RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Me1P06801 572 aa12.82□□□□□ -0.36
Vcan-202ENSMUST00000109544 IbspQ61711 324 aa12.82□□□□□ -0.36
Vcan-202ENSMUST00000109544 Usp40Q8BWR4 1235 aa12.82□□□□□ -0.36
Vcan-202ENSMUST00000109544 Cabp4Q8VHC5 271 aa12.82□□□□□ -0.36
Vcan-202ENSMUST00000109544 WrnO09053 1401 aa12.82□□□□□ -0.36
Vcan-202ENSMUST00000109544 Chmp7Q8R1T1 451 aa12.81□□□□□ -0.36
Vcan-202ENSMUST00000109544 Swt1Q9DBQ9 907 aa12.81□□□□□ -0.36
Vcan-202ENSMUST00000109544 Dhx16G3X8X0 1044 aaKnown RBP12.81□□□□□ -0.36
Vcan-202ENSMUST00000109544 OptnQ8K3K8 584 aa12.81□□□□□ -0.36
Vcan-202ENSMUST00000109544 Map9Q3TRR0 646 aa12.81□□□□□ -0.36
Vcan-202ENSMUST00000109544 Sycp1Q62209 993 aa12.81□□□□□ -0.36
Vcan-202ENSMUST00000109544 Fam43aQ8BUP8 424 aa12.81□□□□□ -0.36
Vcan-202ENSMUST00000109544 Hmox1P14901 289 aa12.81□□□□□ -0.36
Vcan-202ENSMUST00000109544 Fam184aE9PW83 1143 aa12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 Ercc6lQ8BHK9 1240 aa12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 Q8C5K5 320 aa12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 KarsQ99MN1 595 aaKnown RBP12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 Nek4Q9Z1J2 792 aa12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 PnisrA2AJT4 805 aaKnown RBP12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 Ttll13A4Q9F6 804 aa12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 Esx1O88933 382 aa12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 Rnf214Q8BFU3 668 aaKnown RBP12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 Dnaaf4Q8R368 420 aa12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 PrkcshO08795 521 aa12.8□□□□□ -0.36
Vcan-202ENSMUST00000109544 A0A0U1RNP2 1173 aa12.79□□□□□ -0.36
Vcan-202ENSMUST00000109544 Sart1Q9Z315 806 aaKnown RBP12.79□□□□□ -0.36
Vcan-202ENSMUST00000109544 Arid3cA6PWV5 409 aa12.79□□□□□ -0.36
Vcan-202ENSMUST00000109544 Pak3Q61036 559 aa12.79□□□□□ -0.36
Vcan-202ENSMUST00000109544 Cc2d1aQ8K1A6 943 aa12.79□□□□□ -0.36
Vcan-202ENSMUST00000109544 Gcc1Q9D4H2 778 aa12.79□□□□□ -0.36
Vcan-202ENSMUST00000109544 Usp16Q99LG0 825 aa12.78□□□□□ -0.36
Vcan-202ENSMUST00000109544 Ccdc83Q9D4V3 305 aa12.78□□□□□ -0.36
Vcan-202ENSMUST00000109544 Dhx29Q6PGC1 1365 aaKnown RBP12.78□□□□□ -0.36
Vcan-202ENSMUST00000109544 Bag1Q60739 355 aa12.78□□□□□ -0.36
Vcan-202ENSMUST00000109544 Gbp4Q61107 620 aa12.78□□□□□ -0.36
Vcan-202ENSMUST00000109544 Senp3Q9EP97 568 aaKnown RBP12.78□□□□□ -0.36
Vcan-202ENSMUST00000109544 NefhP19246 1090 aa12.78□□□□□ -0.36
Vcan-202ENSMUST00000109544 Odf2lQ9D478 642 aa12.78□□□□□ -0.36
Vcan-202ENSMUST00000109544 Samd1D3YXK1 519 aa12.77□□□□□ -0.36
Vcan-202ENSMUST00000109544 SelenooQ9DBC0 667 aa12.77□□□□□ -0.36
Vcan-202ENSMUST00000109544 Cavin1O54724 392 aa12.77□□□□□ -0.37
Vcan-202ENSMUST00000109544 Ccdc96Q9CR92 584 aa12.77□□□□□ -0.37
Vcan-202ENSMUST00000109544 Usp48Q3V0C5 1052 aa12.77□□□□□ -0.37
Vcan-202ENSMUST00000109544 Gnl3lQ6PGG6 577 aaKnown RBP12.76□□□□□ -0.37
Vcan-202ENSMUST00000109544 Rbm25B2RY56 838 aaKnown RBP12.76□□□□□ -0.37
Vcan-202ENSMUST00000109544 Lrrc45Q8CIM1 670 aa12.76□□□□□ -0.37
Vcan-202ENSMUST00000109544 Ecm2Q5FW85 670 aa12.76□□□□□ -0.37
Vcan-202ENSMUST00000109544 Nsd2Q8BVE8 1365 aa12.76□□□□□ -0.37
Vcan-202ENSMUST00000109544 Otud6bQ8K2H2 294 aa12.75□□□□□ -0.37
Vcan-202ENSMUST00000109544 Eif3aP23116 1344 aaKnown RBP12.75□□□□□ -0.37
Vcan-202ENSMUST00000109544 Ccdc102aQ3TMW1 549 aa12.75□□□□□ -0.37
Vcan-202ENSMUST00000109544 Stk38Q91VJ4 465 aa12.75□□□□□ -0.37
Vcan-202ENSMUST00000109544 Stim1P70302 685 aa12.75□□□□□ -0.37
Vcan-202ENSMUST00000109544 CenpqQ9CPQ5 267 aa12.75□□□□□ -0.37
Vcan-202ENSMUST00000109544 Arglu1Q3UL36 271 aaKnown RBP12.75□□□□□ -0.37
Vcan-202ENSMUST00000109544 Tnpo1Q8BFY9 898 aaKnown RBP12.75□□□□□ -0.37
Vcan-202ENSMUST00000109544 Q9D9S1 216 aa12.75□□□□□ -0.37
Vcan-202ENSMUST00000109544 Neurod6P48986 337 aa12.74□□□□□ -0.37
Vcan-202ENSMUST00000109544 Med4Q9CQA5 270 aa12.74□□□□□ -0.37
Vcan-202ENSMUST00000109544 Rsph6aQ8CDR2 708 aa12.74□□□□□ -0.37
Vcan-202ENSMUST00000109544 Cux2P70298 1426 aa12.74□□□□□ -0.37
Vcan-202ENSMUST00000109544 Tango6Q8C3S2 1079 aa12.74□□□□□ -0.37
Vcan-202ENSMUST00000109544 Sv2bQ8BG39 683 aa12.74□□□□□ -0.37
Vcan-202ENSMUST00000109544 Olfml1Q8BSH2 233 aa12.74□□□□□ -0.37
Vcan-202ENSMUST00000109544 Commd10Q8JZY2 202 aa12.74□□□□□ -0.37
Vcan-202ENSMUST00000109544 TnmdQ9EP64 317 aa12.73□□□□□ -0.37
Vcan-202ENSMUST00000109544 Spag5Q7TME2 1165 aa12.73□□□□□ -0.37
Vcan-202ENSMUST00000109544 Rbm10Q99KG3 930 aaKnown RBP12.73□□□□□ -0.37
Vcan-202ENSMUST00000109544 FanciQ8K368 1330 aa12.73□□□□□ -0.37
Vcan-202ENSMUST00000109544 CastP51125 788 aa12.73□□□□□ -0.37
Vcan-202ENSMUST00000109544 Jakmip2D3YXK0 820 aa12.73□□□□□ -0.37
Vcan-202ENSMUST00000109544 Pank1Q8K4K6 548 aa12.73□□□□□ -0.37
Vcan-202ENSMUST00000109544 ErbinQ80TH2 1402 aa12.72□□□□□ -0.37
Vcan-202ENSMUST00000109544 Cfdp1O88271 295 aaKnown RBP12.72□□□□□ -0.37
Vcan-202ENSMUST00000109544 Gtf2f1Q3THK3 508 aaKnown RBP12.72□□□□□ -0.37
Vcan-202ENSMUST00000109544 Rbm28Q8CGC6 750 aaKnown RBP12.72□□□□□ -0.37
Vcan-202ENSMUST00000109544 SrrtQ99MR6 875 aaKnown RBP12.72□□□□□ -0.37
Vcan-202ENSMUST00000109544 Krt85Q9Z2T6 507 aa12.72□□□□□ -0.37
Vcan-202ENSMUST00000109544 MicalclQ9D5U9 680 aa12.72□□□□□ -0.37
Vcan-202ENSMUST00000109544 Pmfbp1Q9WVQ0 1022 aa12.71□□□□□ -0.37
Vcan-202ENSMUST00000109544 Cux1P53564 1515 aa12.71□□□□□ -0.37
Vcan-202ENSMUST00000109544 Fmnl2A2APV2 1086 aa12.71□□□□□ -0.37
Vcan-202ENSMUST00000109544 Cfap45Q9D9U9 551 aa12.71□□□□□ -0.37
Vcan-202ENSMUST00000109544 Znf710Q3U288 666 aa12.71□□□□□ -0.38
Vcan-202ENSMUST00000109544 TxlnaQ6PAM1 554 aaKnown RBP12.71□□□□□ -0.38
Vcan-202ENSMUST00000109544 Rpgrip1lQ8CG73 1264 aa12.71□□□□□ -0.38
Vcan-202ENSMUST00000109544 NcapgE9PWG6 1004 aa12.71□□□□□ -0.38
Vcan-202ENSMUST00000109544 Rhot2Q8JZN7 620 aa12.71□□□□□ -0.38
Vcan-202ENSMUST00000109544 Shq1Q7TMX5 569 aa12.7□□□□□ -0.38
Vcan-202ENSMUST00000109544 Paf1Q8K2T8 535 aa12.7□□□□□ -0.38
Vcan-202ENSMUST00000109544 Sycp2Q9CUU3 1500 aa12.7□□□□□ -0.38
Vcan-202ENSMUST00000109544 Gsto1O09131 240 aa12.7□□□□□ -0.38
Vcan-202ENSMUST00000109544 Ccar2Q8VDP4 922 aaKnown RBP12.7□□□□□ -0.38
Vcan-202ENSMUST00000109544 FosbP13346 338 aa12.69□□□□□ -0.38
Vcan-202ENSMUST00000109544 ItpripQ3TNL8 555 aa12.69□□□□□ -0.38
Vcan-202ENSMUST00000109544 Cavin4A2AMM0 362 aa12.69□□□□□ -0.38
Vcan-202ENSMUST00000109544 Sptbn5F6UCX4 1208 aa12.69□□□□□ -0.38
Vcan-202ENSMUST00000109544 BbxQ8VBW5 907 aa12.69□□□□□ -0.38
Vcan-202ENSMUST00000109544 Cfap58B2RW38 873 aa12.68□□□□□ -0.38
Vcan-202ENSMUST00000109544 Prl7d1P04769 244 aa12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms