RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W DDR48P18899 430 aaKnown RBP2.55□□□□□ -2
TSR1YDL060W YHR022CP38763 256 aa2.55□□□□□ -2
TSR1YDL060W YMR105W-AQ8TGS8 64 aa2.55□□□□□ -2
TSR1YDL060W DCV1P43595 202 aa2.54□□□□□ -2
TSR1YDL060W SED1Q01589 338 aa2.54□□□□□ -2
TSR1YDL060W YOR381W-AQ3E804 55 aa2.54□□□□□ -2
TSR1YDL060W YOR008C-AQ3E7B9 74 aa2.54□□□□□ -2
TSR1YDL060W YLR342W-AQ3E810 57 aa2.54□□□□□ -2
TSR1YDL060W LIP1Q03579 150 aa2.53□□□□□ -2
TSR1YDL060W YOL166W-AQ8TGJ1 51 aa2.53□□□□□ -2
TSR1YDL060W UTP20P35194 2493 aaKnown RBP2.53□□□□□ -2
TSR1YDL060W RPL26AP05743 127 aaKnown RBP2.53□□□□□ -2
TSR1YDL060W YFR035CP43608 114 aa2.53□□□□□ -2
TSR1YDL060W RPL26BP53221 127 aaKnown RBP2.53□□□□□ -2
TSR1YDL060W IRC21Q04772 201 aa2.53□□□□□ -2
TSR1YDL060W YGR035W-AQ45U48 73 aa2.53□□□□□ -2
TSR1YDL060W RPL33BP41056 107 aaKnown RBP2.52□□□□□ -2.01
TSR1YDL060W RPL38P49167 78 aaKnown RBP2.52□□□□□ -2.01
TSR1YDL060W YDR010CQ12426 110 aa2.52□□□□□ -2.01
TSR1YDL060W YDR034W-BQ6Q5X2 51 aa2.52□□□□□ -2.01
TSR1YDL060W YOR032W-AQ8TGS1 66 aa2.52□□□□□ -2.01
TSR1YDL060W YAL065CO13511 128 aa2.51□□□□□ -2.01
TSR1YDL060W YEL008WP40001 126 aa2.51□□□□□ -2.01
TSR1YDL060W RGM1Q00453 211 aa2.51□□□□□ -2.01
TSR1YDL060W YJR107C-AP0CT86 78 aa2.5□□□□□ -2.01
TSR1YDL060W YBR219CP38317 127 aa2.5□□□□□ -2.01
TSR1YDL060W SIP18P50263 79 aa2.5□□□□□ -2.01
TSR1YDL060W YMR122CQ03879 124 aa2.5□□□□□ -2.01
TSR1YDL060W YPR013CQ12145 317 aa2.5□□□□□ -2.01
TSR1YDL060W YBR200W-AQ3E755 54 aa2.5□□□□□ -2.01
TSR1YDL060W YFR009W-AP0C5M9 85 aa2.5□□□□□ -2.01
TSR1YDL060W RPS30AP0CX33 63 aaKnown RBP2.5□□□□□ -2.01
TSR1YDL060W RPS30BP0CX34 63 aaKnown RBP2.5□□□□□ -2.01
TSR1YDL060W NUM1Q00402 2748 aa2.49□□□□□ -2.01
TSR1YDL060W YLR236CA0A023PZG4 107 aa2.49□□□□□ -2.01
TSR1YDL060W YHL005CP38752 130 aa2.49□□□□□ -2.01
TSR1YDL060W RSM18P40033 138 aa2.49□□□□□ -2.01
TSR1YDL060W POR2P40478 281 aa2.49□□□□□ -2.01
TSR1YDL060W YPR153WQ06537 140 aa2.49□□□□□ -2.01
TSR1YDL060W YIL156W-BQ2V2P4 73 aa2.49□□□□□ -2.01
TSR1YDL060W YER188C-AP0C0V2 99 aa2.47□□□□□ -2.01
TSR1YDL060W SPG1P50088 95 aa2.47□□□□□ -2.01
TSR1YDL060W YAL064WP39711 94 aa2.47□□□□□ -2.01
TSR1YDL060W YDL241WQ07738 123 aa2.47□□□□□ -2.01
TSR1YDL060W YOR314WQ12506 109 aa2.47□□□□□ -2.01
TSR1YDL060W YIR020CP40575 100 aa2.46□□□□□ -2.01
TSR1YDL060W YPR195CQ06594 109 aa2.46□□□□□ -2.01
TSR1YDL060W RDS3Q06835 107 aaPredicted RBP2.46□□□□□ -2.01
TSR1YDL060W ATP18P81450 59 aa2.46□□□□□ -2.02
TSR1YDL060W YCL048W-AQ2V2Q2 79 aa2.46□□□□□ -2.02
TSR1YDL060W MRPL38P35996 138 aaPredicted RBP2.45□□□□□ -2.02
TSR1YDL060W YLL006W-AQ3E814 58 aa2.45□□□□□ -2.02
TSR1YDL060W YOR011W-AQ3E807 68 aa2.44□□□□□ -2.02
TSR1YDL060W OST5Q92316 86 aa2.44□□□□□ -2.02
TSR1YDL060W RPL36BO14455 100 aaKnown RBP2.43□□□□□ -2.02
TSR1YDL060W RPL36AP05745 100 aaPredicted RBP2.43□□□□□ -2.02
TSR1YDL060W YMR122W-AQ3E842 84 aa2.43□□□□□ -2.02
TSR1YDL060W MEC1P38111 2368 aa2.42□□□□□ -2.02
TSR1YDL060W QCR8P08525 94 aa2.41□□□□□ -2.02
TSR1YDL060W YIL102CP40488 101 aa2.41□□□□□ -2.02
TSR1YDL060W SOM1Q05676 74 aa2.41□□□□□ -2.02
TSR1YDL060W COX8P04039 78 aa2.41□□□□□ -2.02
TSR1YDL060W SPC1P46965 94 aa2.41□□□□□ -2.02
TSR1YDL060W VAM10Q08474 114 aa2.41□□□□□ -2.02
TSR1YDL060W YPR010C-AA5Z2X5 72 aa2.4□□□□□ -2.03
TSR1YDL060W RPS11AP0CX47 156 aaKnown RBP2.4□□□□□ -2.03
TSR1YDL060W RPS11BP0CX48 156 aaKnown RBP2.4□□□□□ -2.03
TSR1YDL060W TDA2P40045 126 aa2.4□□□□□ -2.03
TSR1YDL060W FYV5P25585 152 aa2.39□□□□□ -2.03
TSR1YDL060W QCR10P37299 77 aa2.38□□□□□ -2.03
TSR1YDL060W YDR182W-AQ3E796 67 aa2.38□□□□□ -2.03
TSR1YDL060W YBR056W-AI2HB52 66 aa2.38□□□□□ -2.03
TSR1YDL060W TOR1P35169 2470 aa2.37□□□□□ -2.03
TSR1YDL060W CCW12Q12127 133 aa2.37□□□□□ -2.03
TSR1YDL060W YNL042W-BQ3E7Z2 85 aa2.37□□□□□ -2.03
TSR1YDL060W TAR1Q8TGM6 124 aa2.37□□□□□ -2.03
TSR1YDL060W YJL144WP47009 104 aa2.36□□□□□ -2.03
TSR1YDL060W LCL2Q08045 131 aa2.36□□□□□ -2.03
TSR1YDL060W YHR213W-BQ8TGK1 99 aa2.36□□□□□ -2.03
TSR1YDL060W AQY2P0CD90 149 aa2.35□□□□□ -2.03
TSR1YDL060W YOL013W-AP0C272 63 aaPredicted RBP2.34□□□□□ -2.03
TSR1YDL060W YDL012CQ12489 107 aa2.34□□□□□ -2.03
TSR1YDL060W YKL065W-AQ2V2P2 73 aa2.34□□□□□ -2.03
TSR1YDL060W CMC4Q3E7A9 73 aa2.34□□□□□ -2.03
TSR1YDL060W YCR095W-AQ3E787 52 aa2.34□□□□□ -2.04
TSR1YDL060W YNL122CP53921 115 aaPredicted RBP2.33□□□□□ -2.04
TSR1YDL060W YJL133C-AQ3E7A3 74 aa2.33□□□□□ -2.04
TSR1YDL060W YNL146C-AQ3E7Z1 64 aa2.33□□□□□ -2.04
TSR1YDL060W COX23P38824 151 aa2.32□□□□□ -2.04
TSR1YDL060W YLR157W-DP0CE99 70 aa2.32□□□□□ -2.04
TSR1YDL060W YEL014CP39999 101 aa2.31□□□□□ -2.04
TSR1YDL060W AUA1P32450 94 aa2.3□□□□□ -2.04
TSR1YDL060W MVB12P42939 101 aa2.3□□□□□ -2.04
TSR1YDL060W YBR230W-AQ3E762 66 aa2.3□□□□□ -2.04
TSR1YDL060W YHR007C-AQ07074 71 aa2.3□□□□□ -2.04
TSR1YDL060W YMR001C-AQ8TGS9 76 aa2.3□□□□□ -2.04
TSR1YDL060W YGL149WP53116 101 aa2.29□□□□□ -2.04
TSR1YDL060W PMP3P87284 55 aa2.29□□□□□ -2.04
TSR1YDL060W YJL127C-BQ3E828 52 aa2.29□□□□□ -2.04
TSR1YDL060W Q0032Q9ZZX7 96 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms