RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C ARC15P40518 154 aaRIP-Chip data4□□□□□ -1.77not detected
VPS1YKR001C YDR182W-AQ3E796 67 aa4□□□□□ -1.77
VPS1YKR001C PAU7P39545 55 aa4□□□□□ -1.77
VPS1YKR001C COX23P38824 151 aa3.99□□□□□ -1.77
VPS1YKR001C URM1P40554 99 aaPredicted RBP3.99□□□□□ -1.77
VPS1YKR001C NOP10Q6Q547 58 aaPredicted RBP3.99□□□□□ -1.77
VPS1YKR001C YGL149WP53116 101 aa3.98□□□□□ -1.77
VPS1YKR001C YJL197C-AP0C5P0 93 aa3.98□□□□□ -1.77
VPS1YKR001C HOT13P36078 116 aa3.98□□□□□ -1.77
VPS1YKR001C IRC21Q04772 201 aa3.98□□□□□ -1.77
VPS1YKR001C YLR194CQ05777 254 aa3.97□□□□□ -1.77
VPS1YKR001C YIL156W-BQ2V2P4 73 aa3.97□□□□□ -1.77
VPS1YKR001C RPL39P04650 51 aa3.97□□□□□ -1.77
VPS1YKR001C YOL166W-AQ8TGJ1 51 aa3.97□□□□□ -1.77
VPS1YKR001C RTC6O14464 93 aa3.96□□□□□ -1.78
VPS1YKR001C RPS30AP0CX33 63 aaKnown RBP3.96□□□□□ -1.78
VPS1YKR001C RPS30BP0CX34 63 aaKnown RBP3.96□□□□□ -1.78
VPS1YKR001C COX14P39103 70 aa3.96□□□□□ -1.78
VPS1YKR001C YCR095W-AQ3E787 52 aa3.95□□□□□ -1.78
VPS1YKR001C KRE9P39005 276 aa3.95□□□□□ -1.78
VPS1YKR001C COA3Q3E7B2 85 aa3.95□□□□□ -1.78
VPS1YKR001C YKR032WP36127 104 aa3.94□□□□□ -1.78
VPS1YKR001C HUA1P40325 198 aa3.94□□□□□ -1.78
VPS1YKR001C PRM7Q12459 698 aa3.94□□□□□ -1.78
VPS1YKR001C MRX7P53869 86 aa3.93□□□□□ -1.78
VPS1YKR001C YDR010CQ12426 110 aa3.93□□□□□ -1.78
VPS1YKR001C YOL029CQ08187 201 aa3.92□□□□□ -1.78
VPS1YKR001C YPR013CQ12145 317 aa3.92□□□□□ -1.78
VPS1YKR001C HMRA2P0CY13 119 aa3.92□□□□□ -1.78
VPS1YKR001C SNA2P56508 79 aa3.92□□□□□ -1.78
VPS1YKR001C MGR2Q02889 113 aa3.92□□□□□ -1.78
VPS1YKR001C POR2P40478 281 aa3.91□□□□□ -1.78
VPS1YKR001C YER078W-AQ3E7A2 54 aa3.91□□□□□ -1.78
VPS1YKR001C HUG1Q6Q5K6 68 aa3.91□□□□□ -1.78
VPS1YKR001C SHU1P38751 150 aa3.9□□□□□ -1.79
VPS1YKR001C YOR034C-AQ3E735 80 aa3.9□□□□□ -1.79
VPS1YKR001C YNL190WP53872 204 aa3.89□□□□□ -1.79
VPS1YKR001C QCR8P08525 94 aa3.89□□□□□ -1.79
VPS1YKR001C YMR244WQ04018 355 aa3.89□□□□□ -1.79
VPS1YKR001C IGD1P43598 195 aa3.88□□□□□ -1.79
VPS1YKR001C TOM7P53507 60 aa3.88□□□□□ -1.79
VPS1YKR001C BSC4P53841 131 aa3.88□□□□□ -1.79
VPS1YKR001C YDR114CQ04597 100 aa3.88□□□□□ -1.79
VPS1YKR001C YLR122CQ12312 125 aa3.88□□□□□ -1.79
VPS1YKR001C YNL042W-BQ3E7Z2 85 aa3.88□□□□□ -1.79
VPS1YKR001C FIT2Q08906 153 aa3.87□□□□□ -1.79
VPS1YKR001C YPR108W-AQ3E7B3 70 aa3.87□□□□□ -1.79
VPS1YKR001C YMR105W-AQ8TGS8 64 aa3.87□□□□□ -1.79
VPS1YKR001C MRPS12P53732 153 aa3.86□□□□□ -1.79
VPS1YKR001C YHR125WP38831 101 aa3.86□□□□□ -1.79
VPS1YKR001C RPS11AP0CX47 156 aaKnown RBP3.85□□□□□ -1.79
VPS1YKR001C RPS11BP0CX48 156 aaKnown RBP3.85□□□□□ -1.79
VPS1YKR001C TOS6P48560 102 aa3.85□□□□□ -1.79
VPS1YKR001C YLR236CA0A023PZG4 107 aa3.85□□□□□ -1.79
VPS1YKR001C YCR022CP25620 114 aa3.85□□□□□ -1.79
VPS1YKR001C YBR027CP38220 110 aa3.85□□□□□ -1.79
VPS1YKR001C YJR107C-AP0CT86 78 aa3.83□□□□□ -1.8
VPS1YKR001C YMR254CQ04838 102 aa3.83□□□□□ -1.8
VPS1YKR001C HUB1Q6Q546 73 aa3.82□□□□□ -1.8
VPS1YKR001C DAD4P69851 72 aa3.81□□□□□ -1.8
VPS1YKR001C YBR219CP38317 127 aa3.8□□□□□ -1.8
VPS1YKR001C RPL38P49167 78 aaKnown RBP3.8□□□□□ -1.8
VPS1YKR001C ECM19Q06011 112 aa3.8□□□□□ -1.8
VPS1YKR001C CMC4Q3E7A9 73 aa3.8□□□□□ -1.8
VPS1YKR001C CCW12Q12127 133 aa3.8□□□□□ -1.8
VPS1YKR001C YCR001WP25347 104 aa3.79□□□□□ -1.8
VPS1YKR001C YJR085CP47131 105 aaKnown RBP3.79□□□□□ -1.8
VPS1YKR001C YMR141CP40211 102 aa3.79□□□□□ -1.8
VPS1YKR001C ATP17Q06405 101 aa3.78□□□□□ -1.8
VPS1YKR001C YHR032W-AP0C5N6 59 aa3.77□□□□□ -1.81
VPS1YKR001C ATP18P81450 59 aa3.77□□□□□ -1.81
VPS1YKR001C YOR008C-AQ3E7B9 74 aa3.77□□□□□ -1.81
VPS1YKR001C YHR212W-AP0CX91 67 aa3.75□□□□□ -1.81
VPS1YKR001C YEL014CP39999 101 aa3.75□□□□□ -1.81
VPS1YKR001C AQY2P0CD90 149 aa3.74□□□□□ -1.81
VPS1YKR001C AUA1P32450 94 aa3.74□□□□□ -1.81
VPS1YKR001C HOR7Q05827 59 aa3.74□□□□□ -1.81
VPS1YKR001C YIL102CP40488 101 aa3.74□□□□□ -1.81
VPS1YKR001C YDR115WQ04598 105 aa3.73□□□□□ -1.81
VPS1YKR001C YMR001C-AQ8TGS9 76 aa3.73□□□□□ -1.81
VPS1YKR001C YLR157W-DP0CE99 70 aa3.72□□□□□ -1.81
VPS1YKR001C YDR210WQ03482 75 aa3.72□□□□□ -1.81
VPS1YKR001C YGL258W-AQ3E740 77 aa3.72□□□□□ -1.81
VPS1YKR001C YFR009W-AP0C5M9 85 aa3.71□□□□□ -1.81
VPS1YKR001C YNL122CP53921 115 aaPredicted RBP3.71□□□□□ -1.81
VPS1YKR001C YPR195CQ06594 109 aa3.71□□□□□ -1.81
VPS1YKR001C YGL014C-AP0C5N1 53 aa3.71□□□□□ -1.82
VPS1YKR001C LCL2Q08045 131 aa3.71□□□□□ -1.82
VPS1YKR001C YPR010C-AA5Z2X5 72 aa3.7□□□□□ -1.82
VPS1YKR001C SDH6Q3E785 79 aa3.7□□□□□ -1.82
VPS1YKR001C YLR342W-AQ3E810 57 aa3.7□□□□□ -1.82
VPS1YKR001C SGF11Q03067 99 aa3.68□□□□□ -1.82
VPS1YKR001C COX8P04039 78 aa3.67□□□□□ -1.82
VPS1YKR001C YJL027CP47063 138 aaPredicted RBP3.67□□□□□ -1.82
VPS1YKR001C YJR146WP47174 117 aa3.66□□□□□ -1.82
VPS1YKR001C YMR122W-AQ3E842 84 aa3.66□□□□□ -1.82
VPS1YKR001C YOL013W-AP0C272 63 aaPredicted RBP3.65□□□□□ -1.82
VPS1YKR001C RPL33BP41056 107 aaKnown RBP3.64□□□□□ -1.83
VPS1YKR001C YAL067W-AQ8TGK6 75 aa3.64□□□□□ -1.83
VPS1YKR001C YEL008WP40001 126 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms