RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 HMRA1P0CY11 126 aa-4.56□□□□□ -3.14
snR47snR47 TY3B-GQ99315 1547 aa-4.57□□□□□ -3.14
snR47snR47 YLR146W-AQ2V2P1 62 aa-4.59□□□□□ -3.14
snR47snR47 NOP10Q6Q547 58 aaPredicted RBP-4.59□□□□□ -3.14
snR47snR47 CSF1Q12150 2958 aa-4.61□□□□□ -3.15
snR47snR47 KOG1P38873 1557 aa-4.64□□□□□ -3.15
snR47snR47 VMA7P39111 118 aa-4.64□□□□□ -3.15
snR47snR47 YBR200W-AQ3E755 54 aa-4.64□□□□□ -3.15
snR47snR47 QCR6P00127 147 aa-4.65□□□□□ -3.15
snR47snR47 YDR042CQ03205 200 aa-4.65□□□□□ -3.15
snR47snR47 ATP17Q06405 101 aa-4.65□□□□□ -3.15
snR47snR47 VPS15P22219 1454 aa-4.65□□□□□ -3.15
snR47snR47 PDR11P40550 1411 aa-4.67□□□□□ -3.16
snR47snR47 YIL156W-BQ2V2P4 73 aa-4.68□□□□□ -3.16
snR47snR47 RRT15Q3E811 62 aa-4.68□□□□□ -3.16
snR47snR47 YMR090WQ04304 227 aaKnown RBP-4.69□□□□□ -3.16
snR47snR47 Q0017Q9ZZX8 53 aa-4.69□□□□□ -3.16
snR47snR47 FIG2P25653 1609 aa-4.69□□□□□ -3.16
snR47snR47 MHF2Q3E829 80 aa-4.7□□□□□ -3.16
snR47snR47 POL1P13382 1468 aa-4.7□□□□□ -3.16
snR47snR47 RPS27BP38711 82 aa-4.71□□□□□ -3.16
snR47snR47 DYN2Q02647 92 aa-4.71□□□□□ -3.16
snR47snR47 YOR011W-AQ3E807 68 aa-4.73□□□□□ -3.17
snR47snR47 PDR10P51533 1564 aa-4.75□□□□□ -3.17
snR47snR47 YGR146C-AQ8TGT9 53 aa-4.76□□□□□ -3.17
snR47snR47 YPL225WQ08971 146 aaKnown RBP-4.78□□□□□ -3.17
snR47snR47 CHD1P32657 1468 aa-4.78□□□□□ -3.17
snR47snR47 TRA1P38811 3744 aa-4.78□□□□□ -3.17
snR47snR47 YBL039W-BP0C268 59 aa-4.8□□□□□ -3.18
snR47snR47 WIP1Q2V2P8 89 aa-4.8□□□□□ -3.18
snR47snR47 YDL022C-AP0C5L6 82 aa-4.81□□□□□ -3.18
snR47snR47 RPA190P10964 1664 aaKnown RBP-4.81□□□□□ -3.18
snR47snR47 HAP1P0CE41 1502 aa-4.82□□□□□ -3.18
snR47snR47 YER039C-AP0CD97 72 aa-4.82□□□□□ -3.18
snR47snR47 KSH1Q8TGJ3 72 aa-4.82□□□□□ -3.18
snR47snR47 YOR192C-CQ3E736 78 aa-4.85□□□□□ -3.19
snR47snR47 SPP41P38904 1435 aa-4.89□□□□□ -3.19
snR47snR47 YOR105WQ08504 108 aa-4.9□□□□□ -3.19
snR47snR47 GEA1P47102 1408 aaPredicted RBP-4.91□□□□□ -3.2
snR47snR47 SUS1Q6WNK7 96 aa-4.92□□□□□ -3.2
snR47snR47 GDB1Q06625 1536 aa-4.92□□□□□ -3.2
snR47snR47 YOR314WQ12506 109 aa-4.93□□□□□ -3.2
snR47snR47 FKS3Q04952 1785 aa-4.93□□□□□ -3.2
snR47snR47 IRA1P18963 3092 aa-4.97□□□□□ -3.2
snR47snR47 MSL1P40567 111 aaPredicted RBP-4.98□□□□□ -3.21
snR47snR47 SIN3P22579 1536 aa-5□□□□□ -3.21
snR47snR47 IRA2P19158 3079 aa-5.04□□□□□ -3.22
snR47snR47 YML054C-AQ3E809 52 aa-5.04□□□□□ -3.22
snR47snR47 REV3P14284 1504 aa-5.04□□□□□ -3.22
snR47snR47 YMR082CQ04276 118 aa-5.05□□□□□ -3.22
snR47snR47 THO2P53552 1597 aaKnown RBP-5.05□□□□□ -3.22
snR47snR47 YBR230W-AQ3E762 66 aa-5.06□□□□□ -3.22
snR47snR47 YOR032W-AQ8TGS1 66 aa-5.08□□□□□ -3.22
snR47snR47 GEA2P39993 1459 aaKnown RBP-5.1□□□□□ -3.23
snR47snR47 SWR1Q05471 1514 aa-5.1□□□□□ -3.23
snR47snR47 YKL065W-AQ2V2P2 73 aa-5.13□□□□□ -3.23
snR47snR47 SPI1P40092 148 aa-5.14□□□□□ -3.23
snR47snR47 YOR304C-AO14468 76 aa-5.16□□□□□ -3.24
snR47snR47 TSC11P40061 1430 aa-5.19□□□□□ -3.24
snR47snR47 RPS12P48589 143 aaKnown RBP-5.21□□□□□ -3.24
snR47snR47 DNF1P32660 1571 aa-5.21□□□□□ -3.24
snR47snR47 YGL194C-AQ2V2P6 80 aa-5.22□□□□□ -3.25
snR47snR47 TIM12P32830 109 aa-5.26□□□□□ -3.25
snR47snR47 SSS1P35179 80 aa-5.26□□□□□ -3.25
snR47snR47 YPR145C-AQ2V2P0 78 aa-5.26□□□□□ -3.25
snR47snR47 QCR9P22289 66 aa-5.27□□□□□ -3.25
snR47snR47 YSP2Q06681 1438 aa-5.27□□□□□ -3.25
snR47snR47 YMR175W-AQ3E766 64 aa-5.29□□□□□ -3.26
snR47snR47 YGR035W-AQ45U48 73 aa-5.29□□□□□ -3.26
snR47snR47 YGR121W-AQ3E816 71 aa-5.3□□□□□ -3.26
snR47snR47 PAU7P39545 55 aa-5.32□□□□□ -3.26
snR47snR47 HUB1Q6Q546 73 aa-5.32□□□□□ -3.26
snR47snR47 RPL29P05747 59 aaPredicted RBP-5.33□□□□□ -3.26
snR47snR47 YMR105W-AQ8TGS8 64 aa-5.34□□□□□ -3.26
snR47snR47 YDR034C-AP0C289 58 aa-5.38□□□□□ -3.27
snR47snR47 YCL001W-BQ96VH2 84 aa-5.38□□□□□ -3.27
snR47snR47 SNQ2P32568 1501 aaKnown RBP-5.38□□□□□ -3.27
snR47snR47 YER137CP40083 148 aaKnown RBP-5.42□□□□□ -3.28
snR47snR47 SWM2P40342 146 aa-5.42□□□□□ -3.28
snR47snR47 PDR12Q02785 1511 aa-5.45□□□□□ -3.28
snR47snR47 MDS3P53094 1487 aa-5.45□□□□□ -3.28
snR47snR47 MMS22Q06164 1454 aa-5.48□□□□□ -3.29
snR47snR47 TY1B-DR4Q07793 1604 aa-5.51□□□□□ -3.29
snR47snR47 MLP1Q02455 1875 aaKnown RBP-5.51□□□□□ -3.29
snR47snR47 YOR093CQ12275 1648 aa-5.52□□□□□ -3.29
snR47snR47 PDR15Q04182 1529 aaKnown RBP-5.52□□□□□ -3.29
snR47snR47 YLR157W-DP0CE99 70 aa-5.52□□□□□ -3.29
snR47snR47 ARO1P08566 1588 aaKnown RBP-5.55□□□□□ -3.3
snR47snR47 RRP5Q05022 1729 aaKnown RBP-5.57□□□□□ -3.3
snR47snR47 RPS30AP0CX33 63 aaKnown RBP-5.59□□□□□ -3.3
snR47snR47 RPS30BP0CX34 63 aaKnown RBP-5.59□□□□□ -3.3
snR47snR47 DNF2Q12675 1612 aa-5.6□□□□□ -3.31
snR47snR47 FLO1P32768 1537 aa-5.61□□□□□ -3.31
snR47snR47 YOR316C-AQ3E806 69 aa-5.61□□□□□ -3.31
snR47snR47 VPS13Q07878 3144 aa-5.64□□□□□ -3.31
snR47snR47 CWP2P43497 92 aa-5.65□□□□□ -3.31
snR47snR47 ERI1P62651 68 aaKnown RBP-5.65□□□□□ -3.31
snR47snR47 IQG1Q12280 1495 aa-5.67□□□□□ -3.32
snR47snR47 RPO31P04051 1460 aa-5.7□□□□□ -3.32
snR47snR47 ESP1Q03018 1630 aa-5.7□□□□□ -3.32
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms