RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 SNX9Q9Y5X1 595 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 ATRXP46100 2492 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 LAMA5O15230 3695 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 MYO18AQ92614 2054 aaKnown RBP10.69□□□□□ -0.7
PHGDH-222ENST00000641587 PTPRJQ12913 1337 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 SOBPA7XYQ1 873 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 LEFTY2O00292 366 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 PSMA7O14818 248 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 HYAL3O43820 417 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-222ENST00000641587 HUS1O60921 280 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 KIF20AO95235 890 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 IL18RAPO95256 599 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 NFATC1O95644 943 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 CYP17A1P05093 508 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 CHRM1P11229 460 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-222ENST00000641587 CEACAM1P13688 526 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 HDCP19113 662 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 SCP2P22307 547 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 LMO2P25791 158 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 TIE1P35590 1138 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 PPP1R2P41236 205 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 PNPLA4P41247 253 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 PRCPP42785 496 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 PTGER3P43115 390 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 MAPK8P45983 427 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 SLC6A11P48066 632 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 ZNF165P49910 485 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 CASP5P51878 434 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 MYL7Q01449 175 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 STK4Q13043 487 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 CRY1Q16526 586 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 CFAP221Q4G0U5 840 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 EMC10Q5UCC4 262 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 TMEFF1Q8IYR6 380 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 ALLCQ8N6M5 410 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 KIAA0895Q8NCT3 520 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 RNF214Q8ND24 703 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 MYLPFQ96A32 169 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 EXOC4Q96A65 974 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 FNBP1Q96RU3 617 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 CBWD1Q9BRT8 395 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 STRA6Q9BX79 667 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 PDE11AQ9HCR9 933 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 CRTAC1Q9NQ79 661 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 OLFML3Q9NRN5 406 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 TMEM74BQ9NUR3 256 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 SMPD4Q9NXE4 827 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 RBAKQ9NYW8 714 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-222ENST00000641587 ARHGAP26Q9UNA1 814 aa10.68□□□□□ -0.7
PHGDH-222ENST00000641587 PCNX2A6NKB5 2137 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 CELSR3Q9NYQ7 3312 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 PLXND1Q9Y4D7 1925 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 SRRM3A6NNA2 597 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-222ENST00000641587 BECN2A8MW95 431 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 SGK1O00141 431 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 GABRDO14764 452 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 KLF8O95600 359 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-222ENST00000641587 CD44P16070 742 aaKnown RBP10.67□□□□□ -0.7
PHGDH-222ENST00000641587 CSRP1P21291 193 aaKnown RBP10.67□□□□□ -0.7
PHGDH-222ENST00000641587 BDNFP23560 247 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 STX17P56962 302 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 KDSRQ06136 332 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 EHHADHQ08426 723 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 NR1H3Q13133 447 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 PAK1Q13153 545 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 ALCAMQ13740 583 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 TPD52L1Q16890 204 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-222ENST00000641587 SOWAHAQ2M3V2 549 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 TRIM61Q5EBN2 209 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 FILIP1Q7Z7B0 1213 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 GAS2L3Q86XJ1 694 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 NT5DC4Q86YG4 428 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 NELFCDQ8IXH7 590 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 TMEM86AQ8N2M4 240 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 AOPEPQ8N6M6 819 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 LRRC52Q8N7C0 313 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 IL17RCQ8NAC3 791 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 TXNDC5Q8NBS9 432 aaKnown RBP10.67□□□□□ -0.7
PHGDH-222ENST00000641587 GLIS3Q8NEA6 775 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 OLIG1Q8TAK6 271 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 KBTBD7Q8WVZ9 684 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 NELFBQ8WX92 580 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 ZCCHC14Q8WYQ9 949 aaKnown RBP10.67□□□□□ -0.7
PHGDH-222ENST00000641587 SYT15Q9BQS2 421 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 RNF38Q9H0F5 515 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 PCIF1Q9H4Z3 704 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 MBD1Q9UIS9 605 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-222ENST00000641587 KLK13Q9UKR3 277 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 NME7Q9Y5B8 376 aa10.67□□□□□ -0.7
PHGDH-222ENST00000641587 CEP192Q8TEP8 1941 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 UBE4BO95155 1302 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 SPAARA0A1B0GVQ0 90 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 GOLGA6L3A6NEY3 463 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 PPP1R3GB7ZBB8 358 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 GOLGA6L19H0YKK7 550 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 EIF3DO15371 548 aaKnown RBP eCLIP10.66□□□□□ -0.7
PHGDH-222ENST00000641587 PRPF6O94906 941 aaKnown RBP10.66□□□□□ -0.7
PHGDH-222ENST00000641587 TCF3P15923 654 aa10.66□□□□□ -0.7
PHGDH-222ENST00000641587 PCSK1P29120 753 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms