RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C SNF2P22082 1703 aa2.03□□□□□ -2.08
TOP1YOL006C QCR9P22289 66 aa2.03□□□□□ -2.08
TOP1YOL006C VTH1P40438 1549 aa2.03□□□□□ -2.08
TOP1YOL006C VTH2P40890 1549 aa2.03□□□□□ -2.08
TOP1YOL006C RPS11AP0CX47 156 aaKnown RBP2.03□□□□□ -2.08
TOP1YOL006C RPS11BP0CX48 156 aaKnown RBP2.03□□□□□ -2.08
TOP1YOL006C YIL102C-AQ2V2P5 75 aa2.03□□□□□ -2.08
TOP1YOL006C URB1P34241 1764 aaKnown RBP2.03□□□□□ -2.08
TOP1YOL006C APC1P53886 1748 aa2.03□□□□□ -2.08
TOP1YOL006C UTP10P42945 1769 aaKnown RBP2.02□□□□□ -2.09
TOP1YOL006C MLP2P40457 1679 aa2.02□□□□□ -2.09
TOP1YOL006C YHR173CP38864 112 aa2.02□□□□□ -2.09
TOP1YOL006C YIL156W-BQ2V2P4 73 aa2.02□□□□□ -2.09
TOP1YOL006C MOT1P32333 1867 aa2.01□□□□□ -2.09
TOP1YOL006C RIM15P43565 1770 aa2.01□□□□□ -2.09
TOP1YOL006C YJL009WP47078 108 aa2.01□□□□□ -2.09
TOP1YOL006C YDL012CQ12489 107 aa2.01□□□□□ -2.09
TOP1YOL006C ACC1Q00955 2233 aaKnown RBP2.01□□□□□ -2.09
TOP1YOL006C PAU20Q08322 120 aa2.01□□□□□ -2.09
TOP1YOL006C NOP10Q6Q547 58 aaPredicted RBP2.01□□□□□ -2.09
TOP1YOL006C FPR2P32472 135 aa2□□□□□ -2.09
TOP1YOL006C UTP20P35194 2493 aaKnown RBP2□□□□□ -2.09
TOP1YOL006C BRR2P32639 2163 aaKnown RBP2□□□□□ -2.09
TOP1YOL006C YGR035W-AQ45U48 73 aa2□□□□□ -2.09
TOP1YOL006C SPI1P40092 148 aa1.99□□□□□ -2.09
TOP1YOL006C YNL122CP53921 115 aaPredicted RBP1.99□□□□□ -2.09
TOP1YOL006C YLR255CO13574 117 aa1.98□□□□□ -2.09
TOP1YOL006C NUP188P52593 1655 aaKnown RBP1.97□□□□□ -2.09
TOP1YOL006C ERI1P62651 68 aaKnown RBP1.97□□□□□ -2.09
TOP1YOL006C FAB1P34756 2278 aa1.97□□□□□ -2.09
TOP1YOL006C YSY6P38374 65 aa1.97□□□□□ -2.09
TOP1YOL006C YIL086CP40503 102 aa1.95□□□□□ -2.1
TOP1YOL006C LCL1Q02786 101 aa1.95□□□□□ -2.1
TOP1YOL006C YDR246W-AQ3E763 66 aa1.95□□□□□ -2.1
TOP1YOL006C YDL022C-AP0C5L6 82 aa1.94□□□□□ -2.1
TOP1YOL006C AQY2P0CD90 149 aa1.94□□□□□ -2.1
TOP1YOL006C YHR212W-AP0CX91 67 aa1.94□□□□□ -2.1
TOP1YOL006C PAU7P39545 55 aa1.94□□□□□ -2.1
TOP1YOL006C YOR072WQ08486 104 aa1.94□□□□□ -2.1
TOP1YOL006C SHU1P38751 150 aa1.93□□□□□ -2.1
TOP1YOL006C YMR007WQ03675 126 aa1.92□□□□□ -2.1
TOP1YOL006C YMR122W-AQ3E842 84 aa1.92□□□□□ -2.1
TOP1YOL006C YNL042W-BQ3E7Z2 85 aa1.92□□□□□ -2.1
TOP1YOL006C BPH1P25356 2167 aa1.92□□□□□ -2.1
TOP1YOL006C YAR064WP39563 99 aa1.91□□□□□ -2.1
TOP1YOL006C YKL023C-AQ2V2P3 75 aa1.91□□□□□ -2.1
TOP1YOL006C MGR2Q02889 113 aa1.9□□□□□ -2.1
TOP1YOL006C HUG1Q6Q5K6 68 aa1.9□□□□□ -2.1
TOP1YOL006C YOR032W-AQ8TGS1 66 aa1.9□□□□□ -2.1
TOP1YOL006C FMP27Q06179 2628 aa1.9□□□□□ -2.1
TOP1YOL006C YOL013W-AP0C272 63 aaPredicted RBP1.9□□□□□ -2.11
TOP1YOL006C YBR201C-AQ2V2Q3 67 aa1.9□□□□□ -2.11
TOP1YOL006C VPS13Q07878 3144 aa1.9□□□□□ -2.11
TOP1YOL006C YCR001WP25347 104 aa1.89□□□□□ -2.11
TOP1YOL006C MVB12P42939 101 aa1.89□□□□□ -2.11
TOP1YOL006C YKL018C-AQ3E7A7 99 aa1.89□□□□□ -2.11
TOP1YOL006C GIS2P53849 153 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
TOP1YOL006C Q0032Q9ZZX7 96 aa1.89□□□□□ -2.11
TOP1YOL006C SGF11Q03067 99 aa1.88□□□□□ -2.11
TOP1YOL006C YDR034W-BQ6Q5X2 51 aa1.88□□□□□ -2.11
TOP1YOL006C SEC16P48415 2195 aaKnown RBP1.87□□□□□ -2.11
TOP1YOL006C ATP18P81450 59 aa1.86□□□□□ -2.11
TOP1YOL006C ATP17Q06405 101 aa1.86□□□□□ -2.11
TOP1YOL006C YOR034C-AQ3E735 80 aa1.86□□□□□ -2.11
TOP1YOL006C SEN1Q00416 2231 aaKnown RBP1.86□□□□□ -2.11
TOP1YOL006C YDR182W-AQ3E796 67 aa1.86□□□□□ -2.11
TOP1YOL006C YJR128WP47162 119 aa1.85□□□□□ -2.11
TOP1YOL006C HFA1P32874 2273 aa1.85□□□□□ -2.11
TOP1YOL006C POL2P21951 2222 aaKnown RBP1.85□□□□□ -2.11
TOP1YOL006C YNL190WP53872 204 aa1.84□□□□□ -2.11
TOP1YOL006C YOL097W-AQ3E7Y9 61 aa1.84□□□□□ -2.12
TOP1YOL006C BLM10P43583 2143 aa1.83□□□□□ -2.12
TOP1YOL006C RPS30AP0CX33 63 aaKnown RBP1.83□□□□□ -2.12
TOP1YOL006C RPS30BP0CX34 63 aaKnown RBP1.83□□□□□ -2.12
TOP1YOL006C COX7P10174 60 aa1.83□□□□□ -2.12
TOP1YOL006C YIL102CP40488 101 aa1.83□□□□□ -2.12
TOP1YOL006C BEM2P39960 2167 aaKnown RBP1.83□□□□□ -2.12
TOP1YOL006C HUB1Q6Q546 73 aa1.82□□□□□ -2.12
TOP1YOL006C EDC1P53080 175 aaPredicted RBP1.82□□□□□ -2.12
TOP1YOL006C SDH6Q3E785 79 aa1.81□□□□□ -2.12
TOP1YOL006C HHY1P39982 102 aa1.79□□□□□ -2.12
TOP1YOL006C YMR141CP40211 102 aa1.78□□□□□ -2.12
TOP1YOL006C YOL166W-AQ8TGJ1 51 aa1.78□□□□□ -2.12
TOP1YOL006C YPR108W-AQ3E7B3 70 aa1.77□□□□□ -2.13
TOP1YOL006C YOR192C-CQ3E736 78 aa1.75□□□□□ -2.13
TOP1YOL006C RPL38P49167 78 aaKnown RBP1.75□□□□□ -2.13
TOP1YOL006C NUP192P47054 1683 aa1.75□□□□□ -2.13
TOP1YOL006C YBR072C-AQ3E794 53 aa1.74□□□□□ -2.13
TOP1YOL006C YHR213W-BQ8TGK1 99 aa1.74□□□□□ -2.13
TOP1YOL006C RPC10P40422 70 aa1.73□□□□□ -2.13
TOP1YOL006C YLR146W-AQ2V2P1 62 aa1.73□□□□□ -2.13
TOP1YOL006C YJR107C-AP0CT86 78 aa1.72□□□□□ -2.13
TOP1YOL006C YBR032WP38223 100 aa1.71□□□□□ -2.14
TOP1YOL006C HUA1P40325 198 aa1.7□□□□□ -2.14
TOP1YOL006C FIG2P25653 1609 aa1.7□□□□□ -2.14
TOP1YOL006C YBL039W-BP0C268 59 aa1.69□□□□□ -2.14
TOP1YOL006C YMR001C-AQ8TGS9 76 aa1.69□□□□□ -2.14
TOP1YOL006C URA2P07259 2214 aaKnown RBP1.69□□□□□ -2.14
TOP1YOL006C HKR1P41809 1802 aa1.69□□□□□ -2.14
TOP1YOL006C AUA1P32450 94 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms