RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Tmco5bQ80X59 307 aa12.51□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 KnstrnQ9D9Z1 312 aaKnown RBP12.51□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Tsen2Q6P7W5 460 aa12.5□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Tmem94Q7TSH8 1360 aa12.5□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 GnpatP98192 678 aa12.5□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Ubap1lG3UW59 384 aa12.5□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Tom1O88746 492 aa12.5□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Ccar1Q8CH18 1146 aaKnown RBP12.5□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Znf330Q922H9 316 aa12.5□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Rprd2Q6NXI6 1469 aaKnown RBP12.49□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 U2surpQ6NV83 1029 aaKnown RBP12.49□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Q8BT18 775 aa12.49□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Rtn4Q99P72 1162 aaKnown RBP12.49□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Slc5a4bQ91ZP4 660 aa12.49□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Prrc2bQ7TPM1 1486 aaKnown RBP12.49□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Pik3c2gO70167 1506 aa12.49□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Kiaa1210E9Q0C6 1637 aa12.49□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Cdc42bpaQ3UU96 1719 aa12.49□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Zfp444Q3TDV8 331 aaKnown RBP12.48□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Gimap6Q8K349 305 aa12.48□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 GsdmaQ9EST1 446 aa12.48□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Ralbp1Q62172 648 aa12.48□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Rapgef3Q8VCC8 918 aa12.48□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Sf3b2Q3UJB0 878 aaKnown RBP12.48□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Podxl2Q8CAE9 603 aa12.48□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Trim44Q9QXA7 346 aa12.48□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 PtprgQ05909 1442 aa12.47□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Spryd3E9Q9B3 442 aa12.47□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Polr3aB2RXC6 1390 aa12.47□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 AglF8VPN4 1532 aa12.47□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Ncoa1P70365 1447 aa12.47□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Kdm6bQ5NCY0 1641 aa12.47□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Prkrip1Q9CWV6 186 aaKnown RBP12.46□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Plch2A2AP18 1501 aa12.46□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Nos1Q9Z0J4 1429 aa12.46□□□□□ -0.41
Cpsf1-201ENSMUST00000071898 Setbp1Q9Z180 1582 aa12.46□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Asxl2Q8BZ32 1370 aa12.46□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Asxl1P59598 1514 aa12.45□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Ccdc30Q8BVF4 654 aa12.45□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Gm21698A0A087WQP8 267 aa12.45□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Gm21671G3UY31 267 aa12.45□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Mast1Q9R1L5 1570 aa12.45□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 HnrnpuQ8VEK3 800 aaKnown RBP12.45□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Ppp2r1aQ76MZ3 589 aa12.45□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Dmrt2Q8BG36 561 aa12.45□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Farp2Q91VS8 1065 aa12.45□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Efcab6Q6P1E8 1516 aa12.45□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Stk31Q99MW1 1018 aa12.44□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Kif16bB1AVY7 1312 aa12.44□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Fmnl2A2APV2 1086 aa12.44□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Dnajc5gQ8C632 165 aa12.44□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Dennd6aQ8BH65 605 aa12.43□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 ZgpatQ8VDM1 511 aa12.43□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Usp54Q8BL06 1588 aaKnown RBP12.43□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Mfap1aC0HKD8 439 aaKnown RBP12.43□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Mfap1bC0HKD9 439 aaKnown RBP12.43□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Senp3Q9EP97 568 aaKnown RBP12.43□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Abcc3B2RX12 1523 aa12.42□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Dnttip2Q8R2M2 758 aaKnown RBP12.42□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Uggt2E9Q4X2 1504 aa12.42□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Rab3gap2Q8BMG7 1366 aa12.42□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 AdgbG3UZ78 1657 aa12.41□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Zpr1Q62384 459 aa12.41□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 PtmaP26350 111 aa12.41□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Supt6hQ62383 1726 aaKnown RBP12.41□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Abcc6Q9R1S7 1498 aa12.4□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Kif1bQ60575 1816 aaKnown RBP12.4□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Plekhh1Q80TI1 1356 aa12.4□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Trpm2Q91YD4 1506 aa12.4□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Skint5A7XUY5 1461 aa12.4□□□□□ -0.42
Cpsf1-201ENSMUST00000071898 Trim58Q5NCC9 485 aa12.4□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Ccdc60Q8C4J0 545 aa12.4□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 AatkQ80YE4 1365 aa12.39□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Ttc37F8VPK0 1563 aa12.39□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Gm10471E9Q1C7 252 aa12.39□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Zranb3Q6NZP1 1069 aa12.39□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Ciz1Q8VEH2 845 aa12.39□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 4933402E13RikQ9D4D2 429 aa12.39□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 PzpQ61838 1495 aa12.39□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Kcnh8P59111 1102 aa12.39□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 AlkP97793 1621 aa12.39□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Ipo4Q8VI75 1082 aa12.39□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 PrxO55103 1391 aa12.38□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Hsp90b1P08113 802 aaKnown RBP12.38□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Acsbg1Q99PU5 721 aa12.38□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Rab11fip3Q8CHD8 1047 aa12.38□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Ttll13A4Q9F6 804 aa12.38□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 L3mbtl2P59178 703 aa12.38□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Q3TQI7 289 aaKnown RBP12.38□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Dip2cE9PWR4 1557 aa12.37□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Hecw2Q6I6G8 1578 aa12.37□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Tnnt1O88346 262 aa12.37□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Slain2Q8CI08 581 aa12.37□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Chmp7Q8R1T1 451 aa12.37□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Idi2Q8BFZ6 227 aa12.36□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Pank1Q8K4K6 548 aa12.36□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Sart3Q9JLI8 962 aaKnown RBP12.35□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Hecw1Q8K4P8 1604 aa12.35□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Gsdma3Q5Y4Y6 464 aa12.35□□□□□ -0.43
Cpsf1-201ENSMUST00000071898 Ak7Q9D2H2 614 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms