RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeastyeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCM1YCR065W FIG2P25653 1609 aa2.84□□□□□ -1.96
HCM1YCR065W CDC39P25655 2108 aaKnown RBP2.84□□□□□ -1.96
HCM1YCR065W COA3Q3E7B2 85 aa2.83□□□□□ -1.96
HCM1YCR065W TOR2P32600 2474 aaKnown RBP2.83□□□□□ -1.96
HCM1YCR065W YDR182W-AQ3E796 67 aa2.82□□□□□ -1.96
HCM1YCR065W YKL018C-AQ3E7A7 99 aa2.82□□□□□ -1.96
HCM1YCR065W EDC1P53080 175 aaPredicted RBP2.82□□□□□ -1.96
HCM1YCR065W GCN1P33892 2672 aaKnown RBP2.81□□□□□ -1.96
HCM1YCR065W FAB1P34756 2278 aa2.81□□□□□ -1.96
HCM1YCR065W YGL014C-AP0C5N1 53 aa2.81□□□□□ -1.96
HCM1YCR065W YIL163CP40448 117 aa2.81□□□□□ -1.96
HCM1YCR065W YOR032W-AQ8TGS1 66 aa2.81□□□□□ -1.96
HCM1YCR065W CCW14O13547 238 aa2.8□□□□□ -1.96
HCM1YCR065W YDL022C-AP0C5L6 82 aa2.79□□□□□ -1.96
HCM1YCR065W HKR1P41809 1802 aa2.79□□□□□ -1.96
HCM1YCR065W RPS30AP0CX33 63 aaKnown RBP2.79□□□□□ -1.96
HCM1YCR065W RPS30BP0CX34 63 aaKnown RBP2.79□□□□□ -1.96
HCM1YCR065W AGA2P32781 87 aa2.79□□□□□ -1.96
HCM1YCR065W YNL042W-BQ3E7Z2 85 aa2.78□□□□□ -1.96
HCM1YCR065W YOR034C-AQ3E735 80 aa2.77□□□□□ -1.97
HCM1YCR065W RPS19BP07281 144 aaPredicted RBP2.76□□□□□ -1.97
HCM1YCR065W YSF3P0C074 85 aaPredicted RBP2.76□□□□□ -1.97
HCM1YCR065W RPS11AP0CX47 156 aaKnown RBP2.76□□□□□ -1.97
HCM1YCR065W RPS11BP0CX48 156 aaKnown RBP2.76□□□□□ -1.97
HCM1YCR065W LCL2Q08045 131 aa2.76□□□□□ -1.97
HCM1YCR065W YOL166W-AQ8TGJ1 51 aa2.76□□□□□ -1.97
HCM1YCR065W YPR096CO13587 100 aa2.75□□□□□ -1.97
HCM1YCR065W RPL33AP05744 107 aaKnown RBP2.75□□□□□ -1.97
HCM1YCR065W YJL144WP47009 104 aa2.75□□□□□ -1.97
HCM1YCR065W YNL190WP53872 204 aa2.75□□□□□ -1.97
HCM1YCR065W YDR210WQ03482 75 aa2.75□□□□□ -1.97
HCM1YCR065W YHR007C-AQ07074 71 aa2.74□□□□□ -1.97
HCM1YCR065W YBR219CP38317 127 aa2.73□□□□□ -1.97
HCM1YCR065W CCW12Q12127 133 aa2.73□□□□□ -1.97
HCM1YCR065W YGL041C-BQ3E750 60 aa2.73□□□□□ -1.97
HCM1YCR065W HUB1Q6Q546 73 aa2.73□□□□□ -1.97
HCM1YCR065W BRR2P32639 2163 aaKnown RBP2.73□□□□□ -1.97
HCM1YCR065W YCR001WP25347 104 aa2.73□□□□□ -1.97
HCM1YCR065W YER084WP40057 128 aa2.73□□□□□ -1.97
HCM1YCR065W MRPS12P53732 153 aa2.73□□□□□ -1.97
HCM1YCR065W ATP17Q06405 101 aa2.71□□□□□ -1.98
HCM1YCR065W ACC1Q00955 2233 aaKnown RBP2.71□□□□□ -1.98
HCM1YCR065W FLO1P32768 1537 aa2.7□□□□□ -1.98
HCM1YCR065W YJR146WP47174 117 aa2.7□□□□□ -1.98
HCM1YCR065W YDR034W-BQ6Q5X2 51 aa2.7□□□□□ -1.98
HCM1YCR065W VAM10Q08474 114 aa2.69□□□□□ -1.98
HCM1YCR065W TAR1Q8TGM6 124 aa2.69□□□□□ -1.98
HCM1YCR065W YNL122CP53921 115 aaPredicted RBP2.69□□□□□ -1.98
HCM1YCR065W SGF11Q03067 99 aa2.69□□□□□ -1.98
HCM1YCR065W FMP27Q06179 2628 aa2.68□□□□□ -1.98
HCM1YCR065W YMR122W-AQ3E842 84 aa2.68□□□□□ -1.98
HCM1YCR065W UTP20P35194 2493 aaKnown RBP2.68□□□□□ -1.98
HCM1YCR065W AQY2P0CD90 149 aa2.66□□□□□ -1.98
HCM1YCR065W YDR114CQ04597 100 aa2.66□□□□□ -1.98
HCM1YCR065W MGR2Q02889 113 aa2.66□□□□□ -1.98
HCM1YCR065W YGR240C-AQ3E786 66 aa2.65□□□□□ -1.99
HCM1YCR065W COA2Q3E823 68 aa2.65□□□□□ -1.99
HCM1YCR065W PRP8P33334 2413 aaKnown RBP2.64□□□□□ -1.99
HCM1YCR065W YLR255CO13574 117 aa2.64□□□□□ -1.99
HCM1YCR065W SHU1P38751 150 aa2.64□□□□□ -1.99
HCM1YCR065W RDS3Q06835 107 aaPredicted RBP2.64□□□□□ -1.99
HCM1YCR065W YBR201C-AQ2V2Q3 67 aa2.64□□□□□ -1.99
HCM1YCR065W IRA1P18963 3092 aa2.64□□□□□ -1.99
HCM1YCR065W YEL008WP40001 126 aa2.63□□□□□ -1.99
HCM1YCR065W YMR001C-AQ8TGS9 76 aa2.63□□□□□ -1.99
HCM1YCR065W SEN1Q00416 2231 aaKnown RBP2.63□□□□□ -1.99
HCM1YCR065W YDR524C-BQ3E6R4 66 aa2.62□□□□□ -1.99
HCM1YCR065W SDH6Q3E785 79 aa2.62□□□□□ -1.99
HCM1YCR065W BLM10P43583 2143 aa2.61□□□□□ -1.99
HCM1YCR065W ATP18P81450 59 aa2.61□□□□□ -1.99
HCM1YCR065W YMR007WQ03675 126 aa2.61□□□□□ -1.99
HCM1YCR065W COX9P07255 59 aa2.6□□□□□ -1.99
HCM1YCR065W YLR157W-DP0CE99 70 aa2.6□□□□□ -1.99
HCM1YCR065W YJR107C-AP0CT86 78 aa2.6□□□□□ -1.99
HCM1YCR065W RPL38P49167 78 aaKnown RBP2.6□□□□□ -1.99
HCM1YCR065W MVB12P42939 101 aa2.6□□□□□ -1.99
HCM1YCR065W YOL097W-AQ3E7Y9 61 aa2.6□□□□□ -1.99
HCM1YCR065W Q0032Q9ZZX7 96 aa2.6□□□□□ -1.99
HCM1YCR065W YIL102CP40488 101 aa2.58□□□□□ -2
HCM1YCR065W YIL086CP40503 102 aa2.57□□□□□ -2
HCM1YCR065W IRA2P19158 3079 aa2.57□□□□□ -2
HCM1YCR065W YBL039W-BP0C268 59 aa2.55□□□□□ -2
HCM1YCR065W YMR141CP40211 102 aa2.55□□□□□ -2
HCM1YCR065W TOS6P48560 102 aa2.55□□□□□ -2
HCM1YCR065W LCL1Q02786 101 aa2.55□□□□□ -2
HCM1YCR065W YDL012CQ12489 107 aa2.53□□□□□ -2
HCM1YCR065W BEM2P39960 2167 aaKnown RBP2.53□□□□□ -2.01
HCM1YCR065W YPR010C-AA5Z2X5 72 aa2.52□□□□□ -2.01
HCM1YCR065W YCL042WP25572 119 aa2.52□□□□□ -2.01
HCM1YCR065W YJL009WP47078 108 aa2.52□□□□□ -2.01
HCM1YCR065W YOR072WQ08486 104 aa2.51□□□□□ -2.01
HCM1YCR065W YPR108W-AQ3E7B3 70 aa2.51□□□□□ -2.01
HCM1YCR065W YOL013W-AP0C272 63 aaPredicted RBP2.5□□□□□ -2.01
HCM1YCR065W COX7P10174 60 aa2.5□□□□□ -2.01
HCM1YCR065W HUA1P40325 198 aa2.5□□□□□ -2.01
HCM1YCR065W YBR200W-AQ3E755 54 aa2.5□□□□□ -2.01
HCM1YCR065W YNL146C-AQ3E7Z1 64 aa2.5□□□□□ -2.01
HCM1YCR065W YFR009W-AP0C5M9 85 aa2.48□□□□□ -2.01
HCM1YCR065W YOR011W-AQ3E807 68 aa2.48□□□□□ -2.01
HCM1YCR065W TOM7P53507 60 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms