RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeastyeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP13YBL067C MOT1P32333 1867 aa4.26□□□□□ -1.73
UBP13YBL067C YOR032W-AQ8TGS1 66 aa4.26□□□□□ -1.73
UBP13YBL067C YKL018C-AQ3E7A7 99 aa4.25□□□□□ -1.73
UBP13YBL067C YGL041C-BQ3E750 60 aa4.24□□□□□ -1.73
UBP13YBL067C BCK1Q01389 1478 aa4.24□□□□□ -1.73
UBP13YBL067C YGR240C-AQ3E786 66 aa4.21□□□□□ -1.74
UBP13YBL067C FAB1P34756 2278 aa4.2□□□□□ -1.74
UBP13YBL067C RIM15P43565 1770 aa4.2□□□□□ -1.74
UBP13YBL067C YHR086W-AQ3E746 53 aa4.2□□□□□ -1.74
UBP13YBL067C YSY6P38374 65 aa4.19□□□□□ -1.74
UBP13YBL067C YNL146C-AQ3E7Z1 64 aa4.19□□□□□ -1.74
UBP13YBL067C URB1P34241 1764 aaKnown RBP4.18□□□□□ -1.74
UBP13YBL067C YBT1P32386 1661 aa4.17□□□□□ -1.74
UBP13YBL067C SPI1P40092 148 aa4.17□□□□□ -1.74
UBP13YBL067C YDL012CQ12489 107 aa4.17□□□□□ -1.74
UBP13YBL067C YOR034C-AQ3E735 80 aa4.17□□□□□ -1.74
UBP13YBL067C AIM19P40502 157 aa4.17□□□□□ -1.74
UBP13YBL067C LCL1Q02786 101 aa4.17□□□□□ -1.74
UBP13YBL067C MGR2Q02889 113 aa4.16□□□□□ -1.74
UBP13YBL067C NUP188P52593 1655 aaKnown RBP4.16□□□□□ -1.74
UBP13YBL067C AQY2P0CD90 149 aa4.15□□□□□ -1.74
UBP13YBL067C IML1P47170 1584 aa4.15□□□□□ -1.74
UBP13YBL067C YNL042W-BQ3E7Z2 85 aa4.14□□□□□ -1.75
UBP13YBL067C EDC1P53080 175 aaPredicted RBP4.13□□□□□ -1.75
UBP13YBL067C YNL190WP53872 204 aa4.13□□□□□ -1.75
UBP13YBL067C BLM10P43583 2143 aa4.12□□□□□ -1.75
UBP13YBL067C YMR122W-AQ3E842 84 aa4.1□□□□□ -1.75
UBP13YBL067C VMR1P38735 1592 aa4.1□□□□□ -1.75
UBP13YBL067C BEM2P39960 2167 aaKnown RBP4.09□□□□□ -1.75
UBP13YBL067C POL2P21951 2222 aaKnown RBP4.09□□□□□ -1.75
UBP13YBL067C SEC16P48415 2195 aaKnown RBP4.08□□□□□ -1.76
UBP13YBL067C PAU7P39545 55 aa4.07□□□□□ -1.76
UBP13YBL067C YOR192C-CQ3E736 78 aa4.07□□□□□ -1.76
UBP13YBL067C HFA1P32874 2273 aa4.05□□□□□ -1.76
UBP13YBL067C YBR201C-AQ2V2Q3 67 aa4.05□□□□□ -1.76
UBP13YBL067C YPR096CO13587 100 aa4.02□□□□□ -1.77
UBP13YBL067C MVB12P42939 101 aa4.02□□□□□ -1.77
UBP13YBL067C YHR212W-AP0CX91 67 aa4.01□□□□□ -1.77
UBP13YBL067C RPS30AP0CX33 63 aaKnown RBP4.01□□□□□ -1.77
UBP13YBL067C RPS30BP0CX34 63 aaKnown RBP4.01□□□□□ -1.77
UBP13YBL067C YNL122CP53921 115 aaPredicted RBP4.01□□□□□ -1.77
UBP13YBL067C YKL023C-AQ2V2P3 75 aa4□□□□□ -1.77
UBP13YBL067C SHU1P38751 150 aa3.99□□□□□ -1.77
UBP13YBL067C Q0032Q9ZZX7 96 aa3.99□□□□□ -1.77
UBP13YBL067C SGF11Q03067 99 aa3.99□□□□□ -1.77
UBP13YBL067C YIL086CP40503 102 aa3.98□□□□□ -1.77
UBP13YBL067C YOL013W-AP0C272 63 aaPredicted RBP3.95□□□□□ -1.78
UBP13YBL067C YMR007WQ03675 126 aa3.94□□□□□ -1.78
UBP13YBL067C SMX2P40204 77 aaKnown RBP3.94□□□□□ -1.78
UBP13YBL067C YJL009WP47078 108 aa3.92□□□□□ -1.78
UBP13YBL067C HUG1Q6Q5K6 68 aa3.92□□□□□ -1.78
UBP13YBL067C GCN2P15442 1659 aa3.91□□□□□ -1.78
UBP13YBL067C ATP17Q06405 101 aa3.9□□□□□ -1.78
UBP13YBL067C YOL166W-AQ8TGJ1 51 aa3.9□□□□□ -1.78
UBP13YBL067C ATP18P81450 59 aa3.89□□□□□ -1.79
UBP13YBL067C YCR001WP25347 104 aa3.87□□□□□ -1.79
UBP13YBL067C NUP192P47054 1683 aa3.86□□□□□ -1.79
UBP13YBL067C YDR182W-AQ3E796 67 aa3.86□□□□□ -1.79
UBP13YBL067C URA2P07259 2214 aaKnown RBP3.84□□□□□ -1.8
UBP13YBL067C YOR072WQ08486 104 aa3.82□□□□□ -1.8
UBP13YBL067C YJR128WP47162 119 aa3.8□□□□□ -1.8
UBP13YBL067C SDH6Q3E785 79 aa3.79□□□□□ -1.8
UBP13YBL067C SNF2P22082 1703 aa3.79□□□□□ -1.8
UBP13YBL067C YAR064WP39563 99 aa3.76□□□□□ -1.81
UBP13YBL067C GIS2P53849 153 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81 RIP-Chip
UBP13YBL067C TOM1Q03280 3268 aa3.74□□□□□ -1.81
UBP13YBL067C RPC10P40422 70 aa3.72□□□□□ -1.81
UBP13YBL067C HUB1Q6Q546 73 aa3.72□□□□□ -1.81
UBP13YBL067C COX7P10174 60 aa3.71□□□□□ -1.82
UBP13YBL067C YPR108W-AQ3E7B3 70 aa3.7□□□□□ -1.82
UBP13YBL067C HHY1P39982 102 aa3.69□□□□□ -1.82
UBP13YBL067C AUA1P32450 94 aa3.68□□□□□ -1.82
UBP13YBL067C YLR146W-AQ2V2P1 62 aa3.66□□□□□ -1.82
UBP13YBL067C YOL097W-AQ3E7Y9 61 aa3.66□□□□□ -1.82
UBP13YBL067C YBL039W-BP0C268 59 aa3.63□□□□□ -1.83
UBP13YBL067C YMR001C-AQ8TGS9 76 aa3.62□□□□□ -1.83
UBP13YBL067C YBR032WP38223 100 aa3.62□□□□□ -1.83
UBP13YBL067C YLR157W-DP0CE99 70 aa3.61□□□□□ -1.83
UBP13YBL067C YJR107C-AP0CT86 78 aa3.6□□□□□ -1.83
UBP13YBL067C YBR200W-AQ3E755 54 aa3.59□□□□□ -1.83
UBP13YBL067C YPR117WQ06116 2489 aa3.57□□□□□ -1.84
UBP13YBL067C YMR141CP40211 102 aa3.56□□□□□ -1.84
UBP13YBL067C HUA1P40325 198 aa3.55□□□□□ -1.84
UBP13YBL067C VPS13Q07878 3144 aa3.55□□□□□ -1.84
UBP13YBL067C RPL38P49167 78 aaKnown RBP3.54□□□□□ -1.84
UBP13YBL067C FIG2P25653 1609 aa3.52□□□□□ -1.85
UBP13YBL067C TAO3P40468 2376 aa3.51□□□□□ -1.85
UBP13YBL067C YIL102CP40488 101 aa3.51□□□□□ -1.85
UBP13YBL067C HKR1P41809 1802 aa3.46□□□□□ -1.86
UBP13YBL067C RPS27AP35997 82 aaKnown RBP3.46□□□□□ -1.86
UBP13YBL067C RPL43AP0CX25 92 aaKnown RBP3.45□□□□□ -1.86
UBP13YBL067C RPL43BP0CX26 92 aa3.45□□□□□ -1.86
UBP13YBL067C YBR072C-AQ3E794 53 aa3.45□□□□□ -1.86
UBP13YBL067C TOR1P35169 2470 aa3.44□□□□□ -1.86
UBP13YBL067C YOR011W-AQ3E807 68 aa3.43□□□□□ -1.86
UBP13YBL067C YOR394C-AQ8TGJ0 55 aa3.42□□□□□ -1.86
UBP13YBL067C YHR213W-BQ8TGK1 99 aa3.42□□□□□ -1.86
UBP13YBL067C NUM1Q00402 2748 aa3.38□□□□□ -1.87
UBP13YBL067C TOR2P32600 2474 aaKnown RBP3.37□□□□□ -1.87
UBP13YBL067C FLO1P32768 1537 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms