RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	POC4	Q12245	148 aa	Predicted RBP	0.99	□□□□□ -2.25
TFB1	YDR311W	MLP2	P40457	1679 aa		0.99	□□□□□ -2.25
TFB1	YDR311W	RPA12	P32529	125 aa	Known RBP	0.99	□□□□□ -2.25
TFB1	YDR311W	NUP188	P52593	1655 aa	Known RBP	0.98	□□□□□ -2.25
TFB1	YDR311W	YCR085W	P25650	117 aa		0.98	□□□□□ -2.25
TFB1	YDR311W	SNQ2	P32568	1501 aa	Known RBP	0.98	□□□□□ -2.25
TFB1	YDR311W	PDR12	Q02785	1511 aa		0.98	□□□□□ -2.25
TFB1	YDR311W	TY1B-DR3	Q99231	1755 aa		0.98	□□□□□ -2.25
TFB1	YDR311W	VTH1	P40438	1549 aa		0.97	□□□□□ -2.25
TFB1	YDR311W	VTH2	P40890	1549 aa		0.97	□□□□□ -2.25
TFB1	YDR311W	YDR010C	Q12426	110 aa		0.97	□□□□□ -2.25
TFB1	YDR311W	YNL042W-B	Q3E7Z2	85 aa		0.96	□□□□□ -2.26
TFB1	YDR311W	PAU23	Q07987	124 aa		0.95	□□□□□ -2.26
TFB1	YDR311W	PAU17	Q12370	124 aa		0.95	□□□□□ -2.26
TFB1	YDR311W	YOR343C	Q12484	108 aa		0.95	□□□□□ -2.26
TFB1	YDR311W	YPR145C-A	Q2V2P0	78 aa		0.95	□□□□□ -2.26
TFB1	YDR311W	RPC10	P40422	70 aa		0.94	□□□□□ -2.26
TFB1	YDR311W	YBR201C-A	Q2V2Q3	67 aa		0.94	□□□□□ -2.26
TFB1	YDR311W	Q0032	Q9ZZX7	96 aa		0.94	□□□□□ -2.26
TFB1	YDR311W	YMR122W-A	Q3E842	84 aa		0.93	□□□□□ -2.26
TFB1	YDR311W	YAL065C	O13511	128 aa		0.93	□□□□□ -2.26
TFB1	YDR311W	YNL190W	P53872	204 aa		0.93	□□□□□ -2.26
TFB1	YDR311W	YOL164W-A	Q3E7A5	60 aa		0.93	□□□□□ -2.26
TFB1	YDR311W	YHR214C-D	P0CX93	97 aa		0.92	□□□□□ -2.26
TFB1	YDR311W	FPR2	P32472	135 aa		0.92	□□□□□ -2.26
TFB1	YDR311W	PDX3	P38075	228 aa	Known RBP	0.92	□□□□□ -2.26
TFB1	YDR311W	YIL156W-B	Q2V2P4	73 aa		0.92	□□□□□ -2.26
TFB1	YDR311W	NOP10	Q6Q547	58 aa	Predicted RBP	0.92	□□□□□ -2.26
TFB1	YDR311W	GCN1	P33892	2672 aa	Known RBP	0.92	□□□□□ -2.26
TFB1	YDR311W	TEL1	P38110	2787 aa		0.91	□□□□□ -2.26
TFB1	YDR311W	PRP8	P33334	2413 aa	Known RBP	0.91	□□□□□ -2.26
TFB1	YDR311W	TOM6	P33448	61 aa		0.91	□□□□□ -2.26
TFB1	YDR311W	TAO3	P40468	2376 aa		0.9	□□□□□ -2.27
TFB1	YDR311W	RRP5	Q05022	1729 aa	Known RBP	0.89	□□□□□ -2.27
TFB1	YDR311W	TOM1	Q03280	3268 aa		0.88	□□□□□ -2.27
TFB1	YDR311W	BLM10	P43583	2143 aa		0.88	□□□□□ -2.27
TFB1	YDR311W	COX7	P10174	60 aa		0.88	□□□□□ -2.27
TFB1	YDR311W	YOR105W	Q08504	108 aa		0.88	□□□□□ -2.27
TFB1	YDR311W	YDR381C-A	Q3E6R5	114 aa		0.88	□□□□□ -2.27
TFB1	YDR311W	RIM15	P43565	1770 aa		0.88	□□□□□ -2.27
TFB1	YDR311W	YDR034W-B	Q6Q5X2	51 aa		0.87	□□□□□ -2.27
TFB1	YDR311W	TOR2	P32600	2474 aa	Known RBP	0.87	□□□□□ -2.27
TFB1	YDR311W	YJR107C-A	P0CT86	78 aa		0.86	□□□□□ -2.27
TFB1	YDR311W	ATP18	P81450	59 aa		0.86	□□□□□ -2.27
TFB1	YDR311W	YOR314W	Q12506	109 aa		0.86	□□□□□ -2.27
TFB1	YDR311W	UTP20	P35194	2493 aa	Known RBP	0.86	□□□□□ -2.27
TFB1	YDR311W	ECM29	P38737	1868 aa		0.86	□□□□□ -2.27
TFB1	YDR311W	RPL38	P49167	78 aa	Known RBP	0.85	□□□□□ -2.27
TFB1	YDR311W	FIG2	P25653	1609 aa		0.85	□□□□□ -2.27
TFB1	YDR311W	NUP192	P47054	1683 aa		0.85	□□□□□ -2.27
TFB1	YDR311W	APC1	P53886	1748 aa		0.85	□□□□□ -2.27
TFB1	YDR311W	FKS3	Q04952	1785 aa		0.85	□□□□□ -2.27
TFB1	YDR311W	YKL065W-A	Q2V2P2	73 aa		0.85	□□□□□ -2.27
TFB1	YDR311W	YDR119W-A	Q2V2P9	66 aa		0.85	□□□□□ -2.27
TFB1	YDR311W	FAS2	P19097	1887 aa	Known RBP	0.85	□□□□□ -2.27
TFB1	YDR311W	YDL022C-A	P0C5L6	82 aa		0.83	□□□□□ -2.28
TFB1	YDR311W	YNL198C	P40166	100 aa		0.83	□□□□□ -2.28
TFB1	YDR311W	YHR213W-A	Q8TGT4	77 aa		0.83	□□□□□ -2.28
TFB1	YDR311W	MLP1	Q02455	1875 aa	Known RBP	0.83	□□□□□ -2.28
TFB1	YDR311W	LSM2	P38203	95 aa	Known RBP	0.83	□□□□□ -2.28
TFB1	YDR311W	SWM2	P40342	146 aa		0.83	□□□□□ -2.28
TFB1	YDR311W	YGR121W-A	Q3E816	71 aa		0.83	□□□□□ -2.28
TFB1	YDR311W	UTP10	P42945	1769 aa	Known RBP	0.82	□□□□□ -2.28
TFB1	YDR311W	FMP27	Q06179	2628 aa		0.82	□□□□□ -2.28
TFB1	YDR311W	SDH6	Q3E785	79 aa		0.8	□□□□□ -2.28
TFB1	YDR311W	STT4	P37297	1900 aa		0.8	□□□□□ -2.28
TFB1	YDR311W	TIM12	P32830	109 aa		0.79	□□□□□ -2.28
TFB1	YDR311W	YBR016W	P38216	128 aa		0.79	□□□□□ -2.28
TFB1	YDR311W	RPS29B	P41058	56 aa	Known RBP	0.79	□□□□□ -2.28
TFB1	YDR311W	SGF11	Q03067	99 aa		0.79	□□□□□ -2.28
TFB1	YDR311W	BPH1	P25356	2167 aa		0.78	□□□□□ -2.28
TFB1	YDR311W	VPS13	Q07878	3144 aa		0.78	□□□□□ -2.28
TFB1	YDR311W	SEN1	Q00416	2231 aa	Known RBP	0.78	□□□□□ -2.28
TFB1	YDR311W	QCR9	P22289	66 aa		0.78	□□□□□ -2.28
TFB1	YDR311W	YGR035W-A	Q45U48	73 aa		0.77	□□□□□ -2.29
TFB1	YDR311W	MOT1	P32333	1867 aa		0.77	□□□□□ -2.29
TFB1	YDR311W	YPR108W-A	Q3E7B3	70 aa		0.77	□□□□□ -2.29
TFB1	YDR311W	YOL097W-A	Q3E7Y9	61 aa		0.76	□□□□□ -2.29
TFB1	YDR311W	YFR009W-A	P0C5M9	85 aa		0.76	□□□□□ -2.29
TFB1	YDR311W	FLO1	P32768	1537 aa		0.75	□□□□□ -2.29
TFB1	YDR311W	MDN1	Q12019	4910 aa	Known RBP	0.74	□□□□□ -2.29
TFB1	YDR311W	IRA1	P18963	3092 aa		0.74	□□□□□ -2.29
TFB1	YDR311W	YOR032W-A	Q8TGS1	66 aa		0.74	□□□□□ -2.29
TFB1	YDR311W	YKL018C-A	Q3E7A7	99 aa		0.72	□□□□□ -2.29
TFB1	YDR311W	YBR056W-A	I2HB52	66 aa		0.72	□□□□□ -2.29
TFB1	YDR311W	PAI3	P01094	68 aa		0.72	□□□□□ -2.29
TFB1	YDR311W	YBR032W	P38223	100 aa		0.72	□□□□□ -2.29
TFB1	YDR311W	YIL134C-A	Q45U18	67 aa		0.72	□□□□□ -2.29
TFB1	YDR311W	HKR1	P41809	1802 aa		0.71	□□□□□ -2.3
TFB1	YDR311W	PMD1	P32634	1753 aa		0.7	□□□□□ -2.3
TFB1	YDR311W	IRA2	P19158	3079 aa		0.7	□□□□□ -2.3
TFB1	YDR311W	EDC1	P53080	175 aa	Predicted RBP	0.7	□□□□□ -2.3
TFB1	YDR311W	ATP17	Q06405	101 aa		0.7	□□□□□ -2.3
TFB1	YDR311W	ATX1	P38636	73 aa		0.68	□□□□□ -2.3
TFB1	YDR311W	ERI1	P62651	68 aa	Known RBP	0.68	□□□□□ -2.3
TFB1	YDR311W	YFL041W-A	Q3E817	63 aa		0.68	□□□□□ -2.3
TFB1	YDR311W	SSS1	P35179	80 aa		0.68	□□□□□ -2.3
TFB1	YDR311W	PAU7	P39545	55 aa		0.67	□□□□□ -2.3
TFB1	YDR311W	MEC1	P38111	2368 aa		0.66	□□□□□ -2.3
TFB1	YDR311W	SPI1	P40092	148 aa		0.66	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms