RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TTYH3Q9C0H2 523 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 SLIT3O75094 1523 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 ZBBXA8MT70 800 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 KBTBD13C9JR72 458 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 MICAL2O94851 1124 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 AMPD1P23109 780 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 PHEXP78562 749 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 ZNF268Q14587 947 aaPredicted RBP14.94□□□□□ -0.02
SCARB2-216ENST00000639300 ZBTB41Q5SVQ8 909 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 CD302Q8IX05 232 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 ADAM32Q8TC27 787 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 EDEM1Q92611 657 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 FAM136AQ96C01 138 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 KREMEN1Q96MU8 473 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 VPS33BQ9H267 617 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 CPA4Q9UI42 421 aa14.94□□□□□ -0.02
SCARB2-216ENST00000639300 THPOP40225 353 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 AQP5P55064 265 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 MARSP56192 900 aaKnown RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 RPL10AP62906 217 aaKnown RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 CYTH1Q15438 398 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 C15orf59Q2T9L4 293 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 CHSY1Q86X52 802 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 KIRREL3Q8IZU9 778 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 SPDYE1Q8NFV5 336 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 BHMTQ93088 406 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 CMTM5Q96DZ9 223 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 GCNAQ96QF7 691 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 PCDHB18PQ96TA0 734 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 RIPK3Q9Y572 518 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 TMEM132BQ14DG7 1078 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 SLC35G1Q2M3R5 365 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 ZCWPW2Q504Y3 356 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 MAP1SQ66K74 1059 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 C4orf22Q6V702 233 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 CEP70Q8NHQ1 597 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 DNAJB3Q8WWF6 145 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 CDY2AQ9Y6F7 541 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 CDY1Q9Y6F8 540 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 MTSS1O43312 755 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 FDFT1P37268 417 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 AVPR1AP37288 418 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 PDAP1Q13442 181 aaKnown RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 RNF219Q5W0B1 726 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 GIPC2Q8TF65 315 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 HAUS8Q9BT25 410 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 ING2Q9H160 280 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 ANP32DO95626 131 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 EIF4BP23588 611 aaKnown RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 RRP1BQ14684 758 aaKnown RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 RCN1Q15293 331 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 CNGA3Q16281 694 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 C6orf10Q5SRN2 563 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 RARS2Q5T160 578 aaKnown RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 DUPD1Q68J44 220 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 CES3Q6UWW8 571 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 PLEKHH3Q7Z736 793 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 ABTB1Q969K4 478 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 KCNK16Q96T55 309 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 FRMD8P1Q9BZ68 369 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-216ENST00000639300 KDM4CQ9H3R0 1056 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 ASB7Q9H672 318 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 CHST12Q9NRB3 414 aa14.93□□□□□ -0.02
SCARB2-216ENST00000639300 NDUFS3O75489 264 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 CCNE2O96020 404 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 ATICP31939 592 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 AUHQ13825 339 aaKnown RBP14.92□□□□□ -0.02
SCARB2-216ENST00000639300 VGLL4Q14135 290 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 CAPRIN1Q14444 709 aaKnown RBP14.92□□□□□ -0.02
SCARB2-216ENST00000639300 GRIK4Q16099 956 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 COLGALT1Q8NBJ5 622 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 UNKQ9C0B0 810 aaKnown RBP14.92□□□□□ -0.02
SCARB2-216ENST00000639300 CATSPERBQ9H7T0 1116 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 ERVK-5Q9HDB9 667 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 OLA1Q9NTK5 396 aaKnown RBP14.92□□□□□ -0.02
SCARB2-216ENST00000639300 HES2Q9Y543 173 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 KIF1AQ12756 1690 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 C17orf102A2RUQ5 167 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 AP3B1O00203 1094 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 IRF6O14896 467 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 SKAP2O75563 359 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-216ENST00000639300 ADRA1DP25100 572 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 TKTL1P51854 596 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 MED21Q13503 144 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 PDCD2Q16342 344 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-216ENST00000639300 PACS2Q86VP3 889 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 NUP93Q8N1F7 819 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 EIF1ADQ8N9N8 165 aaKnown RBP14.92□□□□□ -0.02
SCARB2-216ENST00000639300 CELF6Q96J87 481 aaKnown RBP14.92□□□□□ -0.02
SCARB2-216ENST00000639300 WARS2Q9UGM6 360 aaKnown RBP14.92□□□□□ -0.02
SCARB2-216ENST00000639300 RGPD8O14715 1765 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-216ENST00000639300 ROBO3Q96MS0 1386 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 MCF2P10911 925 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 ADCYAP1R1P41586 468 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 CAPSQ13938 189 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 KATNAL2Q8IYT4 538 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 GALNT4Q8N4A0 578 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 CXorf38Q8TB03 319 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 IL1RL2Q9HB29 575 aa14.92□□□□□ -0.02
SCARB2-216ENST00000639300 DNAJC16Q9Y2G8 782 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms