ -0.16
CD9-201ENST00000009180 PHF8Q9UPP1 1060 aa14.08□□□□□ -0.16
CD9-201ENST00000009180 KIF1AQ12756 1690 aa14.07□□□□□ -0.16
CD9-201ENST00000009180 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
CD9-201ENST00000009180 NHSL1Q5SYE7 1610 aa14.07□□□□□ -0.16
CD9-201ENST00000009180 ATAD2Q6PL18 1390 aa14.07□□□□□ -0.16
CD9-201ENST00000009180 XPCQ01831 940 aaPredicted RBP14.06□□□□□ -0.16
CD9-201ENST00000009180 CABP1Q9NZU7 370 aa14.06□□□□□ -0.16
CD9-201ENST00000009180 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
CD9-201ENST00000009180 AHDC1Q5TGY3 1603 aaPredicted RBP14.05□□□□□ -0.16
CD9-201ENST00000009180 MYOM1P52179 1685 aa14.05□□□□□ -0.16
CD9-201ENST00000009180 FOXO3O43524 673 aa14.05□□□□□ -0.16
CD9-201ENST00000009180 HSPA1LP34931 641 aa14.04□□□□□ -0.16
CD9-201ENST00000009180 TMC1Q8TDI8 760 aa14.04□□□□□ -0.16
CD9-201ENST00000009180 ACEP12821 1306 aa14.04□□□□□ -0.16
CD9-201ENST00000009180 KIF7Q2M1P5 1343 aa14.04□□□□□ -0.16
CD9-201ENST00000009180 PXDNQ92626 1479 aa14.04□□□□□ -0.16
CD9-201ENST00000009180 PHLPP1O60346 1717 aa14.04□□□□□ -0.16
CD9-201ENST00000009180 PLEKHG3A1L390 1219 aa14.03□□□□□ -0.16
CD9-201ENST00000009180 NGDNQ8NEJ9 315 aaKnown RBP14.03□□□□□ -0.16
CD9-201ENST00000009180 SLC12A5Q9H2X9 1139 aa14.03□□□□□ -0.16
CD9-201ENST00000009180 COL16A1Q07092 1604 aaPredicted RBP14.03□□□□□ -0.16
CD9-201ENST00000009180 CD163L1Q9NR16 1453 aa14.02□□□□□ -0.16
CD9-201ENST00000009180 POLR3AO14802 1390 aaPredicted RBP14.02□□□□□ -0.17
CD9-201ENST00000009180 NPHP3Q7Z494 1330 aa14.02□□□□□ -0.17
CD9-201ENST00000009180 CDCA8Q53HL2 280 aa14.02□□□□□ -0.17
CD9-201ENST00000009180 PUS7Q96PZ0 661 aaKnown RBP14.02□□□□□ -0.17
CD9-201ENST00000009180 CCDC7Q96M83 1385 aa14.01□□□□□ -0.17
CD9-201ENST00000009180 WASHC2AQ641Q2 1341 aa14.01□□□□□ -0.17
CD9-201ENST00000009180 KRT28Q7Z3Y7 464 aa14□□□□□ -0.17
CD9-201ENST00000009180 A0A1W2PP64 1363 aa13.99□□□□□ -0.17
CD9-201ENST00000009180 TRPM3Q9HCF6 1732 aaPredicted RBP13.99□□□□□ -0.17
CD9-201ENST00000009180 SOS2Q07890 1332 aaPredicted RBP13.99□□□□□ -0.17
CD9-201ENST00000009180 PSME1Q06323 249 aa13.99□□□□□ -0.17
CD9-201ENST00000009180 AKAP12Q02952 1782 aa13.99□□□□□ -0.17
CD9-201ENST00000009180 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
CD9-201ENST00000009180 USP6P35125 1406 aa13.98□□□□□ -0.17
CD9-201ENST00000009180 KTN1Q86UP2 1357 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms