RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C MDS3P53094 1487 aa-1.57□□□□□ -2.66
CUP1-2YHR055C POC4Q12245 148 aaPredicted RBP-1.58□□□□□ -2.66
CUP1-2YHR055C YOR343CQ12484 108 aa-1.58□□□□□ -2.66
CUP1-2YHR055C SMC4Q12267 1418 aa-1.58□□□□□ -2.66
CUP1-2YHR055C IRC20Q06554 1556 aa-1.59□□□□□ -2.66
CUP1-2YHR055C RPS27AP35997 82 aaKnown RBP-1.59□□□□□ -2.66
CUP1-2YHR055C YDR524C-BQ3E6R4 66 aa-1.59□□□□□ -2.66
CUP1-2YHR055C PAU23Q07987 124 aa-1.61□□□□□ -2.67
CUP1-2YHR055C PAU17Q12370 124 aa-1.61□□□□□ -2.67
CUP1-2YHR055C MHF2Q3E829 80 aa-1.61□□□□□ -2.67
CUP1-2YHR055C APC1P53886 1748 aa-1.62□□□□□ -2.67
CUP1-2YHR055C MSL1P40567 111 aaPredicted RBP-1.62□□□□□ -2.67
CUP1-2YHR055C FYV7Q12247 151 aa-1.63□□□□□ -2.67
CUP1-2YHR055C SUS1Q6WNK7 96 aa-1.64□□□□□ -2.67
CUP1-2YHR055C POL1P13382 1468 aa-1.64□□□□□ -2.67
CUP1-2YHR055C KOG1P38873 1557 aa-1.64□□□□□ -2.67
CUP1-2YHR055C YDR119W-AQ2V2P9 66 aa-1.65□□□□□ -2.67
CUP1-2YHR055C TY3B-GQ99315 1547 aa-1.66□□□□□ -2.67
CUP1-2YHR055C SCP1Q08873 200 aa-1.66□□□□□ -2.68
CUP1-2YHR055C NOP10Q6Q547 58 aaPredicted RBP-1.66□□□□□ -2.68
CUP1-2YHR055C YOR394C-AQ8TGJ0 55 aa-1.67□□□□□ -2.68
CUP1-2YHR055C YGL258W-AQ3E740 77 aa-1.68□□□□□ -2.68
CUP1-2YHR055C YLL006W-AQ3E814 58 aa-1.68□□□□□ -2.68
CUP1-2YHR055C YDR042CQ03205 200 aa-1.69□□□□□ -2.68
CUP1-2YHR055C YLR146W-AQ2V2P1 62 aa-1.69□□□□□ -2.68
CUP1-2YHR055C YPL225WQ08971 146 aaKnown RBP-1.7□□□□□ -2.68
CUP1-2YHR055C UTP10P42945 1769 aaKnown RBP-1.7□□□□□ -2.68
CUP1-2YHR055C YOR011W-AQ3E807 68 aa-1.71□□□□□ -2.68
CUP1-2YHR055C GDB1Q06625 1536 aa-1.71□□□□□ -2.68
CUP1-2YHR055C YBR200W-AQ3E755 54 aa-1.72□□□□□ -2.68
CUP1-2YHR055C YOR072W-BQ3E832 53 aa-1.72□□□□□ -2.68
CUP1-2YHR055C VPS15P22219 1454 aa-1.73□□□□□ -2.69
CUP1-2YHR055C YIL156W-BQ2V2P4 73 aa-1.73□□□□□ -2.69
CUP1-2YHR055C YOR105WQ08504 108 aa-1.76□□□□□ -2.69
CUP1-2YHR055C SWR1Q05471 1514 aa-1.76□□□□□ -2.69
CUP1-2YHR055C ATP17Q06405 101 aa-1.77□□□□□ -2.69
CUP1-2YHR055C YBL039W-BP0C268 59 aa-1.78□□□□□ -2.69
CUP1-2YHR055C YDL022C-AP0C5L6 82 aa-1.78□□□□□ -2.69
CUP1-2YHR055C YKL065W-AQ2V2P2 73 aa-1.78□□□□□ -2.69
CUP1-2YHR055C HAP1P0CE41 1502 aa-1.78□□□□□ -2.69
CUP1-2YHR055C RPS27BP38711 82 aa-1.79□□□□□ -2.7
CUP1-2YHR055C YGR146C-AQ8TGT9 53 aa-1.79□□□□□ -2.7
CUP1-2YHR055C CUP1-1P0CX80 61 aa-1.8□□□□□ -2.7
CUP1-2YHR055C CUP1-2P0CX81 61 aa-1.8□□□□□ -2.7
CUP1-2YHR055C YOR314WQ12506 109 aa-1.8□□□□□ -2.7
CUP1-2YHR055C YMR082CQ04276 118 aa-1.82□□□□□ -2.7
CUP1-2YHR055C FIG2P25653 1609 aa-1.82□□□□□ -2.7
CUP1-2YHR055C PDR10P51533 1564 aa-1.83□□□□□ -2.7
CUP1-2YHR055C Q0017Q9ZZX8 53 aa-1.84□□□□□ -2.7
CUP1-2YHR055C SIN3P22579 1536 aa-1.85□□□□□ -2.71
CUP1-2YHR055C YBR230W-AQ3E762 66 aa-1.85□□□□□ -2.71
CUP1-2YHR055C YSP2Q06681 1438 aa-1.88□□□□□ -2.71
CUP1-2YHR055C YMR175W-AQ3E766 64 aa-1.88□□□□□ -2.71
CUP1-2YHR055C YOR192C-CQ3E736 78 aa-1.89□□□□□ -2.71
CUP1-2YHR055C YCL001W-BQ96VH2 84 aa-1.89□□□□□ -2.71
CUP1-2YHR055C QCR9P22289 66 aa-1.91□□□□□ -2.72
CUP1-2YHR055C YGL194C-AQ2V2P6 80 aa-1.92□□□□□ -2.72
CUP1-2YHR055C DNF1P32660 1571 aa-1.93□□□□□ -2.72
CUP1-2YHR055C MMS22Q06164 1454 aa-1.93□□□□□ -2.72
CUP1-2YHR055C HUB1Q6Q546 73 aa-1.93□□□□□ -2.72
CUP1-2YHR055C PAU7P39545 55 aa-1.94□□□□□ -2.72
CUP1-2YHR055C YGR121W-AQ3E816 71 aa-1.94□□□□□ -2.72
CUP1-2YHR055C YOR032W-AQ8TGS1 66 aa-1.94□□□□□ -2.72
CUP1-2YHR055C THO2P53552 1597 aaKnown RBP-1.94□□□□□ -2.72
CUP1-2YHR055C FKS3Q04952 1785 aa-1.95□□□□□ -2.72
CUP1-2YHR055C YGR035W-AQ45U48 73 aa-1.95□□□□□ -2.72
CUP1-2YHR055C SSS1P35179 80 aa-1.96□□□□□ -2.72
CUP1-2YHR055C SPI1P40092 148 aa-1.96□□□□□ -2.72
CUP1-2YHR055C SWM2P40342 146 aa-1.96□□□□□ -2.72
CUP1-2YHR055C YPR145C-AQ2V2P0 78 aa-1.96□□□□□ -2.72
CUP1-2YHR055C YML054C-AQ3E809 52 aa-1.98□□□□□ -2.73
CUP1-2YHR055C ZEO1Q08245 113 aa-1.99□□□□□ -2.73
CUP1-2YHR055C PDR12Q02785 1511 aa-2.01□□□□□ -2.73
CUP1-2YHR055C TIM12P32830 109 aa-2.03□□□□□ -2.73
CUP1-2YHR055C LTE1P07866 1435 aa-2.03□□□□□ -2.73
CUP1-2YHR055C ARO1P08566 1588 aaKnown RBP-2.05□□□□□ -2.74
CUP1-2YHR055C SNQ2P32568 1501 aaKnown RBP-2.06□□□□□ -2.74
CUP1-2YHR055C YCR075W-AQ3E830 75 aa-2.06□□□□□ -2.74
CUP1-2YHR055C ESP1Q03018 1630 aa-2.07□□□□□ -2.74
CUP1-2YHR055C TY1B-DR4Q07793 1604 aa-2.07□□□□□ -2.74
CUP1-2YHR055C NUM1Q00402 2748 aa-2.09□□□□□ -2.74
CUP1-2YHR055C PDR15Q04182 1529 aaKnown RBP-2.1□□□□□ -2.75
CUP1-2YHR055C YLR157W-DP0CE99 70 aa-2.1□□□□□ -2.75
CUP1-2YHR055C CWP2P43497 92 aa-2.1□□□□□ -2.75
CUP1-2YHR055C BCK1Q01389 1478 aa-2.1□□□□□ -2.75
CUP1-2YHR055C MLP1Q02455 1875 aaKnown RBP-2.11□□□□□ -2.75
CUP1-2YHR055C CSF1Q12150 2958 aa-2.12□□□□□ -2.75
CUP1-2YHR055C YOR093CQ12275 1648 aa-2.12□□□□□ -2.75
CUP1-2YHR055C RPL29P05747 59 aaPredicted RBP-2.12□□□□□ -2.75
CUP1-2YHR055C IQG1Q12280 1495 aa-2.13□□□□□ -2.75
CUP1-2YHR055C YDR034C-AP0C289 58 aa-2.13□□□□□ -2.75
CUP1-2YHR055C RPS30AP0CX33 63 aaKnown RBP-2.13□□□□□ -2.75
CUP1-2YHR055C RPS30BP0CX34 63 aaKnown RBP-2.13□□□□□ -2.75
CUP1-2YHR055C ERI1P62651 68 aaKnown RBP-2.13□□□□□ -2.75
CUP1-2YHR055C YMR105W-AQ8TGS8 64 aa-2.13□□□□□ -2.75
CUP1-2YHR055C IML1P47170 1584 aa-2.14□□□□□ -2.75
CUP1-2YHR055C DNF2Q12675 1612 aa-2.14□□□□□ -2.75
CUP1-2YHR055C YOR316C-AQ3E806 69 aa-2.16□□□□□ -2.76
CUP1-2YHR055C RRP5Q05022 1729 aaKnown RBP-2.17□□□□□ -2.76
CUP1-2YHR055C ESC1Q03661 1658 aaKnown RBP-2.19□□□□□ -2.76
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms