RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W AIM11P87275 137 aa2.74□□□□□ -1.97
PRP40YKL012W YLR194CQ05777 254 aa2.74□□□□□ -1.97
PRP40YKL012W BPH1P25356 2167 aa2.74□□□□□ -1.97
PRP40YKL012W TOM6P33448 61 aa2.74□□□□□ -1.97
PRP40YKL012W SED1Q01589 338 aa2.74□□□□□ -1.97
PRP40YKL012W YPL038W-AQ3E7B4 63 aa2.74□□□□□ -1.97
PRP40YKL012W YLR342W-AQ3E810 57 aa2.74□□□□□ -1.97
PRP40YKL012W SPI1P40092 148 aa2.73□□□□□ -1.97
PRP40YKL012W AIM19P40502 157 aa2.73□□□□□ -1.97
PRP40YKL012W RPL33AP05744 107 aaKnown RBP2.72□□□□□ -1.97
PRP40YKL012W YHR213WP0CI67 198 aa2.72□□□□□ -1.97
PRP40YKL012W IMP2P46972 177 aa2.72□□□□□ -1.97
PRP40YKL012W YDR381C-AQ3E6R5 114 aa2.72□□□□□ -1.97
PRP40YKL012W YBR056W-AI2HB52 66 aa2.72□□□□□ -1.97
PRP40YKL012W YNL190WP53872 204 aa2.72□□□□□ -1.97
PRP40YKL012W YOR008C-AQ3E7B9 74 aa2.72□□□□□ -1.97
PRP40YKL012W YGL014C-AP0C5N1 53 aa2.71□□□□□ -1.98
PRP40YKL012W YLR042CQ07990 161 aa2.7□□□□□ -1.98
PRP40YKL012W URA2P07259 2214 aaKnown RBP2.7□□□□□ -1.98
PRP40YKL012W CCW14O13547 238 aa2.69□□□□□ -1.98
PRP40YKL012W YSY6P38374 65 aa2.69□□□□□ -1.98
PRP40YKL012W KTI11Q3E840 82 aa2.69□□□□□ -1.98
PRP40YKL012W HUR1P45820 110 aa2.69□□□□□ -1.98
PRP40YKL012W MRPS12P53732 153 aa2.69□□□□□ -1.98
PRP40YKL012W YCL048W-AQ2V2Q2 79 aa2.68□□□□□ -1.98
PRP40YKL012W YOR376W-AQ3E805 51 aa2.68□□□□□ -1.98
PRP40YKL012W MPC2P38857 129 aa2.67□□□□□ -1.98
PRP40YKL012W YER187WP40102 141 aa2.67□□□□□ -1.98
PRP40YKL012W KSH1Q8TGJ3 72 aa2.66□□□□□ -1.98
PRP40YKL012W PRP8P33334 2413 aaKnown RBP2.66□□□□□ -1.98
PRP40YKL012W YGR025WP53216 100 aa2.66□□□□□ -1.98
PRP40YKL012W YMR175W-AQ3E766 64 aa2.66□□□□□ -1.98
PRP40YKL012W YLR285C-AQ3E771 56 aa2.66□□□□□ -1.98
PRP40YKL012W YMR122CQ03879 124 aa2.65□□□□□ -1.99
PRP40YKL012W SHU1P38751 150 aa2.64□□□□□ -1.99
PRP40YKL012W YAR064WP39563 99 aa2.64□□□□□ -1.99
PRP40YKL012W YGR164WP53291 111 aa2.64□□□□□ -1.99
PRP40YKL012W YOR034C-AQ3E735 80 aa2.64□□□□□ -1.99
PRP40YKL012W MEC1P38111 2368 aa2.63□□□□□ -1.99
PRP40YKL012W RTC6O14464 93 aa2.63□□□□□ -1.99
PRP40YKL012W UBC4P15731 148 aa2.63□□□□□ -1.99
PRP40YKL012W MRPL38P35996 138 aaPredicted RBP2.63□□□□□ -1.99
PRP40YKL012W POR2P40478 281 aa2.63□□□□□ -1.99
PRP40YKL012W IRC21Q04772 201 aa2.63□□□□□ -1.99
PRP40YKL012W CCW12Q12127 133 aa2.63□□□□□ -1.99
PRP40YKL012W YBR200W-AQ3E755 54 aa2.63□□□□□ -1.99
PRP40YKL012W YDR246W-AQ3E763 66 aa2.63□□□□□ -1.99
PRP40YKL012W YJR107C-AP0CT86 78 aa2.61□□□□□ -1.99
PRP40YKL012W YAR029WP39549 74 aa2.61□□□□□ -1.99
PRP40YKL012W AIM4P38305 123 aaPredicted RBP2.61□□□□□ -1.99
PRP40YKL012W YIR020CP40575 100 aa2.6□□□□□ -1.99
PRP40YKL012W EDC1P53080 175 aaPredicted RBP2.6□□□□□ -1.99
PRP40YKL012W ERI1P62651 68 aaKnown RBP2.6□□□□□ -1.99
PRP40YKL012W RSM19P53733 91 aaPredicted RBP2.59□□□□□ -1.99
PRP40YKL012W ICY1Q04329 127 aa2.59□□□□□ -1.99
PRP40YKL012W LCL2Q08045 131 aa2.59□□□□□ -1.99
PRP40YKL012W RRT15Q3E811 62 aa2.59□□□□□ -2
PRP40YKL012W RPL36BO14455 100 aaKnown RBP2.58□□□□□ -2
PRP40YKL012W RPL36AP05745 100 aaPredicted RBP2.58□□□□□ -2
PRP40YKL012W YFR035CP43608 114 aa2.58□□□□□ -2
PRP40YKL012W RPL38P49167 78 aaKnown RBP2.58□□□□□ -2
PRP40YKL012W YNL122CP53921 115 aaPredicted RBP2.58□□□□□ -2
PRP40YKL012W TOR1P35169 2470 aa2.57□□□□□ -2
PRP40YKL012W YCR001WP25347 104 aa2.57□□□□□ -2
PRP40YKL012W YAL065CO13511 128 aa2.56□□□□□ -2
PRP40YKL012W YIL102CP40488 101 aa2.56□□□□□ -2
PRP40YKL012W ATP18P81450 59 aa2.56□□□□□ -2
PRP40YKL012W NUM1Q00402 2748 aa2.56□□□□□ -2
PRP40YKL012W YOR011W-AQ3E807 68 aa2.56□□□□□ -2
PRP40YKL012W NOP10Q6Q547 58 aaPredicted RBP2.56□□□□□ -2
PRP40YKL012W RSM18P40033 138 aa2.56□□□□□ -2
PRP40YKL012W ICS3P47034 131 aa2.56□□□□□ -2
PRP40YKL012W YOR314WQ12506 109 aa2.56□□□□□ -2
PRP40YKL012W MIC10Q96VH5 97 aa2.56□□□□□ -2
PRP40YKL012W YOL013W-AP0C272 63 aaPredicted RBP2.55□□□□□ -2
PRP40YKL012W YLL006W-AQ3E814 58 aa2.55□□□□□ -2
PRP40YKL012W Q0297Q9ZZV8 51 aa2.55□□□□□ -2
PRP40YKL012W YFR009W-AP0C5M9 85 aa2.54□□□□□ -2
PRP40YKL012W TDA2P40045 126 aa2.54□□□□□ -2
PRP40YKL012W PMP3P87284 55 aa2.54□□□□□ -2
PRP40YKL012W YGR121W-AQ3E816 71 aa2.54□□□□□ -2
PRP40YKL012W YHL005CP38752 130 aa2.53□□□□□ -2
PRP40YKL012W YDR182W-AQ3E796 67 aa2.53□□□□□ -2
PRP40YKL012W YOL166W-AQ8TGJ1 51 aa2.53□□□□□ -2
PRP40YKL012W HOR7Q05827 59 aa2.52□□□□□ -2.01
PRP40YKL012W RPS30AP0CX33 63 aaKnown RBP2.51□□□□□ -2.01
PRP40YKL012W RPS30BP0CX34 63 aaKnown RBP2.51□□□□□ -2.01
PRP40YKL012W YJL009WP47078 108 aa2.5□□□□□ -2.01
PRP40YKL012W YOR072WQ08486 104 aa2.5□□□□□ -2.01
PRP40YKL012W YKL065W-AQ2V2P2 73 aa2.5□□□□□ -2.01
PRP40YKL012W YMR122W-AQ3E842 84 aa2.5□□□□□ -2.01
PRP40YKL012W YGR035W-AQ45U48 73 aa2.5□□□□□ -2.01
PRP40YKL012W UTP20P35194 2493 aaKnown RBP2.5□□□□□ -2.01
PRP40YKL012W RPS11AP0CX47 156 aaKnown RBP2.49□□□□□ -2.01
PRP40YKL012W RPS11BP0CX48 156 aaKnown RBP2.49□□□□□ -2.01
PRP40YKL012W OST5Q92316 86 aa2.49□□□□□ -2.01
PRP40YKL012W RPL29P05747 59 aaPredicted RBP2.48□□□□□ -2.01
PRP40YKL012W YER188C-AP0C0V2 99 aa2.48□□□□□ -2.01
PRP40YKL012W COX23P38824 151 aa2.47□□□□□ -2.01
PRP40YKL012W YPR010C-AA5Z2X5 72 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms