RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W RPL38P49167 78 aaKnown RBP2.59□□□□□ -1.99
SCD6YPR129W YCL048W-AQ2V2Q2 79 aa2.59□□□□□ -1.99
SCD6YPR129W YOR034C-AQ3E735 80 aa2.59□□□□□ -1.99
SCD6YPR129W YOR008C-AQ3E7B9 74 aa2.59□□□□□ -1.99
SCD6YPR129W YNL042W-BQ3E7Z2 85 aa2.59□□□□□ -1.99
SCD6YPR129W YCR001WP25347 104 aa2.58□□□□□ -2
SCD6YPR129W YBR219CP38317 127 aa2.58□□□□□ -2
SCD6YPR129W IGD1P43598 195 aa2.58□□□□□ -2
SCD6YPR129W YNL190WP53872 204 aa2.58□□□□□ -2
SCD6YPR129W API2Q04413 109 aa2.58□□□□□ -2
SCD6YPR129W RPS11AP0CX47 156 aaKnown RBP2.57□□□□□ -2
SCD6YPR129W RPS11BP0CX48 156 aaKnown RBP2.57□□□□□ -2
SCD6YPR129W YBR027CP38220 110 aa2.57□□□□□ -2
SCD6YPR129W MRPS12P53732 153 aa2.57□□□□□ -2
SCD6YPR129W ATP17Q06405 101 aa2.57□□□□□ -2
SCD6YPR129W CCW12Q12127 133 aa2.57□□□□□ -2
SCD6YPR129W ATP18P81450 59 aa2.56□□□□□ -2
SCD6YPR129W FIG2P25653 1609 aa2.56□□□□□ -2
SCD6YPR129W YSF3P0C074 85 aaPredicted RBP2.55□□□□□ -2
SCD6YPR129W YCR022CP25620 114 aa2.55□□□□□ -2
SCD6YPR129W YIL102CP40488 101 aa2.55□□□□□ -2
SCD6YPR129W YGL258W-AQ3E740 77 aa2.55□□□□□ -2
SCD6YPR129W SDH6Q3E785 79 aa2.55□□□□□ -2
SCD6YPR129W BPH1P25356 2167 aa2.54□□□□□ -2
SCD6YPR129W YLR157W-DP0CE99 70 aa2.53□□□□□ -2
SCD6YPR129W YJR085CP47131 105 aaKnown RBP2.53□□□□□ -2
SCD6YPR129W YMR001C-AQ8TGS9 76 aa2.53□□□□□ -2
SCD6YPR129W YEL014CP39999 101 aa2.52□□□□□ -2.01
SCD6YPR129W YMR141CP40211 102 aa2.52□□□□□ -2.01
SCD6YPR129W YFL067WP43537 175 aa2.52□□□□□ -2.01
SCD6YPR129W YNL122CP53921 115 aaPredicted RBP2.52□□□□□ -2.01
SCD6YPR129W SGF11Q03067 99 aa2.52□□□□□ -2.01
SCD6YPR129W ECM19Q06011 112 aa2.52□□□□□ -2.01
SCD6YPR129W CMC4Q3E7A9 73 aa2.52□□□□□ -2.01
SCD6YPR129W YLR342W-AQ3E810 57 aa2.52□□□□□ -2.01
SCD6YPR129W AQY2P0CD90 149 aa2.51□□□□□ -2.01
SCD6YPR129W YGL014C-AP0C5N1 53 aa2.5□□□□□ -2.01
SCD6YPR129W YHR032W-AP0C5N6 59 aa2.5□□□□□ -2.01
SCD6YPR129W YDR115WQ04598 105 aa2.5□□□□□ -2.01
SCD6YPR129W YPR010C-AA5Z2X5 72 aa2.49□□□□□ -2.01
SCD6YPR129W YFR009W-AP0C5M9 85 aa2.48□□□□□ -2.01
SCD6YPR129W FPR1P20081 114 aaKnown RBP2.48□□□□□ -2.01
SCD6YPR129W RPL33BP41056 107 aaKnown RBP2.48□□□□□ -2.01
SCD6YPR129W COX8P04039 78 aa2.47□□□□□ -2.01
SCD6YPR129W YOL013W-AP0C272 63 aaPredicted RBP2.47□□□□□ -2.01
SCD6YPR129W YDR114CQ04597 100 aa2.47□□□□□ -2.01
SCD6YPR129W LCL2Q08045 131 aa2.47□□□□□ -2.01
SCD6YPR129W BRR2P32639 2163 aaKnown RBP2.47□□□□□ -2.01
SCD6YPR129W YEL008WP40001 126 aa2.46□□□□□ -2.02
SCD6YPR129W YJR146WP47174 117 aa2.46□□□□□ -2.02
SCD6YPR129W YPR195CQ06594 109 aa2.46□□□□□ -2.02
SCD6YPR129W FAB1P34756 2278 aa2.45□□□□□ -2.02
SCD6YPR129W YGL041C-BQ3E750 60 aa2.45□□□□□ -2.02
SCD6YPR129W YOL097W-AQ3E7Y9 61 aa2.45□□□□□ -2.02
SCD6YPR129W FAS1P07149 2051 aaKnown RBP2.45□□□□□ -2.02
SCD6YPR129W YDR210WQ03482 75 aa2.44□□□□□ -2.02
SCD6YPR129W YMR122W-AQ3E842 84 aa2.44□□□□□ -2.02
SCD6YPR129W YAL067W-AQ8TGK6 75 aa2.44□□□□□ -2.02
SCD6YPR129W YBL039W-BP0C268 59 aa2.42□□□□□ -2.02
SCD6YPR129W YBR201C-AQ2V2Q3 67 aa2.42□□□□□ -2.02
SCD6YPR129W YLL006W-AQ3E814 58 aa2.42□□□□□ -2.02
SCD6YPR129W Q0032Q9ZZX7 96 aa2.42□□□□□ -2.02
SCD6YPR129W YGR025WP53216 100 aa2.41□□□□□ -2.02
SCD6YPR129W NCE101Q02820 53 aa2.41□□□□□ -2.02
SCD6YPR129W RPL33AP05744 107 aaKnown RBP2.4□□□□□ -2.03
SCD6YPR129W YJL027CP47063 138 aaPredicted RBP2.4□□□□□ -2.03
SCD6YPR129W YOL085CQ99345 113 aa2.4□□□□□ -2.03
SCD6YPR129W YHR213W-BQ8TGK1 99 aa2.39□□□□□ -2.03
SCD6YPR129W MVB12P42939 101 aa2.38□□□□□ -2.03
SCD6YPR129W YOR011W-AQ3E807 68 aa2.38□□□□□ -2.03
SCD6YPR129W YER084WP40057 128 aa2.37□□□□□ -2.03
SCD6YPR129W YHR007C-AQ07074 71 aa2.37□□□□□ -2.03
SCD6YPR129W VAM10Q08474 114 aa2.37□□□□□ -2.03
SCD6YPR129W YJL133C-AQ3E7A3 74 aa2.37□□□□□ -2.03
SCD6YPR129W SIP18P50263 79 aa2.36□□□□□ -2.03
SCD6YPR129W YBR200W-AQ3E755 54 aa2.36□□□□□ -2.03
SCD6YPR129W YGR240C-AQ3E786 66 aa2.36□□□□□ -2.03
SCD6YPR129W YLR255CO13574 117 aa2.35□□□□□ -2.03
SCD6YPR129W AUA1P32450 94 aa2.35□□□□□ -2.03
SCD6YPR129W RPL29P05747 59 aaPredicted RBP2.34□□□□□ -2.03
SCD6YPR129W BLM10P43583 2143 aa2.34□□□□□ -2.03
SCD6YPR129W YJL144WP47009 104 aa2.34□□□□□ -2.03
SCD6YPR129W YLR307C-AQ3E825 87 aa2.34□□□□□ -2.03
SCD6YPR129W YBR230W-AQ3E762 66 aa2.33□□□□□ -2.04
SCD6YPR129W TAR1Q8TGM6 124 aa2.33□□□□□ -2.04
SCD6YPR129W YAR064WP39563 99 aa2.32□□□□□ -2.04
SCD6YPR129W YIL086CP40503 102 aa2.32□□□□□ -2.04
SCD6YPR129W YOR072WQ08486 104 aa2.32□□□□□ -2.04
SCD6YPR129W COX7P10174 60 aa2.31□□□□□ -2.04
SCD6YPR129W PMP3P87284 55 aa2.31□□□□□ -2.04
SCD6YPR129W DDR2P89113 61 aa2.3□□□□□ -2.04
SCD6YPR129W YJL127C-BQ3E828 52 aa2.3□□□□□ -2.04
SCD6YPR129W YOR394C-AQ8TGJ0 55 aa2.3□□□□□ -2.04
SCD6YPR129W BEM2P39960 2167 aaKnown RBP2.3□□□□□ -2.04
SCD6YPR129W SEN1Q00416 2231 aaKnown RBP2.3□□□□□ -2.04
SCD6YPR129W YCL042WP25572 119 aa2.29□□□□□ -2.04
SCD6YPR129W SEC16P48415 2195 aaKnown RBP2.28□□□□□ -2.04
SCD6YPR129W YJR128WP47162 119 aa2.27□□□□□ -2.05
SCD6YPR129W OLI1P61829 76 aa2.27□□□□□ -2.05
SCD6YPR129W YJL009WP47078 108 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms