RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR52, Length 92 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR52snR52 KSH1Q8TGJ3 72 aa-4.21□□□□□ -3.08
snR52snR52 PDR11P40550 1411 aa-4.21□□□□□ -3.08
snR52snR52 YIL156W-BQ2V2P4 73 aa-4.22□□□□□ -3.08
snR52snR52 YLR146W-AQ2V2P1 62 aa-4.24□□□□□ -3.09
snR52snR52 YOR343CQ12484 108 aa-4.25□□□□□ -3.09
snR52snR52 UTP10P42945 1769 aaKnown RBP-4.26□□□□□ -3.09
snR52snR52 YGL258W-AQ3E740 77 aa-4.26□□□□□ -3.09
snR52snR52 YOR394C-AQ8TGJ0 55 aa-4.26□□□□□ -3.09
snR52snR52 YDR042CQ03205 200 aa-4.28□□□□□ -3.09
snR52snR52 YDR524C-BQ3E6R4 66 aa-4.3□□□□□ -3.1
snR52snR52 COA2Q3E823 68 aa-4.3□□□□□ -3.1
snR52snR52 YDR119W-AQ2V2P9 66 aa-4.31□□□□□ -3.1
snR52snR52 GEA1P47102 1408 aaPredicted RBP-4.31□□□□□ -3.1
snR52snR52 SCP1Q08873 200 aa-4.33□□□□□ -3.1
snR52snR52 YBR200W-AQ3E755 54 aa-4.34□□□□□ -3.1
snR52snR52 APC1P53886 1748 aa-4.35□□□□□ -3.11
snR52snR52 SUS1Q6WNK7 96 aa-4.36□□□□□ -3.11
snR52snR52 RPA190P10964 1664 aaKnown RBP-4.36□□□□□ -3.11
snR52snR52 MSL1P40567 111 aaPredicted RBP-4.38□□□□□ -3.11
snR52snR52 TY3B-GQ99315 1547 aa-4.38□□□□□ -3.11
snR52snR52 YOR304C-AO14468 76 aa-4.39□□□□□ -3.11
snR52snR52 KOG1P38873 1557 aa-4.4□□□□□ -3.11
snR52snR52 YDL022C-AP0C5L6 82 aa-4.4□□□□□ -3.11
snR52snR52 YOR072W-BQ3E832 53 aa-4.42□□□□□ -3.12
snR52snR52 GDB1Q06625 1536 aa-4.43□□□□□ -3.12
snR52snR52 YOR105WQ08504 108 aa-4.44□□□□□ -3.12
snR52snR52 REV3P14284 1504 aa-4.45□□□□□ -3.12
snR52snR52 YOR011W-AQ3E807 68 aa-4.45□□□□□ -3.12
snR52snR52 YBL039W-BP0C268 59 aa-4.5□□□□□ -3.13
snR52snR52 RPS27BP38711 82 aa-4.5□□□□□ -3.13
snR52snR52 YPL225WQ08971 146 aaKnown RBP-4.5□□□□□ -3.13
snR52snR52 GEA2P39993 1459 aaKnown RBP-4.5□□□□□ -3.13
snR52snR52 RPS12P48589 143 aaKnown RBP-4.51□□□□□ -3.13
snR52snR52 ATP17Q06405 101 aa-4.52□□□□□ -3.13
snR52snR52 TSC11P40061 1430 aa-4.53□□□□□ -3.13
snR52snR52 YOR314WQ12506 109 aa-4.55□□□□□ -3.14
snR52snR52 VPS15P22219 1454 aa-4.56□□□□□ -3.14
snR52snR52 YGR146C-AQ8TGT9 53 aa-4.58□□□□□ -3.14
snR52snR52 HAP1P0CE41 1502 aa-4.58□□□□□ -3.14
snR52snR52 SWR1Q05471 1514 aa-4.6□□□□□ -3.15
snR52snR52 SIN3P22579 1536 aa-4.62□□□□□ -3.15
snR52snR52 YER137CP40083 148 aaKnown RBP-4.65□□□□□ -3.15
snR52snR52 CUP1-1P0CX80 61 aa-4.69□□□□□ -3.16
snR52snR52 CUP1-2P0CX81 61 aa-4.69□□□□□ -3.16
snR52snR52 YOR032W-AQ8TGS1 66 aa-4.7□□□□□ -3.16
snR52snR52 YKL065W-AQ2V2P2 73 aa-4.71□□□□□ -3.16
snR52snR52 PDR10P51533 1564 aa-4.71□□□□□ -3.16
snR52snR52 FIG2P25653 1609 aa-4.75□□□□□ -3.17
snR52snR52 YMR082CQ04276 118 aa-4.75□□□□□ -3.17
snR52snR52 Q0017Q9ZZX8 53 aa-4.77□□□□□ -3.17
snR52snR52 YPR145C-AQ2V2P0 78 aa-4.78□□□□□ -3.17
snR52snR52 YMR175W-AQ3E766 64 aa-4.8□□□□□ -3.18
snR52snR52 YCL001W-BQ96VH2 84 aa-4.8□□□□□ -3.18
snR52snR52 QCR9P22289 66 aa-4.86□□□□□ -3.19
snR52snR52 NUM1Q00402 2748 aa-4.87□□□□□ -3.19
snR52snR52 YBR230W-AQ3E762 66 aa-4.88□□□□□ -3.19
snR52snR52 YGR121W-AQ3E816 71 aa-4.89□□□□□ -3.19
snR52snR52 YOR192C-CQ3E736 78 aa-4.91□□□□□ -3.2
snR52snR52 YGR035W-AQ45U48 73 aa-4.91□□□□□ -3.2
snR52snR52 SSS1P35179 80 aa-4.92□□□□□ -3.2
snR52snR52 CSF1Q12150 2958 aa-4.94□□□□□ -3.2
snR52snR52 PAU7P39545 55 aa-4.97□□□□□ -3.21
snR52snR52 FKS3Q04952 1785 aa-4.97□□□□□ -3.21
snR52snR52 YGL194C-AQ2V2P6 80 aa-5.01□□□□□ -3.21
snR52snR52 SPI1P40092 148 aa-5.02□□□□□ -3.21
snR52snR52 SWM2P40342 146 aa-5.03□□□□□ -3.21
snR52snR52 HUB1Q6Q546 73 aa-5.04□□□□□ -3.22
snR52snR52 TRA1P38811 3744 aa-5.05□□□□□ -3.22
snR52snR52 MMS22Q06164 1454 aa-5.06□□□□□ -3.22
snR52snR52 TIM12P32830 109 aa-5.1□□□□□ -3.23
snR52snR52 YSP2Q06681 1438 aa-5.11□□□□□ -3.23
snR52snR52 THO2P53552 1597 aaKnown RBP-5.12□□□□□ -3.23
snR52snR52 CWP2P43497 92 aa-5.13□□□□□ -3.23
snR52snR52 YCR075W-AQ3E830 75 aa-5.15□□□□□ -3.23
snR52snR52 MDS3P53094 1487 aa-5.15□□□□□ -3.23
snR52snR52 DNF1P32660 1571 aa-5.16□□□□□ -3.23
snR52snR52 YML054C-AQ3E809 52 aa-5.16□□□□□ -3.24
snR52snR52 ZEO1Q08245 113 aa-5.18□□□□□ -3.24
snR52snR52 YLR157W-DP0CE99 70 aa-5.28□□□□□ -3.25
snR52snR52 MLP1Q02455 1875 aaKnown RBP-5.29□□□□□ -3.26
snR52snR52 SNQ2P32568 1501 aaKnown RBP-5.29□□□□□ -3.26
snR52snR52 LTE1P07866 1435 aa-5.3□□□□□ -3.26
snR52snR52 RPS30AP0CX33 63 aaKnown RBP-5.3□□□□□ -3.26
snR52snR52 RPS30BP0CX34 63 aaKnown RBP-5.3□□□□□ -3.26
snR52snR52 ERI1P62651 68 aaKnown RBP-5.32□□□□□ -3.26
snR52snR52 PDR12Q02785 1511 aa-5.33□□□□□ -3.26
snR52snR52 ARO1P08566 1588 aaKnown RBP-5.33□□□□□ -3.26
snR52snR52 IRA1P18963 3092 aa-5.35□□□□□ -3.27
snR52snR52 PDR15Q04182 1529 aaKnown RBP-5.38□□□□□ -3.27
snR52snR52 RPL29P05747 59 aaPredicted RBP-5.39□□□□□ -3.27
snR52snR52 IQG1Q12280 1495 aa-5.4□□□□□ -3.27
snR52snR52 YDR034C-AP0C289 58 aa-5.42□□□□□ -3.28
snR52snR52 DNF2Q12675 1612 aa-5.43□□□□□ -3.28
snR52snR52 RRP5Q05022 1729 aaKnown RBP-5.47□□□□□ -3.29
snR52snR52 YOL131WQ08270 108 aa-5.47□□□□□ -3.29
snR52snR52 IRA2P19158 3079 aa-5.49□□□□□ -3.29
snR52snR52 YOR093CQ12275 1648 aa-5.51□□□□□ -3.29
snR52snR52 TY1B-DR4Q07793 1604 aa-5.52□□□□□ -3.29
snR52snR52 RPO31P04051 1460 aa-5.59□□□□□ -3.3
snR52snR52 YOR316C-AQ3E806 69 aa-5.6□□□□□ -3.31
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms