RNA–Protein interactions for RNA: YGL180W

ATG1, Transcript of Protein serine/threonine kinase, yeastyeast

Gene ATG1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG1YGL180W URA2P07259 2214 aaKnown RBP2.96□□□□□ -1.94
ATG1YGL180W QCR9P22289 66 aa2.96□□□□□ -1.94
ATG1YGL180W TY4B-HP0C2J7 1802 aa2.95□□□□□ -1.94
ATG1YGL180W BSC4P53841 131 aa2.95□□□□□ -1.94
ATG1YGL180W YGR035W-AQ45U48 73 aa2.95□□□□□ -1.94
ATG1YGL180W YOR034C-AQ3E735 80 aa2.94□□□□□ -1.94
ATG1YGL180W PMD1P32634 1753 aa2.94□□□□□ -1.94
ATG1YGL180W COX12Q01519 83 aa2.94□□□□□ -1.94
ATG1YGL180W YDR246W-AQ3E763 66 aa2.93□□□□□ -1.94
ATG1YGL180W CCW14O13547 238 aa2.92□□□□□ -1.94
ATG1YGL180W YCL048W-AQ2V2Q2 79 aa2.92□□□□□ -1.94
ATG1YGL180W POL2P21951 2222 aaKnown RBP2.91□□□□□ -1.94
ATG1YGL180W TY4B-JP47024 1803 aa2.91□□□□□ -1.94
ATG1YGL180W YNL190WP53872 204 aa2.91□□□□□ -1.94
ATG1YGL180W RPS11AP0CX47 156 aaKnown RBP2.91□□□□□ -1.94
ATG1YGL180W RPS11BP0CX48 156 aaKnown RBP2.91□□□□□ -1.94
ATG1YGL180W FKS3Q04952 1785 aa2.91□□□□□ -1.94
ATG1YGL180W SNF2P22082 1703 aa2.9□□□□□ -1.95
ATG1YGL180W YSY6P38374 65 aa2.89□□□□□ -1.95
ATG1YGL180W EDC1P53080 175 aaPredicted RBP2.89□□□□□ -1.95
ATG1YGL180W YOR192C-CQ3E736 78 aa2.89□□□□□ -1.95
ATG1YGL180W YHR212W-AP0CX91 67 aa2.89□□□□□ -1.95
ATG1YGL180W MOT1P32333 1867 aa2.89□□□□□ -1.95
ATG1YGL180W YGL041C-BQ3E750 60 aa2.88□□□□□ -1.95
ATG1YGL180W LCL1Q02786 101 aa2.88□□□□□ -1.95
ATG1YGL180W YKL065W-AQ2V2P2 73 aa2.88□□□□□ -1.95
ATG1YGL180W MGR2Q02889 113 aa2.87□□□□□ -1.95
ATG1YGL180W PDR5P33302 1511 aaKnown RBP2.87□□□□□ -1.95
ATG1YGL180W SEC16P48415 2195 aaKnown RBP2.86□□□□□ -1.95
ATG1YGL180W YGR240C-AQ3E786 66 aa2.86□□□□□ -1.95
ATG1YGL180W YNL042W-BQ3E7Z2 85 aa2.86□□□□□ -1.95
ATG1YGL180W UTP10P42945 1769 aaKnown RBP2.85□□□□□ -1.95
ATG1YGL180W APC1P53886 1748 aa2.85□□□□□ -1.95
ATG1YGL180W YOL013W-AP0C272 63 aaPredicted RBP2.84□□□□□ -1.95
ATG1YGL180W YMR122W-AQ3E842 84 aa2.82□□□□□ -1.96
ATG1YGL180W AIM19P40502 157 aa2.82□□□□□ -1.96
ATG1YGL180W YBR201C-AQ2V2Q3 67 aa2.82□□□□□ -1.96
ATG1YGL180W SPI1P40092 148 aa2.81□□□□□ -1.96
ATG1YGL180W PAU7P39545 55 aa2.81□□□□□ -1.96
ATG1YGL180W MVB12P42939 101 aa2.81□□□□□ -1.96
ATG1YGL180W GCN2P15442 1659 aa2.79□□□□□ -1.96
ATG1YGL180W RPS30AP0CX33 63 aaKnown RBP2.78□□□□□ -1.96
ATG1YGL180W RPS30BP0CX34 63 aaKnown RBP2.78□□□□□ -1.96
ATG1YGL180W SGF11Q03067 99 aa2.78□□□□□ -1.96
ATG1YGL180W URB1P34241 1764 aaKnown RBP2.77□□□□□ -1.97
ATG1YGL180W RIM15P43565 1770 aa2.77□□□□□ -1.97
ATG1YGL180W Q0032Q9ZZX7 96 aa2.77□□□□□ -1.97
ATG1YGL180W NUP192P47054 1683 aa2.76□□□□□ -1.97
ATG1YGL180W SMX2P40204 77 aaKnown RBP2.76□□□□□ -1.97
ATG1YGL180W HUG1Q6Q5K6 68 aa2.75□□□□□ -1.97
ATG1YGL180W SHU1P38751 150 aa2.74□□□□□ -1.97
ATG1YGL180W YNL122CP53921 115 aaPredicted RBP2.74□□□□□ -1.97
ATG1YGL180W YCR001WP25347 104 aa2.73□□□□□ -1.97
ATG1YGL180W YMR007WQ03675 126 aa2.73□□□□□ -1.97
ATG1YGL180W YKL023C-AQ2V2P3 75 aa2.71□□□□□ -1.98
ATG1YGL180W YIL086CP40503 102 aa2.7□□□□□ -1.98
ATG1YGL180W HHY1P39982 102 aa2.68□□□□□ -1.98
ATG1YGL180W ATP18P81450 59 aa2.68□□□□□ -1.98
ATG1YGL180W YOL166W-AQ8TGJ1 51 aa2.67□□□□□ -1.98
ATG1YGL180W YOR072WQ08486 104 aa2.66□□□□□ -1.98
ATG1YGL180W ATP17Q06405 101 aa2.66□□□□□ -1.98
ATG1YGL180W YJL009WP47078 108 aa2.65□□□□□ -1.99
ATG1YGL180W YAR064WP39563 99 aa2.64□□□□□ -1.99
ATG1YGL180W SDH6Q3E785 79 aa2.64□□□□□ -1.99
ATG1YGL180W YJR128WP47162 119 aa2.62□□□□□ -1.99
ATG1YGL180W RPC10P40422 70 aa2.61□□□□□ -1.99
ATG1YGL180W YDR182W-AQ3E796 67 aa2.61□□□□□ -1.99
ATG1YGL180W YLR146W-AQ2V2P1 62 aa2.59□□□□□ -2
ATG1YGL180W AUA1P32450 94 aa2.57□□□□□ -2
ATG1YGL180W YBR032WP38223 100 aa2.56□□□□□ -2
ATG1YGL180W YPR108W-AQ3E7B3 70 aa2.56□□□□□ -2
ATG1YGL180W FIG2P25653 1609 aa2.56□□□□□ -2
ATG1YGL180W CUP1-1P0CX80 61 aa2.55□□□□□ -2
ATG1YGL180W CUP1-2P0CX81 61 aa2.55□□□□□ -2
ATG1YGL180W HUB1Q6Q546 73 aa2.55□□□□□ -2
ATG1YGL180W YJR107C-AP0CT86 78 aa2.53□□□□□ -2.01
ATG1YGL180W COX7P10174 60 aa2.53□□□□□ -2.01
ATG1YGL180W HUA1P40325 198 aa2.53□□□□□ -2.01
ATG1YGL180W RPL38P49167 78 aaKnown RBP2.53□□□□□ -2.01
ATG1YGL180W YLR157W-DP0CE99 70 aa2.52□□□□□ -2.01
ATG1YGL180W YBL039W-BP0C268 59 aa2.52□□□□□ -2.01
ATG1YGL180W PRP8P33334 2413 aaKnown RBP2.51□□□□□ -2.01
ATG1YGL180W YMR001C-AQ8TGS9 76 aa2.51□□□□□ -2.01
ATG1YGL180W SEN1Q00416 2231 aaKnown RBP2.5□□□□□ -2.01
ATG1YGL180W YIL102CP40488 101 aa2.5□□□□□ -2.01
ATG1YGL180W YMR141CP40211 102 aa2.48□□□□□ -2.01
ATG1YGL180W YBR200W-AQ3E755 54 aa2.47□□□□□ -2.01
ATG1YGL180W YOL097W-AQ3E7Y9 61 aa2.47□□□□□ -2.01
ATG1YGL180W RPL43AP0CX25 92 aaKnown RBP2.46□□□□□ -2.01
ATG1YGL180W RPL43BP0CX26 92 aa2.46□□□□□ -2.01
ATG1YGL180W YHR213W-BQ8TGK1 99 aa2.43□□□□□ -2.02
ATG1YGL180W HKR1P41809 1802 aa2.4□□□□□ -2.02
ATG1YGL180W RPS27AP35997 82 aaKnown RBP2.37□□□□□ -2.03
ATG1YGL180W YOR394C-AQ8TGJ0 55 aa2.35□□□□□ -2.03
ATG1YGL180W YBR072C-AQ3E794 53 aa2.34□□□□□ -2.03
ATG1YGL180W YPR117WQ06116 2489 aa2.34□□□□□ -2.04
ATG1YGL180W YPR010C-AA5Z2X5 72 aa2.33□□□□□ -2.04
ATG1YGL180W YOR011W-AQ3E807 68 aa2.33□□□□□ -2.04
ATG1YGL180W NUM1Q00402 2748 aa2.31□□□□□ -2.04
ATG1YGL180W TAO3P40468 2376 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms