RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SLC12A5Q9H2X9 1139 aa13.42□□□□□ -0.26
CX3CL1-201ENST00000006053 PTPRTO14522 1441 aa13.42□□□□□ -0.26
CX3CL1-201ENST00000006053 NINLQ9Y2I6 1382 aa13.41□□□□□ -0.26
CX3CL1-201ENST00000006053 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
CX3CL1-201ENST00000006053 POLR3AO14802 1390 aaPredicted RBP13.41□□□□□ -0.26
CX3CL1-201ENST00000006053 NSD3Q9BZ95 1437 aa13.4□□□□□ -0.26
CX3CL1-201ENST00000006053 ABCC1P33527 1531 aa13.4□□□□□ -0.26
CX3CL1-201ENST00000006053 MTHFSP49914 203 aa13.39□□□□□ -0.27
CX3CL1-201ENST00000006053 RWDD1Q9H446 243 aaPredicted RBP13.39□□□□□ -0.27
CX3CL1-201ENST00000006053 UGGT1Q9NYU2 1555 aa13.39□□□□□ -0.27
CX3CL1-201ENST00000006053 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
CX3CL1-201ENST00000006053 CEP152O94986 1710 aa13.39□□□□□ -0.27
CX3CL1-201ENST00000006053 PDE4CQ08493 712 aa13.38□□□□□ -0.27
CX3CL1-201ENST00000006053 TBC1D32Q96NH3 1257 aa13.38□□□□□ -0.27
CX3CL1-201ENST00000006053 CHD1O14646 1710 aa13.37□□□□□ -0.27
CX3CL1-201ENST00000006053 FTSJ3Q8IY81 847 aaKnown RBP13.37□□□□□ -0.27
CX3CL1-201ENST00000006053 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
CX3CL1-201ENST00000006053 FAM43AQ8N2R8 423 aa13.37□□□□□ -0.27
CX3CL1-201ENST00000006053 CFAP53Q96M91 514 aa13.37□□□□□ -0.27
CX3CL1-201ENST00000006053 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
CX3CL1-201ENST00000006053 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.27
CX3CL1-201ENST00000006053 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
CX3CL1-201ENST00000006053 WDR63Q8IWG1 891 aa13.36□□□□□ -0.27
CX3CL1-201ENST00000006053 GZF1Q9H116 711 aaPredicted RBP13.36□□□□□ -0.27
CX3CL1-201ENST00000006053 ANTXR1Q9H6X2 564 aa13.36□□□□□ -0.27
CX3CL1-201ENST00000006053 MFAP1P55081 439 aaKnown RBP13.35□□□□□ -0.27
CX3CL1-201ENST00000006053 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
CX3CL1-201ENST00000006053 RTEL1-TNFRSF6BF6WH68 1400 aa13.35□□□□□ -0.27
CX3CL1-201ENST00000006053 MYH16Q9H6N6 1097 aa13.34□□□□□ -0.27
CX3CL1-201ENST00000006053 TSR2Q969E8 191 aaKnown RBP13.34□□□□□ -0.27
CX3CL1-201ENST00000006053 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
CX3CL1-201ENST00000006053 AAMPQ13685 434 aa13.34□□□□□ -0.27
CX3CL1-201ENST00000006053 MVPQ14764 893 aaKnown RBP13.34□□□□□ -0.27
CX3CL1-201ENST00000006053 L1TD1Q5T7N2 865 aaKnown RBP13.34□□□□□ -0.27
CX3CL1-201ENST00000006053 ABCA6Q8N139 1617 aa13.33□□□□□ -0.27
CX3CL1-201ENST00000006053 VIRMAQ69YN4 1812 aaKnown RBP13.33□□□□□ -0.28
CX3CL1-201ENST00000006053 ZKSCAN2Q63HK3 967 aa13.33□□□□□ -0.28
CX3CL1-201ENST00000006053 DZIP1LQ8IYY4 767 aaKnown RBP13.33□□□□□ -0.28
CX3CL1-201ENST00000006053 MAP3K4Q9Y6R4 1608 aa13.33□□□□□ -0.28
CX3CL1-201ENST00000006053 TET3O43151 1660 aa13.33□□□□□ -0.28
CX3CL1-201ENST00000006053 NOS1P29475 1434 aa13.33□□□□□ -0.28
CX3CL1-201ENST00000006053 SMC4Q9NTJ3 1288 aa13.32□□□□□ -0.28
CX3CL1-201ENST00000006053 ZCCHC11Q5TAX3 1644 aaKnown RBP13.32□□□□□ -0.28
CX3CL1-201ENST00000006053 NUTM2DQ5VT03 806 aaPredicted RBP13.32□□□□□ -0.28
CX3CL1-201ENST00000006053 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
CX3CL1-201ENST00000006053 C22orf23Q9BZE7 217 aa13.32□□□□□ -0.28
CX3CL1-201ENST00000006053 U2SURPO15042 1029 aaKnown RBP13.31□□□□□ -0.28
CX3CL1-201ENST00000006053 PDIA4P13667 645 aaKnown RBP13.31□□□□□ -0.28
CX3CL1-201ENST00000006053 GGT6Q6P531 493 aa13.31□□□□□ -0.28
CX3CL1-201ENST00000006053 ITPRIPQ8IWB1 547 aa13.31□□□□□ -0.28
CX3CL1-201ENST00000006053 SHROOM2Q13796 1616 aa13.31□□□□□ -0.28
CX3CL1-201ENST00000006053 SAFB2Q14151 953 aaKnown RBP eCLIP13.31□□□□□ -0.28
CX3CL1-201ENST00000006053 MYOM2P54296 1465 aa13.31□□□□□ -0.28
CX3CL1-201ENST00000006053 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
CX3CL1-201ENST00000006053 HSP90AA2PQ14568 343 aaPredicted RBP13.3□□□□□ -0.28
CX3CL1-201ENST00000006053 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
CX3CL1-201ENST00000006053 RRAGDQ9NQL2 400 aaPredicted RBP13.3□□□□□ -0.28
CX3CL1-201ENST00000006053 GOLGA6L3A6NEY3 463 aa13.29□□□□□ -0.28
CX3CL1-201ENST00000006053 MCM4P33991 863 aa13.29□□□□□ -0.28
CX3CL1-201ENST00000006053 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
CX3CL1-201ENST00000006053 RBM10P98175 930 aaKnown RBP13.29□□□□□ -0.28
CX3CL1-201ENST00000006053 CCDC27Q2M243 656 aa13.29□□□□□ -0.28
CX3CL1-201ENST00000006053 SBNO2Q9Y2G9 1366 aa13.29□□□□□ -0.28
CX3CL1-201ENST00000006053 IQSEC2Q5JU85 1478 aa13.29□□□□□ -0.28
CX3CL1-201ENST00000006053 MLECQ14165 292 aa13.28□□□□□ -0.28
CX3CL1-201ENST00000006053 BCL11BQ9C0K0 894 aaPredicted RBP13.28□□□□□ -0.28
CX3CL1-201ENST00000006053 SHPRHQ149N8 1683 aa13.28□□□□□ -0.28
CX3CL1-201ENST00000006053 TRIM27P14373 513 aa13.28□□□□□ -0.28
CX3CL1-201ENST00000006053 FANCAO15360 1455 aa13.28□□□□□ -0.28
CX3CL1-201ENST00000006053 RAPGEF3O95398 923 aa13.27□□□□□ -0.28
CX3CL1-201ENST00000006053 XRCC6P12956 609 aaKnown RBP eCLIP13.27□□□□□ -0.28
CX3CL1-201ENST00000006053 C14orf93Q9H972 538 aaKnown RBP13.27□□□□□ -0.28
CX3CL1-201ENST00000006053 CABP2Q9NPB3 220 aa13.27□□□□□ -0.28
CX3CL1-201ENST00000006053 CHMP5Q9NZZ3 219 aa13.27□□□□□ -0.28
CX3CL1-201ENST00000006053 DEPDC5O75140 1603 aa13.27□□□□□ -0.28
CX3CL1-201ENST00000006053 ZNF518AQ6AHZ1 1483 aa13.27□□□□□ -0.29
CX3CL1-201ENST00000006053 SSH1Q8WYL5 1049 aa13.27□□□□□ -0.29
CX3CL1-201ENST00000006053 PANK2Q9BZ23 570 aa13.26□□□□□ -0.29
CX3CL1-201ENST00000006053 HSCBQ8IWL3 235 aa13.26□□□□□ -0.29
CX3CL1-201ENST00000006053 NOB1Q9ULX3 412 aaKnown RBP13.26□□□□□ -0.29
CX3CL1-201ENST00000006053 KIF1BO60333 1816 aa13.26□□□□□ -0.29
CX3CL1-201ENST00000006053 TRAK2O60296 914 aa13.25□□□□□ -0.29
CX3CL1-201ENST00000006053 VWDEQ8N2E2 1590 aa13.25□□□□□ -0.29
CX3CL1-201ENST00000006053 ADGRL1O94910 1474 aa13.25□□□□□ -0.29
CX3CL1-201ENST00000006053 NAP1L5Q96NT1 182 aaPredicted RBP13.25□□□□□ -0.29
CX3CL1-201ENST00000006053 GGNBP2Q9H3C7 697 aa13.25□□□□□ -0.29
CX3CL1-201ENST00000006053 DDX19BQ9UMR2 479 aa13.25□□□□□ -0.29
CX3CL1-201ENST00000006053 ZMYM3Q14202 1370 aa13.25□□□□□ -0.29
CX3CL1-201ENST00000006053 EVC2Q86UK5 1308 aa13.24□□□□□ -0.29
CX3CL1-201ENST00000006053 ATF7IPQ6VMQ6 1270 aa13.24□□□□□ -0.29
CX3CL1-201ENST00000006053 TMEM57Q8N5G2 664 aa13.24□□□□□ -0.29
CX3CL1-201ENST00000006053 CFAP65Q6ZU64 1925 aaKnown RBP13.24□□□□□ -0.29
CX3CL1-201ENST00000006053 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
CX3CL1-201ENST00000006053 MROH2AA6NES4 1674 aa13.23□□□□□ -0.29
CX3CL1-201ENST00000006053 FAM69CQ0P6D2 419 aa13.23□□□□□ -0.29
CX3CL1-201ENST00000006053 LNPKQ9C0E8 428 aa13.23□□□□□ -0.29
CX3CL1-201ENST00000006053 HDAC1Q13547 482 aaPredicted RBP13.23□□□□□ -0.29
CX3CL1-201ENST00000006053 STK26Q9P289 416 aa13.23□□□□□ -0.29
CX3CL1-201ENST00000006053 UHRF1BP1LA0JNW5 1464 aa13.22□□□□□ -0.29
CX3CL1-201ENST00000006053 SRPK2P78362 688 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms