RNA–Protein interactions for RNA: YDR239C

YDR239C, Transcript of Protein of unknown function, yeast

Gene YDR239C, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR239C	YDR239C	RPS11A	P0CX47	156 aa	Known RBP	1.8	□□□□□ -2.12
YDR239C	YDR239C	RPS11B	P0CX48	156 aa	Known RBP	1.8	□□□□□ -2.12
YDR239C	YDR239C	YLR236C	A0A023PZG4	107 aa		1.79	□□□□□ -2.12
YDR239C	YDR239C	HUB1	Q6Q546	73 aa		1.79	□□□□□ -2.12
YDR239C	YDR239C	FPR1	P20081	114 aa	Known RBP	1.79	□□□□□ -2.12
YDR239C	YDR239C	YKR032W	P36127	104 aa		1.79	□□□□□ -2.12
YDR239C	YDR239C	YEL014C	P39999	101 aa		1.79	□□□□□ -2.12
YDR239C	YDR239C	TOS6	P48560	102 aa		1.79	□□□□□ -2.12
YDR239C	YDR239C	ATP17	Q06405	101 aa		1.79	□□□□□ -2.12
YDR239C	YDR239C	TOR1	P35169	2470 aa		1.79	□□□□□ -2.12
YDR239C	YDR239C	BPH1	P25356	2167 aa		1.78	□□□□□ -2.12
YDR239C	YDR239C	YCR001W	P25347	104 aa		1.78	□□□□□ -2.12
YDR239C	YDR239C	ECM19	Q06011	112 aa		1.78	□□□□□ -2.12
YDR239C	YDR239C	YOR034C-A	Q3E735	80 aa		1.78	□□□□□ -2.12
YDR239C	YDR239C	CMC4	Q3E7A9	73 aa		1.78	□□□□□ -2.12
YDR239C	YDR239C	YBR219C	P38317	127 aa		1.78	□□□□□ -2.12
YDR239C	YDR239C	YFL067W	P43537	175 aa		1.78	□□□□□ -2.12
YDR239C	YDR239C	MRPS12	P53732	153 aa		1.78	□□□□□ -2.12
YDR239C	YDR239C	YMR254C	Q04838	102 aa		1.78	□□□□□ -2.12
YDR239C	YDR239C	YPR195C	Q06594	109 aa		1.78	□□□□□ -2.12
YDR239C	YDR239C	YNL190W	P53872	204 aa		1.77	□□□□□ -2.13
YDR239C	YDR239C	NUM1	Q00402	2748 aa		1.77	□□□□□ -2.13
YDR239C	YDR239C	TOR2	P32600	2474 aa	Known RBP	1.77	□□□□□ -2.13
YDR239C	YDR239C	YSF3	P0C074	85 aa	Predicted RBP	1.76	□□□□□ -2.13
YDR239C	YDR239C	YJR107C-A	P0CT86	78 aa		1.76	□□□□□ -2.13
YDR239C	YDR239C	YDR210W	Q03482	75 aa		1.76	□□□□□ -2.13
YDR239C	YDR239C	YPR108W-A	Q3E7B3	70 aa		1.76	□□□□□ -2.13
YDR239C	YDR239C	COX8	P04039	78 aa		1.76	□□□□□ -2.13
YDR239C	YDR239C	RPL33B	P41056	107 aa	Known RBP	1.76	□□□□□ -2.13
YDR239C	YDR239C	YDR524C-B	Q3E6R4	66 aa		1.76	□□□□□ -2.13
YDR239C	YDR239C	HUG1	Q6Q5K6	68 aa		1.76	□□□□□ -2.13
YDR239C	YDR239C	FAS1	P07149	2051 aa	Known RBP	1.75	□□□□□ -2.13
YDR239C	YDR239C	TEL1	P38110	2787 aa		1.75	□□□□□ -2.13
YDR239C	YDR239C	YJL027C	P47063	138 aa	Predicted RBP	1.75	□□□□□ -2.13
YDR239C	YDR239C	CCW12	Q12127	133 aa		1.75	□□□□□ -2.13
YDR239C	YDR239C	YAL067W-A	Q8TGK6	75 aa		1.75	□□□□□ -2.13
YDR239C	YDR239C	TOM7	P53507	60 aa		1.74	□□□□□ -2.13
YDR239C	YDR239C	ATP18	P81450	59 aa		1.74	□□□□□ -2.13
YDR239C	YDR239C	YGL014C-A	P0C5N1	53 aa		1.74	□□□□□ -2.13
YDR239C	YDR239C	AQY2	P0CD90	149 aa		1.74	□□□□□ -2.13
YDR239C	YDR239C	HUA1	P40325	198 aa		1.74	□□□□□ -2.13
YDR239C	YDR239C	YNL122C	P53921	115 aa	Predicted RBP	1.73	□□□□□ -2.13
YDR239C	YDR239C	DAD4	P69851	72 aa		1.73	□□□□□ -2.13
YDR239C	YDR239C	LCL2	Q08045	131 aa		1.73	□□□□□ -2.13
YDR239C	YDR239C	YMR001C-A	Q8TGS9	76 aa		1.73	□□□□□ -2.13
YDR239C	YDR239C	FAB1	P34756	2278 aa		1.72	□□□□□ -2.13
YDR239C	YDR239C	RPL38	P49167	78 aa	Known RBP	1.72	□□□□□ -2.13
YDR239C	YDR239C	SDH6	Q3E785	79 aa		1.72	□□□□□ -2.13
YDR239C	YDR239C	YLR157W-D	P0CE99	70 aa		1.72	□□□□□ -2.13
YDR239C	YDR239C	YOR008C-A	Q3E7B9	74 aa		1.72	□□□□□ -2.13
YDR239C	YDR239C	BRR2	P32639	2163 aa	Known RBP	1.72	□□□□□ -2.13
YDR239C	YDR239C	YPR010C-A	A5Z2X5	72 aa		1.71	□□□□□ -2.14
YDR239C	YDR239C	YIL102C	P40488	101 aa		1.71	□□□□□ -2.14
YDR239C	YDR239C	SGF11	Q03067	99 aa		1.71	□□□□□ -2.14
YDR239C	YDR239C	YMR122W-A	Q3E842	84 aa		1.71	□□□□□ -2.14
YDR239C	YDR239C	YFR009W-A	P0C5M9	85 aa		1.7	□□□□□ -2.14
YDR239C	YDR239C	CUP1-1	P0CX80	61 aa		1.7	□□□□□ -2.14
YDR239C	YDR239C	CUP1-2	P0CX81	61 aa		1.7	□□□□□ -2.14
YDR239C	YDR239C	IRA2	P19158	3079 aa		1.7	□□□□□ -2.14
YDR239C	YDR239C	YGL258W-A	Q3E740	77 aa		1.7	□□□□□ -2.14
YDR239C	YDR239C	YGL041C-B	Q3E750	60 aa		1.7	□□□□□ -2.14
YDR239C	YDR239C	SEN1	Q00416	2231 aa	Known RBP	1.69	□□□□□ -2.14
YDR239C	YDR239C	YOL013W-A	P0C272	63 aa	Predicted RBP	1.69	□□□□□ -2.14
YDR239C	YDR239C	YMR141C	P40211	102 aa		1.69	□□□□□ -2.14
YDR239C	YDR239C	YLR342W-A	Q3E810	57 aa		1.69	□□□□□ -2.14
YDR239C	YDR239C	YOL097W-A	Q3E7Y9	61 aa		1.69	□□□□□ -2.14
YDR239C	YDR239C	RPL33A	P05744	107 aa	Known RBP	1.68	□□□□□ -2.14
YDR239C	YDR239C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	1.68	□□□□□ -2.14	not detected
YDR239C	YDR239C	YER084W	P40057	128 aa		1.67	□□□□□ -2.14
YDR239C	YDR239C	YJR146W	P47174	117 aa		1.67	□□□□□ -2.14
YDR239C	YDR239C	YOL085C	Q99345	113 aa		1.67	□□□□□ -2.14
YDR239C	YDR239C	YDL012C	Q12489	107 aa		1.66	□□□□□ -2.14
YDR239C	YDR239C	YBR201C-A	Q2V2Q3	67 aa		1.66	□□□□□ -2.14
YDR239C	YDR239C	YLR255C	O13574	117 aa		1.66	□□□□□ -2.14
YDR239C	YDR239C	YBL039W-B	P0C268	59 aa		1.66	□□□□□ -2.14
YDR239C	YDR239C	YJL144W	P47009	104 aa		1.66	□□□□□ -2.14
YDR239C	YDR239C	FMP27	Q06179	2628 aa		1.66	□□□□□ -2.14
YDR239C	YDR239C	IRA1	P18963	3092 aa		1.66	□□□□□ -2.14
YDR239C	YDR239C	YEL008W	P40001	126 aa		1.65	□□□□□ -2.14
YDR239C	YDR239C	YDR114C	Q04597	100 aa		1.65	□□□□□ -2.14
YDR239C	YDR239C	YHR007C-A	Q07074	71 aa		1.65	□□□□□ -2.14
YDR239C	YDR239C	VAM10	Q08474	114 aa		1.65	□□□□□ -2.14
YDR239C	YDR239C	YGR240C-A	Q3E786	66 aa		1.65	□□□□□ -2.14
YDR239C	YDR239C	Q0032	Q9ZZX7	96 aa		1.65	□□□□□ -2.15
YDR239C	YDR239C	BEM2	P39960	2167 aa	Known RBP	1.64	□□□□□ -2.15
YDR239C	YDR239C	BLM10	P43583	2143 aa		1.64	□□□□□ -2.15
YDR239C	YDR239C	MVB12	P42939	101 aa		1.64	□□□□□ -2.15
YDR239C	YDR239C	YGR025W	P53216	100 aa		1.64	□□□□□ -2.15
YDR239C	YDR239C	YOR011W-A	Q3E807	68 aa		1.64	□□□□□ -2.15
YDR239C	YDR239C	YBR200W-A	Q3E755	54 aa		1.63	□□□□□ -2.15
YDR239C	YDR239C	TAR1	Q8TGM6	124 aa		1.63	□□□□□ -2.15
YDR239C	YDR239C	YLL006W-A	Q3E814	58 aa		1.63	□□□□□ -2.15
YDR239C	YDR239C	YIL086C	P40503	102 aa		1.62	□□□□□ -2.15
YDR239C	YDR239C	SEC16	P48415	2195 aa	Known RBP	1.62	□□□□□ -2.15
YDR239C	YDR239C	YCL042W	P25572	119 aa		1.62	□□□□□ -2.15
YDR239C	YDR239C	AUA1	P32450	94 aa		1.62	□□□□□ -2.15
YDR239C	YDR239C	GCN1	P33892	2672 aa	Known RBP	1.61	□□□□□ -2.15
YDR239C	YDR239C	YHR213W-B	Q8TGK1	99 aa		1.61	□□□□□ -2.15
YDR239C	YDR239C	YOR072W	Q08486	104 aa		1.61	□□□□□ -2.15
YDR239C	YDR239C	COX7	P10174	60 aa		1.59	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms