RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C COX12Q01519 83 aa-0.66□□□□□ -2.52
NIP100YPL174C YLR363W-AQ3E747 85 aa-0.66□□□□□ -2.52
NIP100YPL174C SNF11P38956 169 aa-0.67□□□□□ -2.52
NIP100YPL174C ERI1P62651 68 aaKnown RBP-0.67□□□□□ -2.52
NIP100YPL174C GPI19Q04082 140 aa-0.67□□□□□ -2.52
NIP100YPL174C YPL038W-AQ3E7B4 63 aa-0.67□□□□□ -2.52
NIP100YPL174C YDR034C-AP0C289 58 aa-0.67□□□□□ -2.52
NIP100YPL174C YCR101CP25607 182 aa-0.67□□□□□ -2.52
NIP100YPL174C YGR042WP53227 271 aa-0.67□□□□□ -2.52
NIP100YPL174C YDR182W-AQ3E796 67 aa-0.67□□□□□ -2.52
NIP100YPL174C PAU1P0CE88 120 aa-0.68□□□□□ -2.52
NIP100YPL174C PAU14P0CE89 120 aa-0.68□□□□□ -2.52
NIP100YPL174C UBC4P15731 148 aa-0.68□□□□□ -2.52
NIP100YPL174C BUD23P25627 275 aaPredicted RBP-0.68□□□□□ -2.52
NIP100YPL174C ACP1P32463 125 aa-0.68□□□□□ -2.52
NIP100YPL174C PAU16P35994 123 aa-0.68□□□□□ -2.52
NIP100YPL174C YBL071CP38185 102 aa-0.68□□□□□ -2.52
NIP100YPL174C ICY1Q04329 127 aa-0.68□□□□□ -2.52
NIP100YPL174C MIX14Q04341 121 aa-0.68□□□□□ -2.52
NIP100YPL174C YMR103CQ04436 120 aa-0.68□□□□□ -2.52
NIP100YPL174C SDH6Q3E785 79 aa-0.68□□□□□ -2.52
NIP100YPL174C TOS6P48560 102 aa-0.68□□□□□ -2.52
NIP100YPL174C RPL22BP56628 122 aaKnown RBP-0.68□□□□□ -2.52
NIP100YPL174C APS2Q00381 147 aa-0.68□□□□□ -2.52
NIP100YPL174C YGL258W-AQ3E740 77 aa-0.68□□□□□ -2.52
NIP100YPL174C SNN1P48232 102 aa-0.68□□□□□ -2.52
NIP100YPL174C YGR025WP53216 100 aa-0.68□□□□□ -2.52
NIP100YPL174C NHP10Q03435 203 aa-0.68□□□□□ -2.52
NIP100YPL174C YPR108W-AQ3E7B3 70 aa-0.68□□□□□ -2.52
NIP100YPL174C RPS20P38701 121 aaKnown RBP-0.69□□□□□ -2.52
NIP100YPL174C EMC5P40540 141 aa-0.69□□□□□ -2.52
NIP100YPL174C YMR122W-AQ3E842 84 aa-0.69□□□□□ -2.52
NIP100YPL174C PDX3P38075 228 aaKnown RBP-0.69□□□□□ -2.52
NIP100YPL174C HUR1P45820 110 aa-0.69□□□□□ -2.52
NIP100YPL174C PAU23Q07987 124 aa-0.69□□□□□ -2.52
NIP100YPL174C PAU17Q12370 124 aa-0.69□□□□□ -2.52
NIP100YPL174C RPS27AP35997 82 aaKnown RBP-0.7□□□□□ -2.52
NIP100YPL174C BSC4P53841 131 aa-0.7□□□□□ -2.52
NIP100YPL174C YOL118CQ08259 102 aa-0.7□□□□□ -2.52
NIP100YPL174C YCR095W-AQ3E787 52 aa-0.7□□□□□ -2.52
NIP100YPL174C YNL042W-BQ3E7Z2 85 aa-0.7□□□□□ -2.52
NIP100YPL174C RRT15Q3E811 62 aa-0.7□□□□□ -2.52
NIP100YPL174C YOR072W-BQ3E832 53 aa-0.7□□□□□ -2.52
NIP100YPL174C YHR214C-DP0CX93 97 aa-0.7□□□□□ -2.52
NIP100YPL174C SFT1P43682 97 aa-0.7□□□□□ -2.52
NIP100YPL174C SNA2P56508 79 aa-0.7□□□□□ -2.52
NIP100YPL174C ATP18P81450 59 aa-0.7□□□□□ -2.52
NIP100YPL174C TLG1Q03322 224 aa-0.7□□□□□ -2.52
NIP100YPL174C YLR361C-AQ3E795 98 aa-0.7□□□□□ -2.52
NIP100YPL174C SPC24Q04477 213 aa-0.71□□□□□ -2.52
NIP100YPL174C HOR7Q05827 59 aa-0.71□□□□□ -2.52
NIP100YPL174C YAL065CO13511 128 aa-0.71□□□□□ -2.52
NIP100YPL174C POP7P38291 140 aa-0.71□□□□□ -2.52
NIP100YPL174C YHL005CP38752 130 aa-0.71□□□□□ -2.52
NIP100YPL174C TDA2P40045 126 aa-0.71□□□□□ -2.52
NIP100YPL174C YIL156W-BQ2V2P4 73 aa-0.71□□□□□ -2.52
NIP100YPL174C FYV7Q12247 151 aa-0.72□□□□□ -2.52
NIP100YPL174C YKL018C-AQ3E7A7 99 aa-0.72□□□□□ -2.52
NIP100YPL174C YOR008C-AQ3E7B9 74 aa-0.72□□□□□ -2.52
NIP100YPL174C YKL068W-AQ3E826 78 aa-0.72□□□□□ -2.52
NIP100YPL174C YCR085WP25650 117 aa-0.72□□□□□ -2.53
NIP100YPL174C FPR2P32472 135 aa-0.72□□□□□ -2.53
NIP100YPL174C GIM4P40005 111 aaKnown RBP-0.72□□□□□ -2.53
NIP100YPL174C RSM19P53733 91 aaPredicted RBP-0.72□□□□□ -2.53
NIP100YPL174C YLR146W-AQ2V2P1 62 aa-0.72□□□□□ -2.53
NIP100YPL174C TOM6P33448 61 aa-0.73□□□□□ -2.53
NIP100YPL174C YAR029WP39549 74 aa-0.73□□□□□ -2.53
NIP100YPL174C YGL204CP53089 101 aa-0.73□□□□□ -2.53
NIP100YPL174C YGR121W-AQ3E816 71 aa-0.73□□□□□ -2.53
NIP100YPL174C SAE3P89114 91 aa-0.73□□□□□ -2.53
NIP100YPL174C SPC2Q04969 178 aa-0.73□□□□□ -2.53
NIP100YPL174C FRQ1Q06389 190 aa-0.73□□□□□ -2.53
NIP100YPL174C NHP2P32495 156 aaPredicted RBP-0.74□□□□□ -2.53
NIP100YPL174C ATP17Q06405 101 aa-0.74□□□□□ -2.53
NIP100YPL174C DAD1Q12248 94 aa-0.74□□□□□ -2.53
NIP100YPL174C YLR365WQ7LIF2 110 aa-0.74□□□□□ -2.53
NIP100YPL174C YDL022C-AP0C5L6 82 aa-0.74□□□□□ -2.53
NIP100YPL174C YFR010W-AP0C5N0 62 aa-0.74□□□□□ -2.53
NIP100YPL174C YCR099CP25657 155 aa-0.74□□□□□ -2.53
NIP100YPL174C YBR292CP38357 123 aa-0.74□□□□□ -2.53
NIP100YPL174C RPS27BP38711 82 aa-0.75□□□□□ -2.53
NIP100YPL174C GTT1P40582 234 aa-0.75□□□□□ -2.53
NIP100YPL174C NOP10Q6Q547 58 aaPredicted RBP-0.75□□□□□ -2.53
NIP100YPL174C YHR138CP38841 114 aaPredicted RBP-0.75□□□□□ -2.53
NIP100YPL174C YDR042CQ03205 200 aa-0.75□□□□□ -2.53
NIP100YPL174C SCP1Q08873 200 aa-0.76□□□□□ -2.53
NIP100YPL174C GNA1P43577 159 aaPredicted RBP-0.76□□□□□ -2.53
NIP100YPL174C WIP1Q2V2P8 89 aa-0.76□□□□□ -2.53
NIP100YPL174C YDR119W-AQ2V2P9 66 aa-0.76□□□□□ -2.53
NIP100YPL174C RPS30AP0CX33 63 aaKnown RBP-0.77□□□□□ -2.53
NIP100YPL174C RPS30BP0CX34 63 aaKnown RBP-0.77□□□□□ -2.53
NIP100YPL174C SRB6P32570 121 aa-0.77□□□□□ -2.53
NIP100YPL174C HMRA1P0CY11 126 aa-0.77□□□□□ -2.53
NIP100YPL174C YBR032WP38223 100 aa-0.77□□□□□ -2.53
NIP100YPL174C SMD2Q06217 110 aaKnown RBP-0.78□□□□□ -2.53
NIP100YPL174C YPR145C-AQ2V2P0 78 aa-0.78□□□□□ -2.53
NIP100YPL174C YBR200W-AQ3E755 54 aa-0.78□□□□□ -2.53
NIP100YPL174C YOR394C-AQ8TGJ0 55 aa-0.78□□□□□ -2.53
NIP100YPL174C LHP1P33399 275 aaKnown RBP-0.78□□□□□ -2.53
NIP100YPL174C YGR146C-AQ8TGT9 53 aa-0.78□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms